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CmoCh12G013550 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G013550
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRING-box protein 1a-like
Genome locationCmo_Chr12:11680775..11683882
RNA-Seq ExpressionCmoCh12G013550
SyntenyCmoCh12G013550
Gene Ontology termsGO:0016310 - phosphorylation (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0031145 - anaphase-promoting complex-dependent catabolic process (biological process)
GO:0005680 - anaphase-promoting complex (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0016462 - pyrophosphatase activity (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
GO:0097602 - cullin family protein binding (molecular function)
InterPro domainsIPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR024766 - Zinc finger, RING-H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3439695.1 hypothetical protein FNV43_RR17973 [Rhamnella rubrinervis]8.6e-3897.5Show/hide
Query:  TMDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
        T+DSDV MVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
Subjt:  TMDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG

KAG6586496.1 RING-box protein 1a, partial [Cucurbita argyrosperma subsp. sororia]9.7e-7477.37Show/hide
Query:  MFRLHEKPVRRRSYSYRKSVRPCQGDGLRSIFLATFLFVPTMDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLC
        MFRLHEKPV   SYSYRKSVRPCQGDGLRSIFLATFLFVPTMDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLC
Subjt:  MFRLHEKPVRRRSYSYRKSVRPCQGDGLRSIFLATFLFVPTMDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLC

Query:  IECQANQASATSEECTVAWG---------------------------------------KEFGMPILLTLLQPDAPVFADCPAPHTVNSC
        IECQANQASATSEECTVAWG                                       KEFGMPI LTLLQPDAPVFADCPAPHTVNSC
Subjt:  IECQANQASATSEECTVAWG---------------------------------------KEFGMPILLTLLQPDAPVFADCPAPHTVNSC

QCE09558.1 RING-box protein 1 [Vigna unguiculata]6.6e-3886.52Show/hide
Query:  TMDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGKEFGMPILL
        T+DSDVTMVP GE SSSAGPSS+KKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG  F + +++
Subjt:  TMDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGKEFGMPILL

XP_015889019.1 RING-box protein 1a [Ziziphus jujuba]8.6e-3897.5Show/hide
Query:  TMDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
        T+DSDV MVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
Subjt:  TMDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG

XP_022937741.1 RING-box protein 1a-like [Cucurbita moschata]3.0e-38100Show/hide
Query:  MDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
        MDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
Subjt:  MDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG

TrEMBL top hitse value%identityAlignment
A0A4D6N8D2 RING-box protein 13.2e-3886.52Show/hide
Query:  TMDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGKEFGMPILL
        T+DSDVTMVP GE SSSAGPSS+KKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG  F + +++
Subjt:  TMDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGKEFGMPILL

A0A6J1DPM4 RING-box protein 1a-like4.2e-3897.5Show/hide
Query:  TMDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
        T+DSDV MVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
Subjt:  TMDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG

A0A6J1FB79 RING-box protein 1a-like1.4e-38100Show/hide
Query:  MDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
        MDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
Subjt:  MDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG

A0A6J1HSM1 RING-box protein 1a-like isoform X11.4e-38100Show/hide
Query:  MDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
        MDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
Subjt:  MDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG

A0A6P4A6G4 RING-box protein 1a4.2e-3897.5Show/hide
Query:  TMDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
        T+DSDV MVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
Subjt:  TMDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG

SwissProt top hitse value%identityAlignment
P62877 E3 ubiquitin-protein ligase RBX11.4e-2776.71Show/hide
Query:  MVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
        M    +  + +G +S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
Subjt:  MVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG

P62878 E3 ubiquitin-protein ligase RBX11.4e-2776.71Show/hide
Query:  MVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
        M    +  + +G +S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
Subjt:  MVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG

Q940X7 RING-box protein 1a1.1e-3588.89Show/hide
Query:  TMDSDVTMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
        T+DSDVTM+P GEASSS A  SS KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
Subjt:  TMDSDVTMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG

Q9M2B0 RING-box protein 1b7.6e-2977.78Show/hide
Query:  TMDSDVTMVPVGEASSSAGP-SSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
        +++SDV M   GE+SS + P SS+K  KRFE+KKW+AVALWAWDIVVDNCAICRNHIMDLCIEC ANQASATSEECTVAWG
Subjt:  TMDSDVTMVPVGEASSSAGP-SSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG

Q9W5E1 RING-box protein 1A1.4e-2790.48Show/hide
Query:  PSSTKK--PKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
        PSS+ K   KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
Subjt:  PSSTKK--PKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG

Arabidopsis top hitse value%identityAlignment
AT3G42830.1 RING/U-box superfamily protein5.4e-3077.78Show/hide
Query:  TMDSDVTMVPVGEASSSAGP-SSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
        +++SDV M   GE+SS + P SS+K  KRFE+KKW+AVALWAWDIVVDNCAICRNHIMDLCIEC ANQASATSEECTVAWG
Subjt:  TMDSDVTMVPVGEASSSAGP-SSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG

AT5G20570.1 RING-box 17.7e-3788.89Show/hide
Query:  TMDSDVTMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
        T+DSDVTM+P GEASSS A  SS KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
Subjt:  TMDSDVTMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG

AT5G20570.2 RING-box 15.0e-3688.75Show/hide
Query:  TMDSDVTMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
        T+DSDVTM+P GEASSS A  SS KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
Subjt:  TMDSDVTMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW

AT5G20570.3 RING-box 11.2e-3271.72Show/hide
Query:  TMDSDVTMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWD------------------IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
        T+DSDVTM+P GEASSS A  SS KK KRFEIKKW+AVALWAW                   IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG
Subjt:  TMDSDVTMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWD------------------IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAGATTACACGAGAAGCCTGTCAGACGCCGCAGCTACAGCTACAGGAAATCGGTCCGCCCGTGTCAAGGAGACGGATTAAGAAGCATCTTTCTTGCAACTTTCCT
TTTTGTGCCAACCATGGACTCCGACGTGACGATGGTTCCGGTCGGCGAGGCTTCGAGCAGTGCCGGTCCTTCGTCTACCAAGAAACCCAAGCGTTTTGAGATCAAAAAGT
GGAACGCCGTCGCTCTATGGGCATGGGATATCGTTGTCGATAACTGTGCGATCTGCAGAAATCATATCATGGATCTTTGCATCGAGTGCCAAGCAAACCAGGCAAGCGCA
ACCAGCGAGGAATGTACTGTGGCTTGGGGCAAGGAGTTTGGGATGCCCATTCTTCTCACTTTGTTGCAGCCGGACGCTCCAGTTTTTGCTGATTGCCCCGCACCTCACAC
AGTTAACAGTTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTAGATTACACGAGAAGCCTGTCAGACGCCGCAGCTACAGCTACAGGAAATCGGTCCGCCCGTGTCAAGGAGACGGATTAAGAAGCATCTTTCTTGCAACTTTCCT
TTTTGTGCCAACCATGGACTCCGACGTGACGATGGTTCCGGTCGGCGAGGCTTCGAGCAGTGCCGGTCCTTCGTCTACCAAGAAACCCAAGCGTTTTGAGATCAAAAAGT
GGAACGCCGTCGCTCTATGGGCATGGGATATCGTTGTCGATAACTGTGCGATCTGCAGAAATCATATCATGGATCTTTGCATCGAGTGCCAAGCAAACCAGGCAAGCGCA
ACCAGCGAGGAATGTACTGTGGCTTGGGGCAAGGAGTTTGGGATGCCCATTCTTCTCACTTTGTTGCAGCCGGACGCTCCAGTTTTTGCTGATTGCCCCGCACCTCACAC
AGTTAACAGTTGCTAA
Protein sequenceShow/hide protein sequence
MFRLHEKPVRRRSYSYRKSVRPCQGDGLRSIFLATFLFVPTMDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASA
TSEECTVAWGKEFGMPILLTLLQPDAPVFADCPAPHTVNSC