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CmoCh13G002570 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G002570
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionHomeobox-leucine zipper family protein
Genome locationCmo_Chr13:2131711..2132158
RNA-Seq ExpressionCmoCh13G002570
SyntenyCmoCh13G002570
Gene Ontology termsGO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsIPR013978 - MEKHLA
IPR044830 - Class III homeodomain-leucine zipper family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152944.1 homeobox-leucine zipper protein REVOLUTA-like [Momordica charantia]7.4e-3471.68Show/hide
Query:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTV
        MFANQA LDMLE TLVALQDITLD+ILGDSAR+ FS DFS+LM                     GFAYIPAGICMSTMGRHASFEQ +AWKVL EDESTV
Subjt:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTV

Query:  HCLAFSFVNWSFL
        HCLA SFVNWSFL
Subjt:  HCLAFSFVNWSFL

XP_022969629.1 homeobox-leucine zipper protein REVOLUTA-like [Cucurbita maxima]7.4e-3471.68Show/hide
Query:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTV
        MFANQA LDMLE TLVALQDITLD+ILGDSA K FS DFS+LM                     GFAYIPAGIC+STMGRHASFEQ +AWKVL EDESTV
Subjt:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTV

Query:  HCLAFSFVNWSFL
        HCLAFSFVNWSFL
Subjt:  HCLAFSFVNWSFL

XP_023536970.1 homeobox-leucine zipper protein REVOLUTA-like [Cucurbita pepo subsp. pepo]1.3e-3371.68Show/hide
Query:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTV
        MFANQA LDMLE TLVALQDITLD+ILGDSA K FS DFS+LM                     GFAYIPAGIC+STMGRHASFEQ +AWKVL EDESTV
Subjt:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTV

Query:  HCLAFSFVNWSFL
        HCLAFSFVNWSFL
Subjt:  HCLAFSFVNWSFL

XP_038894235.1 homeobox-leucine zipper protein REVOLUTA-like isoform X1 [Benincasa hispida]9.6e-3472.57Show/hide
Query:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTV
        MFANQA LDMLE TLVALQDITLD+I GDSARK FS  FSSLM                     GFAYIPAGICMSTMGRHASFEQ +AWKVL EDESTV
Subjt:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTV

Query:  HCLAFSFVNWSFL
        HCLAFSFVNWSFL
Subjt:  HCLAFSFVNWSFL

XP_038894236.1 homeobox-leucine zipper protein REVOLUTA-like isoform X2 [Benincasa hispida]9.6e-3472.57Show/hide
Query:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTV
        MFANQA LDMLE TLVALQDITLD+I GDSARK FS  FSSLM                     GFAYIPAGICMSTMGRHASFEQ +AWKVL EDESTV
Subjt:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTV

Query:  HCLAFSFVNWSFL
        HCLAFSFVNWSFL
Subjt:  HCLAFSFVNWSFL

TrEMBL top hitse value%identityAlignment
A0A5D3C3C5 Homeobox-leucine zipper protein REVOLUTA-like2.0e-3270.8Show/hide
Query:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTV
        MFANQA LDMLE TLVALQDITLD+I  DSARK FS  FSSLM                     GFAYIPAGICMSTMGR ASFEQ VAWKVL EDESTV
Subjt:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTV

Query:  HCLAFSFVNWSFL
        HCLAFSF+NWSFL
Subjt:  HCLAFSFVNWSFL

A0A6J1DHK3 homeobox-leucine zipper protein REVOLUTA-like3.6e-3471.68Show/hide
Query:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTV
        MFANQA LDMLE TLVALQDITLD+ILGDSAR+ FS DFS+LM                     GFAYIPAGICMSTMGRHASFEQ +AWKVL EDESTV
Subjt:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTV

Query:  HCLAFSFVNWSFL
        HCLA SFVNWSFL
Subjt:  HCLAFSFVNWSFL

A0A6J1FH70 homeobox-leucine zipper protein REVOLUTA-like isoform X26.1e-3471.68Show/hide
Query:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTV
        MFANQA LDMLE TLVALQDITLD+ILGDSA K FS DFS+LM                     GFAYIPAGIC+STMGRHASFEQ +AWKVL EDESTV
Subjt:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTV

Query:  HCLAFSFVNWSFL
        HCLAFSFVNWSFL
Subjt:  HCLAFSFVNWSFL

A0A6J1FHZ3 homeobox-leucine zipper protein REVOLUTA-like isoform X16.1e-3471.68Show/hide
Query:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTV
        MFANQA LDMLE TLVALQDITLD+ILGDSA K FS DFS+LM                     GFAYIPAGIC+STMGRHASFEQ +AWKVL EDESTV
Subjt:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTV

Query:  HCLAFSFVNWSFL
        HCLAFSFVNWSFL
Subjt:  HCLAFSFVNWSFL

A0A6J1I368 homeobox-leucine zipper protein REVOLUTA-like3.6e-3471.68Show/hide
Query:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTV
        MFANQA LDMLE TLVALQDITLD+ILGDSA K FS DFS+LM                     GFAYIPAGIC+STMGRHASFEQ +AWKVL EDESTV
Subjt:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTV

Query:  HCLAFSFVNWSFL
        HCLAFSFVNWSFL
Subjt:  HCLAFSFVNWSFL

SwissProt top hitse value%identityAlignment
A2XBL9 Homeobox-leucine zipper protein HOX106.1e-2350.89Show/hide
Query:  FANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTVH
        FAN+A LDMLE +LVALQD+TLD+I  +  ++   ++   LM+ G V                   Y+P+G+CMS MGRH SF+Q VAWKVL ED S VH
Subjt:  FANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTVH

Query:  CLAFSFVNWSFL
        CLAF FVNWSF+
Subjt:  CLAFSFVNWSFL

A2XK30 Homeobox-leucine zipper protein HOX322.9e-2553.57Show/hide
Query:  FANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTVH
        FANQA LDMLE TL+ALQDI+L++IL D  RK   T+F  +MQ                    GFAY+P G+C+S+MGR  S+EQ VAWKVL++D+ T H
Subjt:  FANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTVH

Query:  CLAFSFVNWSFL
        CLAF FVNWSF+
Subjt:  CLAFSFVNWSFL

Q6AST1 Homeobox-leucine zipper protein HOX322.9e-2553.57Show/hide
Query:  FANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTVH
        FANQA LDMLE TL+ALQDI+L++IL D  RK   T+F  +MQ                    GFAY+P G+C+S+MGR  S+EQ VAWKVL++D+ T H
Subjt:  FANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTVH

Query:  CLAFSFVNWSFL
        CLAF FVNWSF+
Subjt:  CLAFSFVNWSFL

Q6TAQ6 Homeobox-leucine zipper protein HOX106.1e-2350.89Show/hide
Query:  FANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTVH
        FAN+A LDMLE +LVALQD+TLD+I  +  ++   ++   LM+ G V                   Y+P+G+CMS MGRH SF+Q VAWKVL ED S VH
Subjt:  FANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTVH

Query:  CLAFSFVNWSFL
        CLAF FVNWSF+
Subjt:  CLAFSFVNWSFL

Q9SE43 Homeobox-leucine zipper protein REVOLUTA2.0e-2655.17Show/hide
Query:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLT---EDE
        MFANQA LDMLE TLVALQDITL++I  +S RK   +DF+ LMQ                    GFA +P+GIC+STMGRH S+EQ VAWKV     E+ 
Subjt:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLT---EDE

Query:  STVHCLAFSFVNWSFL
        + +HCLAFSFVNWSF+
Subjt:  STVHCLAFSFVNWSFL

Arabidopsis top hitse value%identityAlignment
AT1G30490.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein1.4e-2249.11Show/hide
Query:  FANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTVH
        FANQA LDMLE TLVALQDI LD+ L DS R+   ++F+ +MQ                    G+A +PAGIC+S+MGR  S+EQ   WKV+ ++ES  H
Subjt:  FANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTVH

Query:  CLAFSFVNWSFL
        CLAF+ V+WSF+
Subjt:  CLAFSFVNWSFL

AT1G52150.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein1.4e-2248.21Show/hide
Query:  FANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTVH
        FANQA LDMLE TLVALQDI+L++I  D+ RK   ++F  +MQ                    GFA +  GIC+S+MGR  S+E+ VAWKVL E+E+  H
Subjt:  FANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTVH

Query:  CLAFSFVNWSFL
        C+ F F+NWSF+
Subjt:  CLAFSFVNWSFL

AT1G52150.2 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein1.4e-2248.21Show/hide
Query:  FANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTVH
        FANQA LDMLE TLVALQDI+L++I  D+ RK   ++F  +MQ                    GFA +  GIC+S+MGR  S+E+ VAWKVL E+E+  H
Subjt:  FANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTVH

Query:  CLAFSFVNWSFL
        C+ F F+NWSF+
Subjt:  CLAFSFVNWSFL

AT2G34710.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein2.8e-2350Show/hide
Query:  FANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTVH
        FANQ  LDMLE TLVALQDI LD+ L +  RK   ++F  +MQ                    G+A++PAG+C S+MGR  S+EQ   WKVL +DES  H
Subjt:  FANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTVH

Query:  CLAFSFVNWSFL
        CLAF FVNWSF+
Subjt:  CLAFSFVNWSFL

AT5G60690.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein1.4e-2755.17Show/hide
Query:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLT---EDE
        MFANQA LDMLE TLVALQDITL++I  +S RK   +DF+ LMQ                    GFA +P+GIC+STMGRH S+EQ VAWKV     E+ 
Subjt:  MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLT---EDE

Query:  STVHCLAFSFVNWSFL
        + +HCLAFSFVNWSF+
Subjt:  STVHCLAFSFVNWSFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGCTAACCAAGCAGCCCTTGACATGTTGGAGATAACCTTGGTTGCCTTACAAGACATCACTTTGGATCAAATTCTTGGCGATTCTGCCCGCAAGTTCTTCTCTAC
TGATTTTTCCAGCTTAATGCAACCAGGTTTCGTACTATATTCTTCCCTTCAGTTCATTGTCATGCTCGACTTGGCATGGCTGGGCTTTGCTTACATTCCTGCTGGAATTT
GCATGTCGACAATGGGGCGACATGCATCCTTTGAACAAACCGTTGCATGGAAAGTTCTTACCGAGGATGAGTCTACTGTACACTGTCTTGCCTTCTCCTTCGTCAACTGG
TCATTCTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGCTAACCAAGCAGCCCTTGACATGTTGGAGATAACCTTGGTTGCCTTACAAGACATCACTTTGGATCAAATTCTTGGCGATTCTGCCCGCAAGTTCTTCTCTAC
TGATTTTTCCAGCTTAATGCAACCAGGTTTCGTACTATATTCTTCCCTTCAGTTCATTGTCATGCTCGACTTGGCATGGCTGGGCTTTGCTTACATTCCTGCTGGAATTT
GCATGTCGACAATGGGGCGACATGCATCCTTTGAACAAACCGTTGCATGGAAAGTTCTTACCGAGGATGAGTCTACTGTACACTGTCTTGCCTTCTCCTTCGTCAACTGG
TCATTCTTGTGA
Protein sequenceShow/hide protein sequence
MFANQAALDMLEITLVALQDITLDQILGDSARKFFSTDFSSLMQPGFVLYSSLQFIVMLDLAWLGFAYIPAGICMSTMGRHASFEQTVAWKVLTEDESTVHCLAFSFVNW
SFL