; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh13G001690 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G001690
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr13:1108615..1108848
RNA-Seq ExpressionCmoCh13G001690
SyntenyCmoCh13G001690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653222.1 hypothetical protein Csa_019661, partial [Cucumis sativus]6.6e-1057.69Show/hide
Query:  ARSTGLKANISSLPPRRGQIKARIFESLVNSAAL-------ILFKVIRYLVSGARVHAVPLPSPVAPLPPPLCYDGGS
        A ST  K  IS+LPP+RG+IKA+IFESLVNSAAL       IL ++IR LV+GAR   VP P+P  P PPPL + G S
Subjt:  ARSTGLKANISSLPPRRGQIKARIFESLVNSAAL-------ILFKVIRYLVSGARVHAVPLPSPVAPLPPPLCYDGGS
KAG6583308.1 hypothetical protein SDJN03_19240, partial [Cucurbita argyrosperma subsp. sororia]3.3e-2587.01Show/hide
Query:  MAAARSTGLKANISSLPPRRGQIKARIFESLVNSAALILFKVIRYLVSGARVHAVPLPSPVAPLPPPLCYDGGSVVT
        MAAA STGLKANISSLPPRRG+IKARIFESLVNSAALILFKVIRYLVSGA++ AV  PSP+AP PPPL YDGGSVVT
Subjt:  MAAARSTGLKANISSLPPRRGQIKARIFESLVNSAALILFKVIRYLVSGARVHAVPLPSPVAPLPPPLCYDGGSVVT
KAG6583309.1 hypothetical protein SDJN03_19241, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3097.4Show/hide
Query:  MAAARSTGLKANISSLPPRRGQIKARIFESLVNSAALILFKVIRYLVSGARVHAVPLPSPVAPLPPPLCYDGGSVVT
        MAAARSTGLKANISSLPPRRG+IKARIFESLVNSAALILFKVIRYLVSGARVHAVPLPSPVAPLPPPL YDGGSVVT
Subjt:  MAAARSTGLKANISSLPPRRGQIKARIFESLVNSAALILFKVIRYLVSGARVHAVPLPSPVAPLPPPLCYDGGSVVT
KAG6583472.1 hypothetical protein SDJN03_19404, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2587.01Show/hide
Query:  MAAARSTGLKANISSLPPRRGQIKARIFESLVNSAALILFKVIRYLVSGARVHAVPLPSPVAPLPPPLCYDGGSVVT
        MAAA S GLKANISSLPPRRG+IKARIFESLVNSAALIL KVIRYLVS A++ AVPLPSPVAP PPPL YDGGSVVT
Subjt:  MAAARSTGLKANISSLPPRRGQIKARIFESLVNSAALILFKVIRYLVSGARVHAVPLPSPVAPLPPPLCYDGGSVVT
TrEMBL top hitse value%identityAlignment
A0A0A0LS06 Uncharacterized protein3.3e-0755.56Show/hide
Query:  MAAARSTGLKANISSLPPRRGQIKARIFESLVNSAAL-------ILFKVIRYLVSGARVHAVPLPSPVAPLPPPLCYDGGS
        MAAA ST  K  I +LPP+RG+IKA+I ESLVNSAAL       IL + IR LV+ AR    P P P AP PPPL + G S
Subjt:  MAAARSTGLKANISSLPPRRGQIKARIFESLVNSAAL-------ILFKVIRYLVSGARVHAVPLPSPVAPLPPPLCYDGGS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAGCTCGTTCCACGGGCTTAAAGGCGAACATCTCTAGCCTTCCTCCGAGACGGGGTCAAATCAAAGCTCGTATTTTTGAGAGCCTTGTCAATTCAGCAGCCTT
GATACTCTTCAAAGTCATTCGATACCTCGTTAGTGGTGCTCGAGTCCACGCCGTTCCGCTGCCTTCTCCAGTGGCACCGCTGCCTCCTCCTCTTTGTTACGATGGAGGCT
CCGTAGTCACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCAGCTCGTTCCACGGGCTTAAAGGCGAACATCTCTAGCCTTCCTCCGAGACGGGGTCAAATCAAAGCTCGTATTTTTGAGAGCCTTGTCAATTCAGCAGCCTT
GATACTCTTCAAAGTCATTCGATACCTCGTTAGTGGTGCTCGAGTCCACGCCGTTCCGCTGCCTTCTCCAGTGGCACCGCTGCCTCCTCCTCTTTGTTACGATGGAGGCT
CCGTAGTCACGTGA
Protein sequenceShow/hide protein sequence
MAAARSTGLKANISSLPPRRGQIKARIFESLVNSAALILFKVIRYLVSGARVHAVPLPSPVAPLPPPLCYDGGSVVT