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CmoCh13G001180 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G001180
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr13:679314..680325
RNA-Seq ExpressionCmoCh13G001180
SyntenyCmoCh13G001180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067747.1 hypothetical protein E6C27_scaffold352G00670 [Cucumis melo var. makuwa]6.8e-6988.82Show/hide
Query:  VTLLD-YGSMGKGRVRGMKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDSPYCIYKNPG
        V LLD  GSMGKGRVRGMKLGPT TIVFKSTPRQFTE EIH+E  N+EDY+NVDARLSILELKMANM+SILEQNGFMQSNN T A+TNGD PYCIYKNPG
Subjt:  VTLLD-YGSMGKGRVRGMKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDSPYCIYKNPG

Query:  RVCGMRLQPTSTQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTKVVSILRRNGLMQGNI
        RVC MRLQP STQVFRSISHRNIRNEARMDQNVDTRLSILE QMTKVVSILRRNGLMQGNI
Subjt:  RVCGMRLQPTSTQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTKVVSILRRNGLMQGNI

KAG6583423.1 hypothetical protein SDJN03_19355, partial [Cucurbita argyrosperma subsp. sororia]1.2e-6299.19Show/hide
Query:  MGKGRVRGMKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDSPYCIYKNPGRVCGMRLQP
        MGKGRVRGMKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDSPYCIYKNPGRVCGM+LQP
Subjt:  MGKGRVRGMKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDSPYCIYKNPGRVCGMRLQP

Query:  TSTQVFRSISHRNIRNEARMDQN
        TSTQVFRSISHRNIRNEARMDQN
Subjt:  TSTQVFRSISHRNIRNEARMDQN

KAG7019185.1 hypothetical protein SDJN02_18143, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-6596.24Show/hide
Query:  MKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDSPYCIYKNPGRVCGMRLQPTSTQVFRS
        MKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDSPYCIYKNPGRVCGM+LQPTSTQVFRS
Subjt:  MKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDSPYCIYKNPGRVCGMRLQPTSTQVFRS

Query:  ISHRNIRNEARMDQNVDTRLSILEAQMTKVVSI
        ISHRNIRNEARMDQNVDTRLSILEAQMTK + +
Subjt:  ISHRNIRNEARMDQNVDTRLSILEAQMTKVVSI

KGN65730.1 hypothetical protein Csa_019939 [Cucumis sativus]6.1e-7091.45Show/hide
Query:  MGKGRVRGMKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDSPYCIYKNPGRVCGMRLQP
        MGKGRVRGMKLGPT TIVFKSTPRQFTE EIH+EA N+EDY+NVDARLSILELKMANM+SILEQNGFMQSNN TA HTNGD PYCIYKNPGRVC MRLQP
Subjt:  MGKGRVRGMKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDSPYCIYKNPGRVCGMRLQP

Query:  TSTQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTKVVSILRRNGLMQGNI
         STQVFRSISHRNIRNEARMDQNVDTRLSILE QMTKVVSILRRNGLMQGNI
Subjt:  TSTQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTKVVSILRRNGLMQGNI

TYJ97397.1 hypothetical protein E5676_scaffold194G002160 [Cucumis melo var. makuwa]2.9e-6790.13Show/hide
Query:  MGKGRVRGMKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDSPYCIYKNPGRVCGMRLQP
        MGKGRVRGMKLGPT TIVFKSTPRQFTE EIH+E  N+EDY+NVDARLSILELKMANM+SILEQNGFMQSNN T A+TNGD PYCIYKNPGRVC MRLQP
Subjt:  MGKGRVRGMKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDSPYCIYKNPGRVCGMRLQP

Query:  TSTQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTKVVSILRRNGLMQGNI
         STQVFRSISHRNIRNEARMDQNVDTRLSILE QMTKVVSILRRNGLMQGNI
Subjt:  TSTQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTKVVSILRRNGLMQGNI

TrEMBL top hitse value%identityAlignment
A0A0A0LUW6 Uncharacterized protein3.0e-7091.45Show/hide
Query:  MGKGRVRGMKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDSPYCIYKNPGRVCGMRLQP
        MGKGRVRGMKLGPT TIVFKSTPRQFTE EIH+EA N+EDY+NVDARLSILELKMANM+SILEQNGFMQSNN TA HTNGD PYCIYKNPGRVC MRLQP
Subjt:  MGKGRVRGMKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDSPYCIYKNPGRVCGMRLQP

Query:  TSTQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTKVVSILRRNGLMQGNI
         STQVFRSISHRNIRNEARMDQNVDTRLSILE QMTKVVSILRRNGLMQGNI
Subjt:  TSTQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTKVVSILRRNGLMQGNI

A0A5A7VKN2 Uncharacterized protein3.3e-6988.82Show/hide
Query:  VTLLD-YGSMGKGRVRGMKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDSPYCIYKNPG
        V LLD  GSMGKGRVRGMKLGPT TIVFKSTPRQFTE EIH+E  N+EDY+NVDARLSILELKMANM+SILEQNGFMQSNN T A+TNGD PYCIYKNPG
Subjt:  VTLLD-YGSMGKGRVRGMKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDSPYCIYKNPG

Query:  RVCGMRLQPTSTQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTKVVSILRRNGLMQGNI
        RVC MRLQP STQVFRSISHRNIRNEARMDQNVDTRLSILE QMTKVVSILRRNGLMQGNI
Subjt:  RVCGMRLQPTSTQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTKVVSILRRNGLMQGNI

A0A5D3BE38 Uncharacterized protein1.4e-6790.13Show/hide
Query:  MGKGRVRGMKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDSPYCIYKNPGRVCGMRLQP
        MGKGRVRGMKLGPT TIVFKSTPRQFTE EIH+E  N+EDY+NVDARLSILELKMANM+SILEQNGFMQSNN T A+TNGD PYCIYKNPGRVC MRLQP
Subjt:  MGKGRVRGMKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDSPYCIYKNPGRVCGMRLQP

Query:  TSTQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTKVVSILRRNGLMQGNI
         STQVFRSISHRNIRNEARMDQNVDTRLSILE QMTKVVSILRRNGLMQGNI
Subjt:  TSTQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTKVVSILRRNGLMQGNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGTTACTGCTAACAAAGTGGCATTGTTGATTTCATTAGCCTATGCAAAGTTTCCTCTTCTCCACTTAAAGTTCGTCACTCTACTGGACTACGGTTCTATGGGGAA
AGGACGTGTTCGTGGCATGAAGTTAGGACCCACCCCCACCATAGTGTTCAAGTCTACACCACGTCAATTTACCGAGATTGAGATTCATAATGAGGCCAACAATATGGAAG
ATTACGAAAACGTAGATGCTAGACTTTCGATATTAGAGTTGAAAATGGCCAATATGCTCTCGATTTTGGAACAAAATGGTTTCATGCAATCCAATAATCTGACTGCTGCA
CATACGAATGGTGATTCGCCATACTGTATATACAAGAATCCTGGACGTGTTTGTGGCATGAGATTACAACCTACATCGACTCAAGTGTTCAGATCTATCTCACACCGTAA
TATTCGTAACGAGGCTCGTATGGATCAAAATGTAGATACTAGACTTTCAATATTAGAGGCTCAAATGACCAAGGTAGTTTCGATTTTACGACGAAATGGTCTGATGCAAG
GCAACATATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGTTACTGCTAACAAAGTGGCATTGTTGATTTCATTAGCCTATGCAAAGTTTCCTCTTCTCCACTTAAAGTTCGTCACTCTACTGGACTACGGTTCTATGGGGAA
AGGACGTGTTCGTGGCATGAAGTTAGGACCCACCCCCACCATAGTGTTCAAGTCTACACCACGTCAATTTACCGAGATTGAGATTCATAATGAGGCCAACAATATGGAAG
ATTACGAAAACGTAGATGCTAGACTTTCGATATTAGAGTTGAAAATGGCCAATATGCTCTCGATTTTGGAACAAAATGGTTTCATGCAATCCAATAATCTGACTGCTGCA
CATACGAATGGTGATTCGCCATACTGTATATACAAGAATCCTGGACGTGTTTGTGGCATGAGATTACAACCTACATCGACTCAAGTGTTCAGATCTATCTCACACCGTAA
TATTCGTAACGAGGCTCGTATGGATCAAAATGTAGATACTAGACTTTCAATATTAGAGGCTCAAATGACCAAGGTAGTTTCGATTTTACGACGAAATGGTCTGATGCAAG
GCAACATATGAAGAGGACCACCACAGAAGTTTCAAGACATCACTAGGAACTGGGAGTTAACACACTAATGGTGCATCAAGTTTGTGAAGTCAACTCAAGATGTTTCTTAA
TGTTTTAACTGAGCCTGTAATGGTAAAACAACTTGATCTCCCAACTCTTAGGCTTAAATATTGTTATATTGGGATGATATGAAGTATGTATTACAGCATTCTTCCATTTT
CAACCTCTTTTGTTGAAATTTCTGGAGGTGGTAGTATTAGTGTATTAACATAAAA
Protein sequenceShow/hide protein sequence
MCVTANKVALLISLAYAKFPLLHLKFVTLLDYGSMGKGRVRGMKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLSILEQNGFMQSNNLTAA
HTNGDSPYCIYKNPGRVCGMRLQPTSTQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTKVVSILRRNGLMQGNI