; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh13G000970 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G000970
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionEncodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).
Genome locationCmo_Chr13:559571..563784
RNA-Seq ExpressionCmoCh13G000970
SyntenyCmoCh13G000970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583402.1 hypothetical protein SDJN03_19334, partial [Cucurbita argyrosperma subsp. sororia]9.4e-6899.25Show/hide
Query:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
        MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
Subjt:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS

Query:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGS
        PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQG+
Subjt:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGS

KAG7019166.1 hypothetical protein SDJN02_18124 [Cucurbita argyrosperma subsp. argyrosperma]3.7e-6486.27Show/hide
Query:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
        MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
Subjt:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS

Query:  PSPAPT--------------------LKKSGGEDDPNGNNFQPASRGNWWQGS
        PSPAPT                    LKKSGGEDDPNGNNFQPASRGNWWQG+
Subjt:  PSPAPT--------------------LKKSGGEDDPNGNNFQPASRGNWWQGS

XP_022964980.1 uncharacterized protein LOC111464929 [Cucurbita moschata]2.6e-70100Show/hide
Query:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
        MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
Subjt:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS

Query:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY
        PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY
Subjt:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY

XP_022970583.1 uncharacterized protein LOC111469517 [Cucurbita maxima]1.7e-6999.26Show/hide
Query:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
        MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAG S
Subjt:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS

Query:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY
        PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY
Subjt:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY

XP_038894691.1 uncharacterized protein LOC120083160 [Benincasa hispida]1.4e-5888.24Show/hide
Query:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
        MEGKSKGYQASSFVADLFDVKEPP +S+S VFAAIF SPQKG GRNSSSSGDWLKQ NGNQP H RQGNS GSLEPCHLSSSLYYGGQDGYSQAPSAG S
Subjt:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS

Query:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY
        P   PT+KKSGGEDDPNGNN QPASRGNWWQGSLYY
Subjt:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY

TrEMBL top hitse value%identityAlignment
A0A0A0LXG9 Uncharacterized protein3.4e-5583.45Show/hide
Query:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
        MEGKSKGYQASSFVADLFDVKE P +S+S  FA IFPSPQKG GRNSSSS DWLKQ NG+QP H RQGNSGGSLEPCHLSSSLYYGGQDGYSQA SAG S
Subjt:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS

Query:  PSPAP--TLKKSGG-EDDPNGNNFQPASRGNWWQGSLYY
        P P P  T+KKSGG +DDPNGNN QPASRGNWWQGSLYY
Subjt:  PSPAP--TLKKSGG-EDDPNGNNFQPASRGNWWQGSLYY

A0A1S3C5M6 uncharacterized protein LOC1034971233.0e-5684.17Show/hide
Query:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
        MEGKSKGYQ SSFVADLFDVKE P +S+S  FA IFPSPQKG GRNSSSS DWLKQ NGNQP H RQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAG S
Subjt:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS

Query:  PSPAP--TLKKSGG-EDDPNGNNFQPASRGNWWQGSLYY
        P P P  T+KKSGG +DDPNGNN QPASRGNWWQGSLYY
Subjt:  PSPAP--TLKKSGG-EDDPNGNNFQPASRGNWWQGSLYY

A0A5D3BEB7 Uncharacterized protein3.0e-5684.17Show/hide
Query:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
        MEGKSKGYQ SSFVADLFDVKE P +S+S  FA IFPSPQKG GRNSSSS DWLKQ NGNQP H RQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAG S
Subjt:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS

Query:  PSPAP--TLKKSGG-EDDPNGNNFQPASRGNWWQGSLYY
        P P P  T+KKSGG +DDPNGNN QPASRGNWWQGSLYY
Subjt:  PSPAP--TLKKSGG-EDDPNGNNFQPASRGNWWQGSLYY

A0A6J1HJ44 uncharacterized protein LOC1114649291.3e-70100Show/hide
Query:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
        MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
Subjt:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS

Query:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY
        PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY
Subjt:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY

A0A6J1I4B7 uncharacterized protein LOC1114695178.3e-7099.26Show/hide
Query:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
        MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAG S
Subjt:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS

Query:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY
        PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY
Subjt:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G39855.2 unknown protein2.0e-0734.96Show/hide
Query:  STSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLE-----------PCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTLKKSGGE
        S+S++ +F +IFP P      N +S     K    N  +   +G    + E           PC+LSSS+YYGGQD YS       S +     KK G E
Subjt:  STSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLE-----------PCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTLKKSGGE

Query:  DDPNGNNFQPASRGNWWQGSLYY
         D      + ASRGNWW+GS  Y
Subjt:  DDPNGNNFQPASRGNWWQGSLYY

AT3G55646.1 unknown protein4.3e-1038.16Show/hide
Query:  EGKSKGYQASSFVADL--FD------VKEPPSTSSSEVFAAIFPSP---QKGGGRNSSSSGDWLKQANGN---QPSHARQGNSGGSLE---PCHLSSSLY
        + K K   ASS  + L  FD      V    S+S++ +F +IFP P   Q G   + +S G  +K  + N   + S+ ++  S  + E   PCHLSSSLY
Subjt:  EGKSKGYQASSFVADL--FD------VKEPPSTSSSEVFAAIFPSP---QKGGGRNSSSSGDWLKQANGN---QPSHARQGNSGGSLE---PCHLSSSLY

Query:  YGGQDGYSQAPSAGLSPSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY
        YGGQ+ YS       + +   T KK G E D      + ASRGNWW+GSLYY
Subjt:  YGGQDGYSQAPSAGLSPSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY

AT5G02020.1 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).3.0e-1642.41Show/hide
Query:  MEGKSK------GYQASSFVADLFDVKEPPST-SSSEVFAAIFPSPQKGGGRNS-----SSSGDW---LKQANGNQPSHARQGNSGGS-------LEPCH
        MEG+ K         +SS  ++LF  +E PS+ SSS +  +IFP P K  GR S      + G W     +  GN   +  Q  + GS       ++PCH
Subjt:  MEGKSK------GYQASSFVADLFDVKEPPST-SSSEVFAAIFPSPQKGGGRNS-----SSSGDW---LKQANGNQPSHARQGNSGGS-------LEPCH

Query:  LSSSLYYGGQDGYSQAPSAGLSPSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY
        LSSS+YYGG D Y Q P    S S   T KK GGEDD        ASRGNWWQGSLYY
Subjt:  LSSSLYYGGQDGYSQAPSAGLSPSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY

AT5G05965.1 unknown protein1.0e-0835.29Show/hide
Query:  KSKGYQASSFVADLFDVKEPPSTSS-SEVFAAIFPSP--QKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
        K+     SS   +LF  K   S SS S +  +IFP P  +K G   +      + QA   + SH ++       E  + SSS+YYGGQ  YS   + G S
Subjt:  KSKGYQASSFVADLFDVKEPPSTSS-SEVFAAIFPSP--QKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS

Query:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY
         SP+   K++    D   +     SRGNWW+GSLYY
Subjt:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY

AT5G59080.1 unknown protein2.0e-2347.52Show/hide
Query:  MEGK----SKGYQASSFVADLFDVKEP-PSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAP
        MEGK    S    +SSF A+LF  K+P P +SSS +F+ +FP P KG  R+ S+S     QA   +  +A++      +EPCHLSSSLYYGGQD Y+++ 
Subjt:  MEGK----SKGYQASSFVADLFDVKEP-PSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAP

Query:  SAGLSPSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY
        +    P P    ++  GEDD NG N Q  SRGNWWQGSLYY
Subjt:  SAGLSPSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAAAGTCTAAAGGGTATCAAGCCTCCTCTTTCGTTGCTGATCTTTTCGATGTCAAGGAGCCGCCATCAACTTCTTCATCAGAAGTCTTTGCAGCAATCTTTCC
TTCTCCACAGAAGGGGGGAGGCAGGAATTCTTCTAGCTCTGGGGATTGGCTAAAACAGGCCAATGGAAATCAACCATCCCACGCCAGACAAGGAAATTCAGGAGGGAGCT
TGGAGCCTTGTCATCTGAGTTCATCTCTATACTATGGAGGACAAGATGGTTACTCCCAGGCCCCATCAGCTGGACTATCCCCATCCCCTGCCCCCACTTTGAAGAAAAGT
GGGGGAGAAGATGATCCAAATGGAAACAACTTCCAACCTGCTTCTAGGGGAAATTGGTGGCAAGGTTCTCTTTATTATTAG
mRNA sequenceShow/hide mRNA sequence
AGAAAGTGAATGAGGAAATTTCCAAAAGAAAAATTCCCAAATAAGATCTTTGTTAAACTAATTGGAAAGAGGCGGCTTCTCTTTCTTTTCTTTTCCCCAAGGATGATGGC
ACATGGGTGACAAAGCAGTAGCCATCGCCTTCTTCTTATAAATAGGTGTGGTGGAAAAGGAGAGTAATTTTGTTTGGTAAGAAGGAAAGATTGAGAGAAAATGGAGGGAA
AGTCTAAAGGGTATCAAGCCTCCTCTTTCGTTGCTGATCTTTTCGATGTCAAGGAGCCGCCATCAACTTCTTCATCAGAAGTCTTTGCAGCAATCTTTCCTTCTCCACAG
AAGGGGGGAGGCAGGAATTCTTCTAGCTCTGGGGATTGGCTAAAACAGGCCAATGGAAATCAACCATCCCACGCCAGACAAGGAAATTCAGGAGGGAGCTTGGAGCCTTG
TCATCTGAGTTCATCTCTATACTATGGAGGACAAGATGGTTACTCCCAGGCCCCATCAGCTGGACTATCCCCATCCCCTGCCCCCACTTTGAAGAAAAGTGGGGGAGAAG
ATGATCCAAATGGAAACAACTTCCAACCTGCTTCTAGGGGAAATTGGTGGCAAGGTTCTCTTTATTATTAGGACGACTGCCTTGCCTTGGTGGCGCATGAATTCCCTCCT
ATTTTCCAAGGAATTCATAACGAAGCTGCGCAGTGGAGCTTTGAGTTGGATTTACGTTACATTGTGTATACCATTTCAAATTAATTTCTTGTTTGTTTTTTCTTTTACTT
TGAAAAATGGTGTGAAGTTTTCTGTATTTTCTTTCCTTTAATTCCTGTTTTATTAAAAATGTGCCTTCATTTTCAGTTCAATAATTATAAGACGATAGAATTAAAGACTT
TTAGTGTTATTCATCGGACGTTCTTTTAGAATGATAATTAGTTATACACAAACGCCCTCTACCAACGGTTTCGAATTTATGTG
Protein sequenceShow/hide protein sequence
MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTLKKS
GGEDDPNGNNFQPASRGNWWQGSLYY