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CmoCh13G000340 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G000340
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionmitochondrial import inner membrane translocase subunit TIM22-4-like
Genome locationCmo_Chr13:222644..224026
RNA-Seq ExpressionCmoCh13G000340
SyntenyCmoCh13G000340
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0045039 - protein insertion into mitochondrial inner membrane (biological process)
GO:0071806 - protein transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0042721 - TIM22 mitochondrial import inner membrane insertion complex (cellular component)
GO:0003824 - catalytic activity (molecular function)
GO:0008320 - protein transmembrane transporter activity (molecular function)
GO:0030943 - mitochondrion targeting sequence binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037014.1 Mitochondrial import inner membrane translocase subunit TIM22-1 [Cucurbita argyrosperma subsp. argyrosperma]3.4e-1176Show/hide
Query:  SSHNEQEDRLSEKPPTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGL
        SSH+       EKPP EPIR+PTVEEIRGQDIWNNCAVRSVVSGV+G GL
Subjt:  SSHNEQEDRLSEKPPTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGL
ONH99798.1 hypothetical protein PRUPE_6G051100 [Prunus persica]9.8e-1172.22Show/hide
Query:  MADSSHNEQE-DRLSEKPPTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGL
        MA ++ NE    R  EKPP EPIR+P+VEEIRGQDIWNNCAVRSVVSGV+G GL
Subjt:  MADSSHNEQE-DRLSEKPPTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGL
XP_016650332.1 PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-4-like isoform X2 [Prunus mume]9.8e-1172.22Show/hide
Query:  MADSSHNEQE-DRLSEKPPTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGL
        MA ++ NE    R  EKPP EPIR+P+VEEIRGQDIWNNCAVRSVVSGV+G GL
Subjt:  MADSSHNEQE-DRLSEKPPTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGL
XP_022154905.1 mitochondrial import inner membrane translocase subunit TIM22-4-like [Momordica charantia]1.2e-1176Show/hide
Query:  SSHNEQEDRLSEKPPTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGL
        SSH+      +EKPP EPIR+PTVEEIRGQDIWNNCAVRSVVSGV+G GL
Subjt:  SSHNEQEDRLSEKPPTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGL
XP_022948292.1 mitochondrial import inner membrane translocase subunit TIM22-4 [Cucurbita moschata]3.4e-1176Show/hide
Query:  SSHNEQEDRLSEKPPTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGL
        SSH+       EKPP EPIR+PTVEEIRGQDIWNNCAVRSVVSGV+G GL
Subjt:  SSHNEQEDRLSEKPPTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGL
TrEMBL top hitse value%identityAlignment
A0A6J1DKY7 mitochondrial import inner membrane translocase subunit TIM22-4-like5.6e-1276Show/hide
Query:  SSHNEQEDRLSEKPPTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGL
        SSH+      +EKPP EPIR+PTVEEIRGQDIWNNCAVRSVVSGV+G GL
Subjt:  SSHNEQEDRLSEKPPTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGL
A0A6J1G8S5 mitochondrial import inner membrane translocase subunit TIM22-41.6e-1176Show/hide
Query:  SSHNEQEDRLSEKPPTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGL
        SSH+       EKPP EPIR+PTVEEIRGQDIWNNCAVRSVVSGV+G GL
Subjt:  SSHNEQEDRLSEKPPTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGL
A0A6J1K8G7 mitochondrial import inner membrane translocase subunit TIM22-41.6e-1176Show/hide
Query:  SSHNEQEDRLSEKPPTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGL
        SSH+       EKPP EPIR+PTVEEIRGQDIWNNCAVRSVVSGV+G GL
Subjt:  SSHNEQEDRLSEKPPTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGL
A0A6J5V3A5 Uncharacterized protein4.7e-1172.22Show/hide
Query:  MADSSHNEQE-DRLSEKPPTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGL
        MA ++ NE    R  EKPP EPIR+P+VEEIRGQDIWNNCAVRSVVSGV+G GL
Subjt:  MADSSHNEQE-DRLSEKPPTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGL
M5W1I2 Uncharacterized protein4.7e-1172.22Show/hide
Query:  MADSSHNEQE-DRLSEKPPTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGL
        MA ++ NE    R  EKPP EPIR+P+VEEIRGQDIWNNCAVRSVVSGV+G GL
Subjt:  MADSSHNEQE-DRLSEKPPTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGL
SwissProt top hitse value%identityAlignment
A1XJK0 Mitochondrial import inner membrane translocase subunit TIM22-42.0e-0659.46Show/hide
Query:  IPTVEEIRGQDIWNNCAVRSVVSGVIGVGLDYSWVIF
        +PT+EEIR Q++WNNCAVR+V SGV+G GL     +F
Subjt:  IPTVEEIRGQDIWNNCAVRSVVSGVIGVGLDYSWVIF
A2RVP7 Mitochondrial import inner membrane translocase subunit TIM22-17.3e-0948.53Show/hide
Query:  MADSSHNEQEDRLSEKP--------PTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGLDYSWVIF
        MADSS  E     S  P          +PIR+PT+EEIR Q++WNNCAVR+V SGV+G GL     +F
Subjt:  MADSSHNEQEDRLSEKP--------PTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGLDYSWVIF
Arabidopsis top hitse value%identityAlignment
AT1G18320.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein1.4e-0759.46Show/hide
Query:  IPTVEEIRGQDIWNNCAVRSVVSGVIGVGLDYSWVIF
        +PT+EEIR Q++WNNCAVR+V SGV+G GL     +F
Subjt:  IPTVEEIRGQDIWNNCAVRSVVSGVIGVGLDYSWVIF
AT3G10110.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein5.2e-1048.53Show/hide
Query:  MADSSHNEQEDRLSEKP--------PTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGLDYSWVIF
        MADSS  E     S  P          +PIR+PT+EEIR Q++WNNCAVR+V SGV+G GL     +F
Subjt:  MADSSHNEQEDRLSEKP--------PTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGLDYSWVIF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGACTCAAGTCATAACGAACAAGAAGATCGTCTCTCGGAGAAGCCTCCAACTGAGCCTATAAGGATCCCCACAGTCGAAGAGATTCGCGGCCAAGATATTTGGAA
CAACTGTGCAGTTCGCAGTGTTGTTAGTGGAGTCATCGGTGTGGGCTTGGATTATTCCTGGGTTATTTTTGGGTGTATTGGACAATCCATTGATGCAAGACGAGATGTCT
GCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGACTCAAGTCATAACGAACAAGAAGATCGTCTCTCGGAGAAGCCTCCAACTGAGCCTATAAGGATCCCCACAGTCGAAGAGATTCGCGGCCAAGATATTTGGAA
CAACTGTGCAGTTCGCAGTGTTGTTAGTGGAGTCATCGGTGTGGGCTTGGATTATTCCTGGGTTATTTTTGGGTGTATTGGACAATCCATTGATGCAAGACGAGATGTCT
GCTAA
Protein sequenceShow/hide protein sequence
MADSSHNEQEDRLSEKPPTEPIRIPTVEEIRGQDIWNNCAVRSVVSGVIGVGLDYSWVIFGCIGQSIDARRDVC