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CmoCh13G001680 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G001680
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr13:1096900..1097133
RNA-Seq ExpressionCmoCh13G001680
SyntenyCmoCh13G001680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653222.1 hypothetical protein Csa_019661, partial [Cucumis sativus]1.6e-0857.69Show/hide
Query:  APSTGLKANISSLPPRRGRIKARIFESLVNSAAL-------ILLKVIRYLVSSAQIRAVPLPSPVAPPPPPLRYDGGS
        A ST  K  IS+LPP+RGRIKA+IFESLVNSAAL       IL ++IR LV+ A+   VP P+P A PPPPL + G S
Subjt:  APSTGLKANISSLPPRRGRIKARIFESLVNSAAL-------ILLKVIRYLVSSAQIRAVPLPSPVAPPPPPLRYDGGS
KAG6583308.1 hypothetical protein SDJN03_19240, partial [Cucurbita argyrosperma subsp. sororia]9.1e-2892.21Show/hide
Query:  MAAAPSTGLKANISSLPPRRGRIKARIFESLVNSAALILLKVIRYLVSSAQIRAVPLPSPVAPPPPPLRYDGGSIVT
        MAAAPSTGLKANISSLPPRRGRIKARIFESLVNSAALIL KVIRYLVS AQIRAV  PSP+APPPPPLRYDGGS+VT
Subjt:  MAAAPSTGLKANISSLPPRRGRIKARIFESLVNSAALILLKVIRYLVSSAQIRAVPLPSPVAPPPPPLRYDGGSIVT
KAG6583309.1 hypothetical protein SDJN03_19241, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2689.61Show/hide
Query:  MAAAPSTGLKANISSLPPRRGRIKARIFESLVNSAALILLKVIRYLVSSAQIRAVPLPSPVAPPPPPLRYDGGSIVT
        MAAA STGLKANISSLPPRRGRIKARIFESLVNSAALIL KVIRYLVS A++ AVPLPSPVAP PPPLRYDGGS+VT
Subjt:  MAAAPSTGLKANISSLPPRRGRIKARIFESLVNSAALILLKVIRYLVSSAQIRAVPLPSPVAPPPPPLRYDGGSIVT
KAG6583472.1 hypothetical protein SDJN03_19404, partial [Cucurbita argyrosperma subsp. sororia]2.6e-3097.4Show/hide
Query:  MAAAPSTGLKANISSLPPRRGRIKARIFESLVNSAALILLKVIRYLVSSAQIRAVPLPSPVAPPPPPLRYDGGSIVT
        MAAAPS GLKANISSLPPRRGRIKARIFESLVNSAALILLKVIRYLVSSAQIRAVPLPSPVAPPPPPLRYDGGS+VT
Subjt:  MAAAPSTGLKANISSLPPRRGRIKARIFESLVNSAALILLKVIRYLVSSAQIRAVPLPSPVAPPPPPLRYDGGSIVT
TrEMBL top hitse value%identityAlignment
A0A0A0LS06 Uncharacterized protein3.9e-0856.79Show/hide
Query:  MAAAPSTGLKANISSLPPRRGRIKARIFESLVNSAAL-------ILLKVIRYLVSSAQIRAVPLPSPVAPPPPPLRYDGGS
        MAAA ST  K  I +LPP+RGRIKA+I ESLVNSAAL       IL + IR LV+SA  R V  P P   PPPPL + G S
Subjt:  MAAAPSTGLKANISSLPPRRGRIKARIFESLVNSAAL-------ILLKVIRYLVSSAQIRAVPLPSPVAPPPPPLRYDGGS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAGCTCCTTCCACAGGCTTAAAGGCGAACATCTCTAGCCTTCCCCCGAGACGGGGTCGAATCAAGGCTCGTATTTTTGAGAGCCTTGTCAATTCAGCAGCTTT
GATACTCTTAAAAGTCATTCGATACCTCGTCAGCAGTGCTCAAATCCGCGCTGTTCCGCTGCCTTCTCCGGTGGCACCGCCGCCTCCTCCTCTTCGTTACGATGGAGGCT
CCATCGTCACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCAGCTCCTTCCACAGGCTTAAAGGCGAACATCTCTAGCCTTCCCCCGAGACGGGGTCGAATCAAGGCTCGTATTTTTGAGAGCCTTGTCAATTCAGCAGCTTT
GATACTCTTAAAAGTCATTCGATACCTCGTCAGCAGTGCTCAAATCCGCGCTGTTCCGCTGCCTTCTCCGGTGGCACCGCCGCCTCCTCCTCTTCGTTACGATGGAGGCT
CCATCGTCACATGA
Protein sequenceShow/hide protein sequence
MAAAPSTGLKANISSLPPRRGRIKARIFESLVNSAALILLKVIRYLVSSAQIRAVPLPSPVAPPPPPLRYDGGSIVT