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CmoCh13G002730 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G002730
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCyclin-dependent protein kinase inhibitor SMR2
Genome locationCmo_Chr13:2223015..2223338
RNA-Seq ExpressionCmoCh13G002730
SyntenyCmoCh13G002730
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052125.1 cyclin-dependent protein kinase inhibitor SMR2 [Cucumis melo var. makuwa]8.0e-3072.07Show/hide
Query:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAV----DCGGESCRTPTSLRHRIPTARSYPTTPRKRKVASKRKFSDQSFFEVTGRGEVESLFALFYR
        MSQ HKSD +KV E PK  E GDRS EE G GEA+    D  GESCRTPTSLRHRIP A+S PTTPRK++VA KRK SDQSFFE TGRGEVESLF LFYR
Subjt:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAV----DCGGESCRTPTSLRHRIPTARSYPTTPRKRKVASKRKFSDQSFFEVTGRGEVESLFALFYR

Query:  VSSAKRRFTNI
        VSS+KRR T++
Subjt:  VSSAKRRFTNI

KAE8652786.1 hypothetical protein Csa_022878 [Cucumis sativus]1.8e-2169.23Show/hide
Query:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCG----GESCRTPTSLRHRIPTARSYPTTPRKRKVASKRKFSDQSFFEVTGRGEV
        MSQFHKSD QKV E P+ PE GDRS EE G GEA+       GESCRTPTS +HRIP A+S PTTPRK++V  KRKFSDQSFFE TGRGE+
Subjt:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCG----GESCRTPTSLRHRIPTARSYPTTPRKRKVASKRKFSDQSFFEVTGRGEV

KAG6583595.1 hypothetical protein SDJN03_19527, partial [Cucurbita argyrosperma subsp. sororia]1.6e-51100Show/hide
Query:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCGGESCRTPTSLRHRIPTARSYPTTPRKRKVASKRKFSDQSFFEVTGRGEVESLFALFYRVSSA
        MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCGGESCRTPTSLRHRIPTARSYPTTPRKRKVASKRKFSDQSFFEVTGRGEVESLFALFYRVSSA
Subjt:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCGGESCRTPTSLRHRIPTARSYPTTPRKRKVASKRKFSDQSFFEVTGRGEVESLFALFYRVSSA

Query:  KRRFTNI
        KRRFTNI
Subjt:  KRRFTNI

KAG6586014.1 hypothetical protein SDJN03_18747, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3173.64Show/hide
Query:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAV---DCGGESCRTPTSLRHRIPTARSYPTTPRKRKVASKRKFSDQSFFEVTGRGEVESLFALFYRV
        MS+F  SDHQK  EP KP EE DRSKEEDGG   +   D GGESCRTP+SL+HRIP ARS PTTPRK+KV SKRKFSDQSFFE T R EVESLF LFYRV
Subjt:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAV---DCGGESCRTPTSLRHRIPTARSYPTTPRKRKVASKRKFSDQSFFEVTGRGEVESLFALFYRV

Query:  SSAKRRFTNI
        SS KRR T+I
Subjt:  SSAKRRFTNI

KAG7019295.1 hypothetical protein SDJN02_18255, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-5098.13Show/hide
Query:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCGGESCRTPTSLRHRIPTARSYPTTPRKRKVASKRKFSDQSFFEVTGRGEVESLFALFYRVSSA
        MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDC GESCRTPTSLRHRIPTARSYPTTPRKRK+ASKRKFSDQSFFEVTGRGEVESLFALFYRVSSA
Subjt:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCGGESCRTPTSLRHRIPTARSYPTTPRKRKVASKRKFSDQSFFEVTGRGEVESLFALFYRVSSA

Query:  KRRFTNI
        KRRFTNI
Subjt:  KRRFTNI

TrEMBL top hitse value%identityAlignment
A0A0A0LV74 Uncharacterized protein1.9e-2170Show/hide
Query:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCG----GESCRTPTSLRHRIPTARSYPTTPRKRKVASKRKFSDQSFFEVTGRGE
        MSQFHKSD QKV E P+ PE GDRS EE G GEA+       GESCRTPTS +HRIP A+S PTTPRK++V  KRKFSDQSFFE TGRGE
Subjt:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCG----GESCRTPTSLRHRIPTARSYPTTPRKRKVASKRKFSDQSFFEVTGRGE

A0A251NNT8 Uncharacterized protein1.7e-0644.14Show/hide
Query:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCGGESCRTPTSLRHRIPTARSYPTTPRKRKVA--SKRKFSDQSFFEVTGRGEVESLFALFYRVS
        +S FH  DHQ   +PP+  +E D     D     +   G+ CRTPTS  H+IPT +S PTTPRK+  A   KRK +   FFE TGR EVES F   +   
Subjt:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCGGESCRTPTSLRHRIPTARSYPTTPRKRKVA--SKRKFSDQSFFEVTGRGEVESLFALFYRVS

Query:  S--AKRRFTNI
        S   K+R T+I
Subjt:  S--AKRRFTNI

A0A5D3BHE9 Cyclin-dependent protein kinase inhibitor SMR23.9e-3072.07Show/hide
Query:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAV----DCGGESCRTPTSLRHRIPTARSYPTTPRKRKVASKRKFSDQSFFEVTGRGEVESLFALFYR
        MSQ HKSD +KV E PK  E GDRS EE G GEA+    D  GESCRTPTSLRHRIP A+S PTTPRK++VA KRK SDQSFFE TGRGEVESLF LFYR
Subjt:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAV----DCGGESCRTPTSLRHRIPTARSYPTTPRKRKVASKRKFSDQSFFEVTGRGEVESLFALFYR

Query:  VSSAKRRFTNI
        VSS+KRR T++
Subjt:  VSSAKRRFTNI

A0A6J5V1P1 Uncharacterized protein1.3e-0646.85Show/hide
Query:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCGGESCRTPTSLRHRIPTARSYPTTPRKRKVA--SKRKFSDQSFFEVTGRGEVESLFALFYRVS
        +S FH  DHQ   +PP+  EE D + E     EA D     CRTPTS  H+IPT +S PTTPRK+  A   KRK +   FFE TGR EVES F   +   
Subjt:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCGGESCRTPTSLRHRIPTARSYPTTPRKRKVA--SKRKFSDQSFFEVTGRGEVESLFALFYRVS

Query:  S--AKRRFTNI
        S   K+R T+I
Subjt:  S--AKRRFTNI

A0A6J5XJV3 Uncharacterized protein1.3e-0646.85Show/hide
Query:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCGGESCRTPTSLRHRIPTARSYPTTPRKRKVA--SKRKFSDQSFFEVTGRGEVESLFALFYRVS
        +S FH  DHQ   +PP+  EE D + E     EA D     CRTPTS  H+IPT +S PTTPRK+  A   KRK +   FFE TGR EVES F   +   
Subjt:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCGGESCRTPTSLRHRIPTARSYPTTPRKRKVA--SKRKFSDQSFFEVTGRGEVESLFALFYRVS

Query:  S--AKRRFTNI
        S   K+R T+I
Subjt:  S--AKRRFTNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAATTTCACAAATCCGATCACCAAAAGGTAAAAGAACCACCAAAGCCACCGGAAGAAGGTGATCGGAGCAAGGAGGAAGACGGCGGCGGAGAAGCAGTGGATTG
TGGTGGAGAGAGCTGCCGAACTCCGACATCTCTCCGACATCGAATTCCCACCGCACGAAGCTACCCGACGACACCGAGAAAGCGGAAGGTTGCGAGCAAGAGGAAATTTT
CAGATCAAAGCTTCTTCGAGGTCACCGGACGGGGAGAGGTAGAATCCTTGTTTGCCTTATTTTACAGGGTTTCTTCTGCCAAAAGAAGATTTACAAATATATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCAATTTCACAAATCCGATCACCAAAAGGTAAAAGAACCACCAAAGCCACCGGAAGAAGGTGATCGGAGCAAGGAGGAAGACGGCGGCGGAGAAGCAGTGGATTG
TGGTGGAGAGAGCTGCCGAACTCCGACATCTCTCCGACATCGAATTCCCACCGCACGAAGCTACCCGACGACACCGAGAAAGCGGAAGGTTGCGAGCAAGAGGAAATTTT
CAGATCAAAGCTTCTTCGAGGTCACCGGACGGGGAGAGGTAGAATCCTTGTTTGCCTTATTTTACAGGGTTTCTTCTGCCAAAAGAAGATTTACAAATATATAA
Protein sequenceShow/hide protein sequence
MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCGGESCRTPTSLRHRIPTARSYPTTPRKRKVASKRKFSDQSFFEVTGRGEVESLFALFYRVSSAKRRFTNI