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CmoCh13G002200 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G002200
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNodulin-like / Major Facilitator Superfamily protein
Genome locationCmo_Chr13:1733680..1734335
RNA-Seq ExpressionCmoCh13G002200
SyntenyCmoCh13G002200
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR010658 - Nodulin-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583525.1 Protein NUCLEAR FUSION DEFECTIVE 4, partial [Cucurbita argyrosperma subsp. sororia]5.1e-4474.13Show/hide
Query:  IGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---NLESL------EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR
        +G  +P +F   S L   K  +  T LN    A  LGS   N+E +      EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR
Subjt:  IGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---NLESL------EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR

Query:  DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQSK
        DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQSK
Subjt:  DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQSK

KAG6583527.1 Protein NUCLEAR FUSION DEFECTIVE 4, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4373.43Show/hide
Query:  IGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---NLESL------EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR
        +G  +P +F   S L   K  +  T LN    A  LGS   N+E +      EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR
Subjt:  IGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---NLESL------EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR

Query:  DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQSK
        DFYKGDVYKKYRDDMEVKHSN ELYSSDDKNNEHKMKTDDQSK
Subjt:  DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQSK

KAG6583535.1 Protein NUCLEAR FUSION DEFECTIVE 4, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4373.43Show/hide
Query:  IGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---NLESL------EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR
        +G  +P +F   S L   K  +  T LN    A  LGS   N+E +      EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR
Subjt:  IGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---NLESL------EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR

Query:  DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQSK
        DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHK+KTDDQSK
Subjt:  DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQSK

KAG6583539.1 Protein NUCLEAR FUSION DEFECTIVE 4, partial [Cucurbita argyrosperma subsp. sororia]2.5e-4373.43Show/hide
Query:  IGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---NLESL------EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR
        +G  +P +F   S L   K  +  T LN    A  LGS   N+E +      EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR
Subjt:  IGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---NLESL------EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR

Query:  DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQSK
        DFYKGDVYKKYRDDMEVKHSN ELYSSDDKNNEHKMKTDDQSK
Subjt:  DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQSK

XP_022964769.1 uncharacterized protein LOC111464769 [Cucurbita moschata]7.4e-4372.54Show/hide
Query:  IGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---NLESL------EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR
        +G  +P +F   S L   K  +  T LN    A  LGS   N+E +      EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVL+YRTR
Subjt:  IGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---NLESL------EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR

Query:  DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQS
        DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQ+
Subjt:  DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQS

XP_022964769.1 uncharacterized protein LOC111464769 [Cucurbita moschata]1.8e-33100Show/hide
Query:  MGDNHETESWLFVKQVVEGRWFSVFTSFPIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNL
        MGDNHETESWLFVKQVVEGRWFSVFTSFPIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNL
Subjt:  MGDNHETESWLFVKQVVEGRWFSVFTSFPIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNL

TrEMBL top hitse value%identityAlignment
A0A6J1HLW0 uncharacterized protein LOC1114647681.2e-3867.83Show/hide
Query:  IGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---NLESL------EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR
        +G  +P +F   S L   K  +  T LN    A  LGS   N+E +      EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR
Subjt:  IGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---NLESL------EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR

Query:  DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQSK
        DFYKGDVYKKYRDD+ V  SNVELYS+DD+NNEHK  TDD+SK
Subjt:  DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQSK

A0A6J1HLW0 uncharacterized protein LOC1114647681.7e-2992.96Show/hide
Query:  MGDNHETESWLFVKQVVEGRWFSVFTSFPIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNL
        MG+N   ESWLFVKQVVEGRWFSVFTSF IMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNL
Subjt:  MGDNHETESWLFVKQVVEGRWFSVFTSFPIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNL

A0A6J1HP67 uncharacterized protein LOC1114647693.6e-4372.54Show/hide
Query:  IGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---NLESL------EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR
        +G  +P +F   S L   K  +  T LN    A  LGS   N+E +      EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVL+YRTR
Subjt:  IGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---NLESL------EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR

Query:  DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQS
        DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQ+
Subjt:  DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQS

A0A6J1HP67 uncharacterized protein LOC1114647698.9e-34100Show/hide
Query:  MGDNHETESWLFVKQVVEGRWFSVFTSFPIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNL
        MGDNHETESWLFVKQVVEGRWFSVFTSFPIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNL
Subjt:  MGDNHETESWLFVKQVVEGRWFSVFTSFPIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNL

A0A6J1HP67 uncharacterized protein LOC1114647697.0e-3967.83Show/hide
Query:  IGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---NLESL------EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR
        +G  +P +F   S L   K  +  T LN    A  LGS   N+E +      EATKIGNVKNGKGLTCTGTHCF ESFMILA +TLFGAMASFVLAYRTR
Subjt:  IGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---NLESL------EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR

Query:  DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQSK
        DFYKGDVYKKYRDD+EV  SNVELYSSDDKNNEHK KTDD  K
Subjt:  DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQSK

A0A6J1HYK0 uncharacterized protein LOC1114692457.5e-3398.59Show/hide
Query:  MGDNHETESWLFVKQVVEGRWFSVFTSFPIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNL
        MGDN ETESWLFVKQVVEGRWFSVFTSFPIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNL
Subjt:  MGDNHETESWLFVKQVVEGRWFSVFTSFPIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNL

A0A6J1HYK0 uncharacterized protein LOC1114692457.0e-3967.83Show/hide
Query:  IGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---NLESL------EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR
        +G  +P +F   S L   K  +  T LN    A  LGS   N+E +      EATKIGNVKNGKGLTCTGTHCF ESFMILA +TLFGAMASFVLAYRTR
Subjt:  IGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---NLESL------EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR

Query:  DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQSK
        DFYKGDVYKKYRDD+EV  SNVELYSSDDKNNEHK KTDD  K
Subjt:  DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQSK

A0A6J1I3Q9 uncharacterized protein LOC1114693977.5e-3398.59Show/hide
Query:  MGDNHETESWLFVKQVVEGRWFSVFTSFPIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNL
        MGDN ETESWLFVKQVVEGRWFSVFTSFPIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNL
Subjt:  MGDNHETESWLFVKQVVEGRWFSVFTSFPIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNL

A0A6J1I3Q9 uncharacterized protein LOC1114693979.2e-3968.53Show/hide
Query:  IGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---NLESL------EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR
        +G  +P +F   S L   K  +  T LN    A  LGS   N+E +      EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR
Subjt:  IGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---NLESL------EATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTR

Query:  DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQSK
        DFYKGDVYKKY+DDME   SNVEL S DDKNNEHK K DDQSK
Subjt:  DFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G74780.1 Nodulin-like / Major Facilitator Superfamily protein1.8e-0737.04Show/hide
Query:  TQLNTLGFAKDLGSNLESLEATKIGNV----KNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTRDFYKGDVYKK
        T  NT+  A  +GS + S+    IG +     +G+G TC G+HCF  SF+I+A+V  FG + + VL +RT+  Y+  + K+
Subjt:  TQLNTLGFAKDLGSNLESLEATKIGNV----KNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTRDFYKGDVYKK

AT2G28120.1 Major facilitator superfamily protein7.7e-1440Show/hide
Query:  GCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNLESLEATKI--------------GNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLA
        G   P LF   S+L   K  Y  T  N    A  LGS + ++  T +                 K+ K LTC G+ C+   F+ILAAVT FGA+ S  LA
Subjt:  GCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNLESLEATKI--------------GNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLA

Query:  YRTRDFYKGDVYKKYRDDME
         RTR+FYKGD+YKK+R+  E
Subjt:  YRTRDFYKGDVYKKYRDDME

AT2G34355.1 Major facilitator superfamily protein4.5e-0637.33Show/hide
Query:  TLGFAKDLGSNLESLEATK--IGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTRDFYKGDVYKK
        T+  A  +GS + S++        V +    +C G+ CF  SFMI+A+V LFG++ + VL +RT  FYK  V K+
Subjt:  TLGFAKDLGSNLESLEATK--IGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTRDFYKGDVYKK

AT2G39210.1 Major facilitator superfamily protein1.5e-1240.17Show/hide
Query:  GCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---------NLESLEATK----IGNVK-NGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLA
        G   P LF   S++   K  Y  T  N    A  +GS          L  +EA K    +G  +  G+ L C GT CF  SF+I+AAVTLFG + S VL 
Subjt:  GCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGS---------NLESLEATK----IGNVK-NGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLA

Query:  YRTRDFYKGDVYKKYRD
         RT+ FYK D+YKK+R+
Subjt:  YRTRDFYKGDVYKKYRD

AT2G39210.1 Major facilitator superfamily protein3.4e-0949.12Show/hide
Query:  QVVEGRWFSVFTSFPIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNL
        Q++ GRWF  F S  IM   G+ Y+FG YS  +K    Y+QT LN L F KDLG+N+
Subjt:  QVVEGRWFSVFTSFPIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNL

AT3G01930.2 Major facilitator superfamily protein4.1e-0740Show/hide
Query:  VKQVVEGRWFSVFTSFPIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNLESLEAT
        VK  +  RW     +  I    G  YLFG+ S ++K+  +YNQ QL+ LG AKDLG ++  L  T
Subjt:  VKQVVEGRWFSVFTSFPIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNLESLEAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGACAACCATGAAACAGAAAGTTGGCTATTTGTGAAACAAGTTGTTGAAGGACGATGGTTTTCAGTGTTCACCTCTTTTCCGATCATGATCGGCTGCGGTTCACC
TTACTTGTTCGGAACATACTCCAAACTCTTAAAAACAAAATTCGACTACAATCAAACCCAACTTAATACCTTGGGATTTGCTAAAGATCTCGGCTCCAACCTCGAATCAT
TGGAAGCCACTAAAATTGGAAATGTGAAGAATGGGAAGGGCCTAACTTGCACTGGAACTCATTGCTTTAGTGAATCGTTCATGATTTTGGCTGCAGTGACGTTGTTTGGA
GCGATGGCTTCATTTGTACTAGCTTATAGAACTCGAGACTTCTACAAAGGTGATGTATATAAGAAATACAGAGATGACATGGAGGTTAAGCATTCGAACGTGGAATTATA
TTCTTCCGATGATAAGAACAATGAACACAAAATGAAAACTGATGATCAAAGTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGACAACCATGAAACAGAAAGTTGGCTATTTGTGAAACAAGTTGTTGAAGGACGATGGTTTTCAGTGTTCACCTCTTTTCCGATCATGATCGGCTGCGGTTCACC
TTACTTGTTCGGAACATACTCCAAACTCTTAAAAACAAAATTCGACTACAATCAAACCCAACTTAATACCTTGGGATTTGCTAAAGATCTCGGCTCCAACCTCGAATCAT
TGGAAGCCACTAAAATTGGAAATGTGAAGAATGGGAAGGGCCTAACTTGCACTGGAACTCATTGCTTTAGTGAATCGTTCATGATTTTGGCTGCAGTGACGTTGTTTGGA
GCGATGGCTTCATTTGTACTAGCTTATAGAACTCGAGACTTCTACAAAGGTGATGTATATAAGAAATACAGAGATGACATGGAGGTTAAGCATTCGAACGTGGAATTATA
TTCTTCCGATGATAAGAACAATGAACACAAAATGAAAACTGATGATCAAAGTAAATAA
Protein sequenceShow/hide protein sequence
MGDNHETESWLFVKQVVEGRWFSVFTSFPIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNLESLEATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFG
AMASFVLAYRTRDFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQSK