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CmoCh13G001500 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G001500
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr13:928438..928839
RNA-Seq ExpressionCmoCh13G001500
SyntenyCmoCh13G001500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583454.1 hypothetical protein SDJN03_19386, partial [Cucurbita argyrosperma subsp. sororia]1.0e-6698.5Show/hide
Query:  MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRRRPAEIRGGGRRSRCF
        MAS CISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRRRPAEIRGGGRRS CF
Subjt:  MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRRRPAEIRGGGRRSRCF

Query:  AIVRAAAAKASSGALLSMFRRLLSCVAKVDGRK
        AIVRAAAAKASSGALLSMFRRLLSCVAKVDGRK
Subjt:  AIVRAAAAKASSGALLSMFRRLLSCVAKVDGRK

XP_008457578.1 PREDICTED: uncharacterized protein LOC103497245 [Cucumis melo]1.1e-4472.93Show/hide
Query:  MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRR-RPAEIRGGGRRSRC
        MASVCISEC+++ACI+ A +PTY +LQRW EEE  S E RRPR RAA+GISRRQMYLRSYTF REDTVV E+T Q C GK++ RR RPA IRG  RRSRC
Subjt:  MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRR-RPAEIRGGGRRSRC

Query:  FAIVRAAAAKASSGALLSMFRRLLSCVAKVDGR
        FA+V+AAA +ASSGAL+ MFRRLL CVAKVDGR
Subjt:  FAIVRAAAAKASSGALLSMFRRLLSCVAKVDGR

XP_022964754.1 uncharacterized protein LOC111464745 [Cucurbita moschata]1.8e-68100Show/hide
Query:  MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRRRPAEIRGGGRRSRCF
        MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRRRPAEIRGGGRRSRCF
Subjt:  MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRRRPAEIRGGGRRSRCF

Query:  AIVRAAAAKASSGALLSMFRRLLSCVAKVDGRK
        AIVRAAAAKASSGALLSMFRRLLSCVAKVDGRK
Subjt:  AIVRAAAAKASSGALLSMFRRLLSCVAKVDGRK

XP_022970388.1 uncharacterized protein LOC111469389 [Cucurbita maxima]4.7e-6496.24Show/hide
Query:  MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRRRPAEIRGGGRRSRCF
        MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPR+RAADGISRRQMYLRSYTF REDT VHESTAQTCLGKLK RRRPAEIRGGGRRSRCF
Subjt:  MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRRRPAEIRGGGRRSRCF

Query:  AIVRAAAAKASSGALLSMFRRLLSCVAKVDGRK
        AIVRAAAAKASSGALLSMFRRLL CVAKVDGRK
Subjt:  AIVRAAAAKASSGALLSMFRRLLSCVAKVDGRK

XP_023519361.1 uncharacterized protein LOC111782795 [Cucurbita pepo subsp. pepo]3.6e-6496.24Show/hide
Query:  MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRRRPAEIRGGGRRSRCF
        MASVCISECIND CIIPAGRPTYFSLQRWPEEEDGSVEPRRPR+RAADGISRRQMYLRSYTF REDT VHESTAQTCLGKLK RRRPAEIRGGGRRSRCF
Subjt:  MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRRRPAEIRGGGRRSRCF

Query:  AIVRAAAAKASSGALLSMFRRLLSCVAKVDGRK
        AIVRAAAAKASSGALLSMFRRLLSCVAKVDGRK
Subjt:  AIVRAAAAKASSGALLSMFRRLLSCVAKVDGRK

TrEMBL top hitse value%identityAlignment
A0A0A0LXY3 Uncharacterized protein5.3e-4572.39Show/hide
Query:  MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRRR-PAEIRGGGRRSRC
        MASVCISEC+++ACI+ A RPTY +LQRW EEE  S E RRPR RAADGISRRQMYLRSYTF RED VV E+T Q C GK++ RRR PA IRGG RRSRC
Subjt:  MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRRR-PAEIRGGGRRSRC

Query:  FAIVRAAAAKASSGALLSMFRRLLSCVAKVDGRK
         A+V+AAA++ SSGALL +FRRLL CVAKVDGR+
Subjt:  FAIVRAAAAKASSGALLSMFRRLLSCVAKVDGRK

A0A1S3C748 uncharacterized protein LOC1034972455.3e-4572.93Show/hide
Query:  MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRR-RPAEIRGGGRRSRC
        MASVCISEC+++ACI+ A +PTY +LQRW EEE  S E RRPR RAA+GISRRQMYLRSYTF REDTVV E+T Q C GK++ RR RPA IRG  RRSRC
Subjt:  MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRR-RPAEIRGGGRRSRC

Query:  FAIVRAAAAKASSGALLSMFRRLLSCVAKVDGR
        FA+V+AAA +ASSGAL+ MFRRLL CVAKVDGR
Subjt:  FAIVRAAAAKASSGALLSMFRRLLSCVAKVDGR

A0A5A7SXG3 Uncharacterized protein5.3e-4572.93Show/hide
Query:  MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRR-RPAEIRGGGRRSRC
        MASVCISEC+++ACI+ A +PTY +LQRW EEE  S E RRPR RAA+GISRRQMYLRSYTF REDTVV E+T Q C GK++ RR RPA IRG  RRSRC
Subjt:  MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRR-RPAEIRGGGRRSRC

Query:  FAIVRAAAAKASSGALLSMFRRLLSCVAKVDGR
        FA+V+AAA +ASSGAL+ MFRRLL CVAKVDGR
Subjt:  FAIVRAAAAKASSGALLSMFRRLLSCVAKVDGR

A0A6J1HP59 uncharacterized protein LOC1114647458.9e-69100Show/hide
Query:  MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRRRPAEIRGGGRRSRCF
        MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRRRPAEIRGGGRRSRCF
Subjt:  MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRRRPAEIRGGGRRSRCF

Query:  AIVRAAAAKASSGALLSMFRRLLSCVAKVDGRK
        AIVRAAAAKASSGALLSMFRRLLSCVAKVDGRK
Subjt:  AIVRAAAAKASSGALLSMFRRLLSCVAKVDGRK

A0A6J1I3Q2 uncharacterized protein LOC1114693892.3e-6496.24Show/hide
Query:  MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRRRPAEIRGGGRRSRCF
        MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPR+RAADGISRRQMYLRSYTF REDT VHESTAQTCLGKLK RRRPAEIRGGGRRSRCF
Subjt:  MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRRRPAEIRGGGRRSRCF

Query:  AIVRAAAAKASSGALLSMFRRLLSCVAKVDGRK
        AIVRAAAAKASSGALLSMFRRLL CVAKVDGRK
Subjt:  AIVRAAAAKASSGALLSMFRRLLSCVAKVDGRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G46300.1 unknown protein1.3e-0631.88Show/hide
Query:  MASVCISECIN----DACIIPAGRPTYFSLQRWPEEEDGSV-----EPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRRRPAEI-
        MAS CI +C+N      C+ P    TY +L +WP  E   V     +  + R    D IS RQMYLRSYTF  E+   +E       G+   RR      
Subjt:  MASVCISECIN----DACIIPAGRPTYFSLQRWPEEEDGSV-----EPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRRRPAEI-

Query:  -RGGGRRSRCFAIVRAAAAKASSGALLSMFRRLLSCVA
          GGGR+      +R     +    +  + R+ LSC +
Subjt:  -RGGGRRSRCFAIVRAAAAKASSGALLSMFRRLLSCVA

AT3G46310.1 unknown protein2.1e-0642.31Show/hide
Query:  MASVCISECI---NDACIIPAGRPTYFSLQRWPEEE---------DGSVEPRRPRVRAADGISRRQMYLRSYTFCRED
        MAS CI +C+   N+A  +  GR T+  + +WP  E         DGS  PR  R  A + +S RQMYLRSYTF R++
Subjt:  MASVCISECI---NDACIIPAGRPTYFSLQRWPEEE---------DGSVEPRRPRVRAADGISRRQMYLRSYTFCRED

AT5G02640.1 unknown protein1.9e-1539.1Show/hide
Query:  MASVCISECINDA----CIIPAGRPTYFSLQRWPEEEDGSVEPRR-----PRVRAADGISRRQMYLRSYTFCRED-----TVVHESTAQTCLGKLKW---
        M SVCIS CINDA      +   R +Y +L +WPE +   V   R     P  R  D IS RQMYLRSYTF RED       V   T  +CLG++K    
Subjt:  MASVCISECINDA----CIIPAGRPTYFSLQRWPEEEDGSVEPRR-----PRVRAADGISRRQMYLRSYTFCRED-----TVVHESTAQTCLGKLKW---

Query:  -RRRPAEIRG--------GGRRSRCFAIVRAAAAKASSGALLSMFRRLLSCVAKVD
         RR+  E  G          RR     + R    + +   +L +FRRLLSC A VD
Subjt:  -RRRPAEIRG--------GGRRSRCFAIVRAAAAKASSGALLSMFRRLLSCVAKVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCGTCTGCATATCCGAATGCATCAACGACGCCTGTATTATCCCCGCCGGCCGGCCGACGTATTTCAGCTTGCAGCGGTGGCCGGAGGAGGAGGATGGG
TCTGTAGAGCCCCGTCGGCCACGGGTGAGAGCGGCGGACGGGATCTCTCGCCGGCAAATGTACTTGAGAAGCTACACCTTCTGCAGGGAGGACACCGTCGTCCAT
GAGAGTACAGCACAGACCTGCCTTGGGAAGCTCAAGTGGCGACGGAGGCCGGCAGAGATCCGCGGCGGCGGAAGGAGGAGCCGCTGTTTCGCCATCGTGAGGGCC
GCCGCTGCGAAGGCTTCTTCCGGCGCCTTGCTCTCCATGTTCCGGCGGTTGCTTTCTTGCGTGGCGAAAGTTGACGGTCGTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCCGTCTGCATATCCGAATGCATCAACGACGCCTGTATTATCCCCGCCGGCCGGCCGACGTATTTCAGCTTGCAGCGGTGGCCGGAGGAGGAGGATGGG
TCTGTAGAGCCCCGTCGGCCACGGGTGAGAGCGGCGGACGGGATCTCTCGCCGGCAAATGTACTTGAGAAGCTACACCTTCTGCAGGGAGGACACCGTCGTCCAT
GAGAGTACAGCACAGACCTGCCTTGGGAAGCTCAAGTGGCGACGGAGGCCGGCAGAGATCCGCGGCGGCGGAAGGAGGAGCCGCTGTTTCGCCATCGTGAGGGCC
GCCGCTGCGAAGGCTTCTTCCGGCGCCTTGCTCTCCATGTTCCGGCGGTTGCTTTCTTGCGTGGCGAAAGTTGACGGTCGTAAGTGA
Protein sequenceShow/hide protein sequence
MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSYTFCREDTVVHESTAQTCLGKLKWRRRPAEIRGGGRRSRCFAIVRA
AAAKASSGALLSMFRRLLSCVAKVDGRK