; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh13G000150 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G000150
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description28S ribosomal protein S29, mitochondrial
Genome locationCmo_Chr13:160270..161511
RNA-Seq ExpressionCmoCh13G000150
SyntenyCmoCh13G000150
Gene Ontology termsGO:0043229 - intracellular organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583329.1 hypothetical protein SDJN03_19261, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3695.24Show/hide
Query:  MVALSLPPHLHSHSSLARMQAIISNSKGIGVGMVKGADCMRMPVELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPIRC
        MVALSLPPHLHSHSSLARMQAIISNSKGIGVGMVKGADCMRMPV   LVKDIPVLIAIDQND WFTFSEYEEPVTVRSTPPIRC
Subjt:  MVALSLPPHLHSHSSLARMQAIISNSKGIGVGMVKGADCMRMPVELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPIRC

XP_004145300.3 28S ribosomal protein S29, mitochondrial [Cucumis sativus]4.8e-1357.83Show/hide
Query:  KGIGVGMVKGADCMRMP---------------------------VELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPI
        +G GVGM KGAD MRMP                            ELSLVKDIPVLIAIDQ +NWFTFSEYEEPVTVRST PI
Subjt:  KGIGVGMVKGADCMRMP---------------------------VELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPI

XP_008457304.1 PREDICTED: 28S ribosomal protein S29, mitochondrial [Cucumis melo]1.6e-1357.83Show/hide
Query:  KGIGVGMVKGADCMRMP---------------------------VELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPI
        +G+GVGM KGAD MRMP                            ELSLVKDIPVLIAIDQ +NWFTFSEYEEPVTVRST PI
Subjt:  KGIGVGMVKGADCMRMP---------------------------VELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPI

XP_011657272.1 28S ribosomal protein S29, mitochondrial [Cucumis sativus]4.8e-1357.83Show/hide
Query:  KGIGVGMVKGADCMRMP---------------------------VELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPI
        +G GVGM KGAD MRMP                            ELSLVKDIPVLIAIDQ +NWFTFSEYEEPVTVRST PI
Subjt:  KGIGVGMVKGADCMRMP---------------------------VELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPI

XP_038895729.1 28S ribosomal protein S29, mitochondrial [Benincasa hispida]6.3e-1356.63Show/hide
Query:  KGIGVGMVKGADCMRMP---------------------------VELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPI
        +G+GVGM+KGAD M MP                            ELSLVKDIPVLIAIDQ +NWFTFSEYEEPVTVRST PI
Subjt:  KGIGVGMVKGADCMRMP---------------------------VELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPI

TrEMBL top hitse value%identityAlignment
A0A0A0KG66 Uncharacterized protein2.3e-1357.83Show/hide
Query:  KGIGVGMVKGADCMRMP---------------------------VELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPI
        +G GVGM KGAD MRMP                            ELSLVKDIPVLIAIDQ +NWFTFSEYEEPVTVRST PI
Subjt:  KGIGVGMVKGADCMRMP---------------------------VELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPI

A0A0A0LVC2 Uncharacterized protein2.3e-1357.83Show/hide
Query:  KGIGVGMVKGADCMRMP---------------------------VELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPI
        +G GVGM KGAD MRMP                            ELSLVKDIPVLIAIDQ +NWFTFSEYEEPVTVRST PI
Subjt:  KGIGVGMVKGADCMRMP---------------------------VELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPI

A0A1S3C6G8 28S ribosomal protein S29, mitochondrial8.0e-1457.83Show/hide
Query:  KGIGVGMVKGADCMRMP---------------------------VELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPI
        +G+GVGM KGAD MRMP                            ELSLVKDIPVLIAIDQ +NWFTFSEYEEPVTVRST PI
Subjt:  KGIGVGMVKGADCMRMP---------------------------VELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPI

A0A2I0VVM1 Uncharacterized protein1.2e-1252.87Show/hide
Query:  ISNSKGIGVGMVKGADCMRMP---------------------------VELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPI
        IS  +G GVGM+KG D M MP                            ELSLVKD+PVL+AIDQ +NWFTFSEYEEPVTVRST PI
Subjt:  ISNSKGIGVGMVKGADCMRMP---------------------------VELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPI

A0A5A7UZA8 28S ribosomal protein S298.0e-1457.83Show/hide
Query:  KGIGVGMVKGADCMRMP---------------------------VELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPI
        +G+GVGM KGAD MRMP                            ELSLVKDIPVLIAIDQ +NWFTFSEYEEPVTVRST PI
Subjt:  KGIGVGMVKGADCMRMP---------------------------VELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16870.1 mitochondrial 28S ribosomal protein S29-related5.7e-1245.78Show/hide
Query:  KGIGVGMVKGADCMRMP---------------------------VELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPI
        +G GVG +KGAD M +P                            ELS+VKD+PVLI IDQ ++WFTFSE+EEPVT RS  PI
Subjt:  KGIGVGMVKGADCMRMP---------------------------VELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGCGCTTTCTGATGATGATCCCTCATTCGATGTTGGCACATATGGTCGCCCTCTCTTTACCTCCGCATCTTCACTCTCACAGCTCACTCGCAAGGATGCAGGCAAT
TATTTCTAATTCAAAGGGCATTGGCGTTGGGATGGTGAAAGGGGCTGATTGCATGAGGATGCCTGTGGAACTATCGCTTGTGAAAGATATTCCTGTGCTCATTGCTATTG
ATCAAAATGACAACTGGTTTACGTTCAGTGAGTATGAAGAACCAGTGACTGTTCGTTCTACTCCGCCAATACGTTGCTAG
mRNA sequenceShow/hide mRNA sequence
TTAGCAGTGGGCGCGCTCTTCAGAGTCCGGCGAAACCCGAAACCTCGCGTTCATCTTCATTCTCATTTCCGAGCGCCGGAAAACTTTGAGGTCAATTTTTTAGAGCATCA
GCGCTGCCTCTAAGCACCACCTCTGCAATCGAAATCCTTCTCCTACCCTATCTCTTGTTTCAAATTACTCAGCTAAGACCACCAAATCCACCGTTAAGAAGGGCAAGTCC
AAGGCCGACGCTAAAGCCGCCGATGATCCCTCCGCCTCCGCTGCTGCTTCAGACGAATTAGATGCGGCGCTTTCTGATGATGATCCCTCATTCGATGTTGGCACATATGG
TCGCCCTCTCTTTACCTCCGCATCTTCACTCTCACAGCTCACTCGCAAGGATGCAGGCAATTATTTCTAATTCAAAGGGCATTGGCGTTGGGATGGTGAAAGGGGCTGAT
TGCATGAGGATGCCTGTGGAACTATCGCTTGTGAAAGATATTCCTGTGCTCATTGCTATTGATCAAAATGACAACTGGTTTACGTTCAGTGAGTATGAAGAACCAGTGAC
TGTTCGTTCTACTCCGCCAATACGTTGCTAG
Protein sequenceShow/hide protein sequence
MRRFLMMIPHSMLAHMVALSLPPHLHSHSSLARMQAIISNSKGIGVGMVKGADCMRMPVELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPIRC