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CmoCh13G002910 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G002910
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 2, chloroplastic
Genome locationCmo_Chr13:2820937..2821311
RNA-Seq ExpressionCmoCh13G002910
SyntenyCmoCh13G002910
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0019684 - photosynthesis, light reaction (biological process)
GO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0005840 - ribosome (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsIPR001750 - NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QHN96891.1 NAD(P)H-quinone oxidoreductase subunit 2 A [Arachis hypogaea]3.1e-6296.77Show/hide
Query:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI
        MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGL+NTQMYNSPGIS ALIFITVGI
Subjt:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI

Query:  GFKLFPAPSHQWTPEVYEGVRFVR
        GFKL PAPSHQWTP+VYEGVRFVR
Subjt:  GFKLFPAPSHQWTPEVYEGVRFVR

WP_131767150.1 hypothetical protein [Candidatus Frankia datiscae]1.8e-6297.58Show/hide
Query:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI
        MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGIS ALIFITVGI
Subjt:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI

Query:  GFKLFPAPSHQWTPEVYEGVRFVR
        GFKL PAPSHQWTP+VYEGVRFVR
Subjt:  GFKLFPAPSHQWTPEVYEGVRFVR

WP_206438305.1 hypothetical protein [Candidatus Frankia datiscae]1.8e-6297.58Show/hide
Query:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI
        MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGIS ALIFITVGI
Subjt:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI

Query:  GFKLFPAPSHQWTPEVYEGVRFVR
        GFKL PAPSHQWTP+VYEGVRFVR
Subjt:  GFKLFPAPSHQWTPEVYEGVRFVR

YP_009447495.1 NADH dehydrogenase subunit 2 [Cucurbita maxima]1.8e-6297.58Show/hide
Query:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI
        MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGIS ALIFITVGI
Subjt:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI

Query:  GFKLFPAPSHQWTPEVYEGVRFVR
        GFKL PAPSHQWTP+VYEGVRFVR
Subjt:  GFKLFPAPSHQWTPEVYEGVRFVR

YP_009775178.1 NdhB [Begonia versicolor]1.8e-6297.58Show/hide
Query:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI
        MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGIS ALIFITVGI
Subjt:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI

Query:  GFKLFPAPSHQWTPEVYEGVRFVR
        GFKL PAPSHQWTP+VYEGVRFVR
Subjt:  GFKLFPAPSHQWTPEVYEGVRFVR

TrEMBL top hitse value%identityAlignment
A0A2H4T217 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic8.9e-6397.58Show/hide
Query:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI
        MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGIS ALIFITVGI
Subjt:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI

Query:  GFKLFPAPSHQWTPEVYEGVRFVR
        GFKL PAPSHQWTP+VYEGVRFVR
Subjt:  GFKLFPAPSHQWTPEVYEGVRFVR

A0A343AT46 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic1.5e-6296.77Show/hide
Query:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI
        MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGL+NTQMYNSPGIS ALIFITVGI
Subjt:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI

Query:  GFKLFPAPSHQWTPEVYEGVRFVR
        GFKL PAPSHQWTP+VYEGVRFVR
Subjt:  GFKLFPAPSHQWTPEVYEGVRFVR

A0A343AT61 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic1.5e-6296.77Show/hide
Query:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI
        MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGL+NTQMYNSPGIS ALIFITVGI
Subjt:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI

Query:  GFKLFPAPSHQWTPEVYEGVRFVR
        GFKL PAPSHQWTP+VYEGVRFVR
Subjt:  GFKLFPAPSHQWTPEVYEGVRFVR

A0A4Y5RD62 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic8.9e-6397.58Show/hide
Query:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI
        MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGIS ALIFITVGI
Subjt:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI

Query:  GFKLFPAPSHQWTPEVYEGVRFVR
        GFKL PAPSHQWTP+VYEGVRFVR
Subjt:  GFKLFPAPSHQWTPEVYEGVRFVR

A0A6H1XI52 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic8.9e-6397.58Show/hide
Query:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI
        MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGIS ALIFITVGI
Subjt:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI

Query:  GFKLFPAPSHQWTPEVYEGVRFVR
        GFKL PAPSHQWTP+VYEGVRFVR
Subjt:  GFKLFPAPSHQWTPEVYEGVRFVR

SwissProt top hitse value%identityAlignment
P0CC40 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic3.3e-6296.64Show/hide
Query:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI
        MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGL+NTQMYNSPGIS ALIFITVGI
Subjt:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI

Query:  GFKLFPAPSHQWTPEVYEG
        GFKL PAPSHQWTP+VYEG
Subjt:  GFKLFPAPSHQWTPEVYEG

P0CC48 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic6.0e-6495.16Show/hide
Query:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI
        MFLCGAND ITIFVAPECFSLCSYLLSGYTKKDVRSNEAT KYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGL+NTQMYNSPGIS ALIFITVGI
Subjt:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI

Query:  GFKLFPAPSHQWTPEVYEGVRFVR
        GFKL PAPSHQWTP+VYEGVRFVR
Subjt:  GFKLFPAPSHQWTPEVYEGVRFVR

P0CC49 NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic6.0e-6495.16Show/hide
Query:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI
        MFLCGAND ITIFVAPECFSLCSYLLSGYTKKDVRSNEAT KYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGL+NTQMYNSPGIS ALIFITVGI
Subjt:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI

Query:  GFKLFPAPSHQWTPEVYEGVRFVR
        GFKL PAPSHQWTP+VYEGVRFVR
Subjt:  GFKLFPAPSHQWTPEVYEGVRFVR

P0CC50 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic1.9e-6297.48Show/hide
Query:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI
        MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGIS ALIFITVGI
Subjt:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI

Query:  GFKLFPAPSHQWTPEVYEG
        GFKL PAPSHQWTP+VYEG
Subjt:  GFKLFPAPSHQWTPEVYEG

P0CC51 NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic1.9e-6297.48Show/hide
Query:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI
        MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGIS ALIFITVGI
Subjt:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI

Query:  GFKLFPAPSHQWTPEVYEG
        GFKL PAPSHQWTP+VYEG
Subjt:  GFKLFPAPSHQWTPEVYEG

Arabidopsis top hitse value%identityAlignment
ATCG00890.1 NADH-Ubiquinone/plastoquinone (complex I) protein2.2e-6194.12Show/hide
Query:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI
        MFLCGANDLITIFVAPECFSLCSYLLSGYTKKD+RSNEAT KYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGL+NTQMYNSPGIS ALIFITVGI
Subjt:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI

Query:  GFKLFPAPSHQWTPEVYEG
        GFKL  APSHQWTP+VYEG
Subjt:  GFKLFPAPSHQWTPEVYEG

ATCG01250.1 NADH-Ubiquinone/plastoquinone (complex I) protein2.2e-6194.12Show/hide
Query:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI
        MFLCGANDLITIFVAPECFSLCSYLLSGYTKKD+RSNEAT KYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGL+NTQMYNSPGIS ALIFITVGI
Subjt:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGI

Query:  GFKLFPAPSHQWTPEVYEG
        GFKL  APSHQWTP+VYEG
Subjt:  GFKLFPAPSHQWTPEVYEG

ATMG00285.1 NADH dehydrogenase 2A1.5e-1739.67Show/hide
Query:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGE--IELQEIVNGLLNTQMYNSPGISTALIFITV
        +F+  A+DLI +++A E  SLC Y+++   +K   S EA +KYL++G  SS IL+ G S +YGS+G     +L +I+ G   T    S GI   ++ I V
Subjt:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGE--IELQEIVNGLLNTQMYNSPGISTALIFITV

Query:  GIGFKLFPAPSHQWTPEVYEG
        G  FK+   P H W P++YEG
Subjt:  GIGFKLFPAPSHQWTPEVYEG

ATMG01320.1 NADH dehydrogenase 2B1.5e-1739.67Show/hide
Query:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGE--IELQEIVNGLLNTQMYNSPGISTALIFITV
        +F+  A+DLI +++A E  SLC Y+++   +K   S EA +KYL++G  SS IL+ G S +YGS+G     +L +I+ G   T    S GI   ++ I V
Subjt:  MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGE--IELQEIVNGLLNTQMYNSPGISTALIFITV

Query:  GIGFKLFPAPSHQWTPEVYEG
        G  FK+   P H W P++YEG
Subjt:  GIGFKLFPAPSHQWTPEVYEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTTATGCGGTGCTAATGATTTAATAACTATCTTTGTAGCTCCAGAATGTTTCAGTTTATGCTCCTACCTATTATCTGGATATACCAAGAAAGATGTACGGTCTAA
TGAGGCTACTACGAAATATTTACTCATGGGTGGGGCAAGTTCTTCTATTCTGGTTCATGGTTTCTCTTGGCTATATGGTTCATCCGGGGGAGAGATCGAGCTTCAAGAAA
TAGTAAATGGTCTTCTCAATACACAAATGTATAACTCTCCGGGAATTTCAACTGCGCTTATATTCATCACTGTAGGAATTGGGTTCAAGCTTTTCCCAGCCCCTTCTCAT
CAATGGACTCCTGAAGTATACGAAGGAGTGCGGTTCGTTCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTTATGCGGTGCTAATGATTTAATAACTATCTTTGTAGCTCCAGAATGTTTCAGTTTATGCTCCTACCTATTATCTGGATATACCAAGAAAGATGTACGGTCTAA
TGAGGCTACTACGAAATATTTACTCATGGGTGGGGCAAGTTCTTCTATTCTGGTTCATGGTTTCTCTTGGCTATATGGTTCATCCGGGGGAGAGATCGAGCTTCAAGAAA
TAGTAAATGGTCTTCTCAATACACAAATGTATAACTCTCCGGGAATTTCAACTGCGCTTATATTCATCACTGTAGGAATTGGGTTCAAGCTTTTCCCAGCCCCTTCTCAT
CAATGGACTCCTGAAGTATACGAAGGAGTGCGGTTCGTTCGATAA
Protein sequenceShow/hide protein sequence
MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISTALIFITVGIGFKLFPAPSH
QWTPEVYEGVRFVR