; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh13G001050 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G001050
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionserine/arginine repetitive matrix protein 1-like isoform X3
Genome locationCmo_Chr13:585629..587189
RNA-Seq ExpressionCmoCh13G001050
SyntenyCmoCh13G001050
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019174.1 Serine/arginine repetitive matrix protein 1 [Cucurbita argyrosperma subsp. argyrosperma]2.4e-10695.06Show/hide
Query:  MSPSSSPIQKFDRPSPHPLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKGRKRHRRS
        M PSSSPIQKFDRPSPHPLERRSPSSPARLK SSLSQHRSISPYD++YSSKERGNRSPVKVKSPRV TSDERSYSRRGKAKETEARTVENNKGRKRHRRS
Subjt:  MSPSSSPIQKFDRPSPHPLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKGRKRHRRS

Query:  DRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAV
        DRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRR++EEEERRCWKEKKRQRREEH RKK KRRAEKTKAKTLSDD SDDGRAV
Subjt:  DRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAV

Query:  REVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE
        REVCR SDGAYEAEQRRLEVELRNKALEAFIARKGR HNKSSE
Subjt:  REVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE

XP_022964685.1 serine/arginine repetitive matrix protein 1-like isoform X1 [Cucurbita moschata]2.8e-115100Show/hide
Query:  MSPSSSPIQKFDRPSPHPLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKGRKRHRRS
        MSPSSSPIQKFDRPSPHPLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKGRKRHRRS
Subjt:  MSPSSSPIQKFDRPSPHPLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKGRKRHRRS

Query:  DRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAV
        DRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAV
Subjt:  DRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAV

Query:  REVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE
        REVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE
Subjt:  REVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE

XP_022964686.1 serine/arginine repetitive matrix protein 1-like isoform X2 [Cucurbita moschata]2.6e-10594.24Show/hide
Query:  MSPSSSPIQKFDRPSPHPLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKGRKRHRRS
        MSPSSSPIQKFDRPSPHPLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKGRKRHRRS
Subjt:  MSPSSSPIQKFDRPSPHPLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKGRKRHRRS

Query:  DRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAV
        DRSDTSSERRHRRL              DRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAV
Subjt:  DRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAV

Query:  REVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE
        REVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE
Subjt:  REVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE

XP_022964688.1 serine/arginine repetitive matrix protein 1-like isoform X3 [Cucurbita moschata]2.8e-115100Show/hide
Query:  MSPSSSPIQKFDRPSPHPLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKGRKRHRRS
        MSPSSSPIQKFDRPSPHPLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKGRKRHRRS
Subjt:  MSPSSSPIQKFDRPSPHPLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKGRKRHRRS

Query:  DRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAV
        DRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAV
Subjt:  DRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAV

Query:  REVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE
        REVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE
Subjt:  REVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE

XP_022970511.1 serine/arginine repetitive matrix protein 1-like isoform X2 [Cucurbita maxima]7.0e-9085.2Show/hide
Query:  MSPSSSPIQKFDRPSPH-------PLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKG
        M PSSSPIQK DRPSPH       PLERRSPSSPARLKRSSLSQHRSISPY  +YSSKERGNRSPVKVKSPRVRTSDE+SYSRRGKAKE EAR VENNKG
Subjt:  MSPSSSPIQKFDRPSPH-------PLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKG

Query:  RKRHRRSDRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDC
        RKRHRRSDRSDTSSERRHRR DRRDT SE            SEDSYDSELERKEARRRK  EEERR  KEKKRQRREEHGRKK KRRAEKT AKTLSDDC
Subjt:  RKRHRRSDRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDC

Query:  SDDGRAVREVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE
        SDDGRAVRE CRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNK SE
Subjt:  SDDGRAVREVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE

TrEMBL top hitse value%identityAlignment
A0A6J1HJM7 serine/arginine repetitive matrix protein 1-like isoform X21.3e-10594.24Show/hide
Query:  MSPSSSPIQKFDRPSPHPLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKGRKRHRRS
        MSPSSSPIQKFDRPSPHPLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKGRKRHRRS
Subjt:  MSPSSSPIQKFDRPSPHPLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKGRKRHRRS

Query:  DRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAV
        DRSDTSSERRHRRL              DRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAV
Subjt:  DRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAV

Query:  REVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE
        REVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE
Subjt:  REVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE

A0A6J1HLI6 serine/arginine repetitive matrix protein 1-like isoform X11.4e-115100Show/hide
Query:  MSPSSSPIQKFDRPSPHPLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKGRKRHRRS
        MSPSSSPIQKFDRPSPHPLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKGRKRHRRS
Subjt:  MSPSSSPIQKFDRPSPHPLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKGRKRHRRS

Query:  DRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAV
        DRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAV
Subjt:  DRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAV

Query:  REVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE
        REVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE
Subjt:  REVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE

A0A6J1HLM2 serine/arginine repetitive matrix protein 1-like isoform X31.4e-115100Show/hide
Query:  MSPSSSPIQKFDRPSPHPLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKGRKRHRRS
        MSPSSSPIQKFDRPSPHPLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKGRKRHRRS
Subjt:  MSPSSSPIQKFDRPSPHPLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKGRKRHRRS

Query:  DRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAV
        DRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAV
Subjt:  DRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAV

Query:  REVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE
        REVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE
Subjt:  REVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE

A0A6J1HZB4 serine/arginine repetitive matrix protein 1-like isoform X31.7e-8678.6Show/hide
Query:  MSPSSSPIQKFDRPSPH-------PLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENN--
        M PSSSPIQK DRPSPH       PLERRSPSSPARLKRSSLSQHRSISPY  +YSSKERGNRSPVKVKSPRVRTSDE+SYSRRGKAKE EAR VENN  
Subjt:  MSPSSSPIQKFDRPSPH-------PLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENN--

Query:  -------------------KGRKRHRRSDRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEH
                           KGRKRHRRSDRSDTSSERRHRR DRRDT SE            SEDSYDSELERKEARRRK  EEERR  KEKKRQRREEH
Subjt:  -------------------KGRKRHRRSDRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEH

Query:  GRKKGKRRAEKTKAKTLSDDCSDDGRAVREVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE
        GRKK KRRAEKT AKTLSDDCSDDGRAVRE CRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNK SE
Subjt:  GRKKGKRRAEKTKAKTLSDDCSDDGRAVREVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE

A0A6J1I0S7 serine/arginine repetitive matrix protein 1-like isoform X23.4e-9085.2Show/hide
Query:  MSPSSSPIQKFDRPSPH-------PLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKG
        M PSSSPIQK DRPSPH       PLERRSPSSPARLKRSSLSQHRSISPY  +YSSKERGNRSPVKVKSPRVRTSDE+SYSRRGKAKE EAR VENNKG
Subjt:  MSPSSSPIQKFDRPSPH-------PLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKG

Query:  RKRHRRSDRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDC
        RKRHRRSDRSDTSSERRHRR DRRDT SE            SEDSYDSELERKEARRRK  EEERR  KEKKRQRREEHGRKK KRRAEKT AKTLSDDC
Subjt:  RKRHRRSDRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDC

Query:  SDDGRAVREVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE
        SDDGRAVRE CRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNK SE
Subjt:  SDDGRAVREVCRPSDGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACCTTCATCCTCACCAATACAGAAATTTGATAGGCCATCACCACATCCTCTAGAACGTAGATCTCCATCATCTCCAGCACGTCTCAAGAGATCAAGCCTTTCTCA
ACATAGATCCATTTCACCATATGATCAGAATTATTCATCAAAGGAGCGGGGAAACCGATCGCCTGTCAAAGTAAAATCTCCCAGGGTCAGAACCAGTGATGAAAGAAGCT
ACTCACGCCGAGGTAAAGCCAAGGAAACTGAGGCTCGGACTGTCGAAAATAATAAGGGTAGGAAAAGACACAGAAGATCAGACAGGAGTGACACTTCTTCGGAGAGAAGA
CACAGAAGATTAGACAGGCGTGACACTTATTCGGAGAGAAGACACAGAAGATCAGACAGGCGCGTCACTTCTTCGGAAGACAGCTATGATAGTGAATTGGAGAGGAAGGA
GGCCAGGAGAAGGAAGGAGGAGGAGGAGGAGAGGAGGTGTTGGAAGGAGAAGAAGCGACAAAGACGTGAAGAGCATGGACGTAAAAAGGGAAAGCGGCGTGCTGAGAAGA
CGAAAGCTAAGACTCTCAGTGATGATTGCTCGGACGATGGTCGAGCTGTAAGGGAAGTGTGTCGTCCGAGTGATGGTGCGTATGAGGCCGAGCAGAGAAGGTTAGAGGTC
GAGTTGAGGAATAAGGCACTGGAAGCATTCATTGCAAGGAAAGGGAGAAGGCATAATAAATCTTCAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCACCTTCATCCTCACCAATACAGAAATTTGATAGGCCATCACCACATCCTCTAGAACGTAGATCTCCATCATCTCCAGCACGTCTCAAGAGATCAAGCCTTTCTCA
ACATAGATCCATTTCACCATATGATCAGAATTATTCATCAAAGGAGCGGGGAAACCGATCGCCTGTCAAAGTAAAATCTCCCAGGGTCAGAACCAGTGATGAAAGAAGCT
ACTCACGCCGAGGTAAAGCCAAGGAAACTGAGGCTCGGACTGTCGAAAATAATAAGGGTAGGAAAAGACACAGAAGATCAGACAGGAGTGACACTTCTTCGGAGAGAAGA
CACAGAAGATTAGACAGGCGTGACACTTATTCGGAGAGAAGACACAGAAGATCAGACAGGCGCGTCACTTCTTCGGAAGACAGCTATGATAGTGAATTGGAGAGGAAGGA
GGCCAGGAGAAGGAAGGAGGAGGAGGAGGAGAGGAGGTGTTGGAAGGAGAAGAAGCGACAAAGACGTGAAGAGCATGGACGTAAAAAGGGAAAGCGGCGTGCTGAGAAGA
CGAAAGCTAAGACTCTCAGTGATGATTGCTCGGACGATGGTCGAGCTGTAAGGGAAGTGTGTCGTCCGAGTGATGGTGCGTATGAGGCCGAGCAGAGAAGGTTAGAGGTC
GAGTTGAGGAATAAGGCACTGGAAGCATTCATTGCAAGGAAAGGGAGAAGGCATAATAAATCTTCAGAATAGTCTTTTCCTTCCACATAAGAGCTCTTGATAAATGGTGA
TTTCTTTGATGTTCATTTGAATGCAAACTCAACACAGATCTTTCTCCTTGCCTTTCTTGAGCTTGTTTTGGAGTTCTTTTAGAATGGCAGCCTTACCTTAGCTACTTAGA
GAAAATCGTATCGAATCTTTAGCTCAATGTTGCATAGACGTTTAAAAAGT
Protein sequenceShow/hide protein sequence
MSPSSSPIQKFDRPSPHPLERRSPSSPARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEARTVENNKGRKRHRRSDRSDTSSERR
HRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKEARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAVREVCRPSDGAYEAEQRRLEV
ELRNKALEAFIARKGRRHNKSSE