| GenBank top hits | e value | %identity | Alignment |
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| ATI24745.1 RNA polymerase beta [Plukenetia volubilis] | 1.2e-04 | 88.89 | Show/hide |
Query: SHFCTNSRYAYWALCINERESPRYLCK
SHF TNSRYAYWALCIN+RES RYLCK
Subjt: SHFCTNSRYAYWALCINERESPRYLCK
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| KAF1856161.1 hypothetical protein Lal_00044971 [Lupinus albus] | 3.3e-05 | 35.57 | Show/hide |
Query: LAVHVPFSLEAQAEGSHFCTNSRYAYWALCINERESPRYLCKLNPLFVIPLMQLELIARK---VDSPLWLARRLDQR-IRTPVGHSSLYLEIEGRVSLYK
+AVHVP SLEAQAE + S + I + L L+++ +K DSPLWL RLDQR I + ++ E G ++ +
Subjt: LAVHVPFSLEAQAEGSHFCTNSRYAYWALCINERESPRYLCKLNPLFVIPLMQLELIARK---VDSPLWLARRLDQR-IRTPVGHSSLYLEIEGRVSLYK
Query: VPGLLIWYITSEWHIHHTSWPGSNKDLGFQRAPATSISLGIADLFTIPS
+ LI + + H K LGF +A ATSISLGI DL TIPS
Subjt: VPGLLIWYITSEWHIHHTSWPGSNKDLGFQRAPATSISLGIADLFTIPS
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| KAG5615117.1 hypothetical protein H5410_014941 [Solanum commersonii] | 1.1e-05 | 69.44 | Show/hide |
Query: LAVHVPFSLEAQAEGSHFCTNSRYAYWALCINERES
+ HVP SLEAQ EGSHF TN+RYAYW LCIN + S
Subjt: LAVHVPFSLEAQAEGSHFCTNSRYAYWALCINERES
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| QCD88596.1 DNA-directed RNA polymerase subunit beta' [Vigna unguiculata] | 2.3e-06 | 38.6 | Show/hide |
Query: LAVHVPFSLEAQAEG-----SHFCTNSRYAYWALCINERESPRYLCKL----NPLF-----VIPLMQLELIARKVDSPLWLARRLDQR---IRTPVGHSS
+AVHVP SLEAQAE SH S + + ++ L L P F I Q + I DSPLWL + R IRT VGH S
Subjt: LAVHVPFSLEAQAEG-----SHFCTNSRYAYWALCINERESPRYLCKL----NPLF-----VIPLMQLELIARKVDSPLWLARRLDQR---IRTPVGHSS
Query: LYLEIE----GRVSLYKVPGLLIWYITSEWHIHHTSWPGSN-----KDLGFQRAPATSISLGIADLFTIPS
Y EIE G Y G I + S H S+ K LGF++A ATSISLGI DL TIPS
Subjt: LYLEIE----GRVSLYKVPGLLIWYITSEWHIHHTSWPGSN-----KDLGFQRAPATSISLGIADLFTIPS
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| YP_009574536.1 RNA polymerase beta' subunit [Neottia suzukii] | 1.6e-07 | 50.7 | Show/hide |
Query: LAVHVPFSLEAQAE-----------------------------GSHFCTNSRYAYWALCINERESPRYLCK
+AVHVP SLEAQAE GS F TNSRYAYW LCIN+RESPRYLCK
Subjt: LAVHVPFSLEAQAE-----------------------------GSHFCTNSRYAYWALCINERESPRYLCK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A291LRA6 DNA-directed RNA polymerase | 6.0e-05 | 88.89 | Show/hide |
Query: SHFCTNSRYAYWALCINERESPRYLCK
SHF TNSRYAYWALCIN+RES RYLCK
Subjt: SHFCTNSRYAYWALCINERESPRYLCK
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| A0A411P141 DNA-directed RNA polymerase subunit | 7.6e-08 | 50.7 | Show/hide |
Query: LAVHVPFSLEAQAE-----------------------------GSHFCTNSRYAYWALCINERESPRYLCK
+AVHVP SLEAQAE GS F TNSRYAYW LCIN+RESPRYLCK
Subjt: LAVHVPFSLEAQAE-----------------------------GSHFCTNSRYAYWALCINERESPRYLCK
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| A0A4D6LJT5 DNA-directed RNA polymerase subunit beta | 1.1e-06 | 38.6 | Show/hide |
Query: LAVHVPFSLEAQAEG-----SHFCTNSRYAYWALCINERESPRYLCKL----NPLF-----VIPLMQLELIARKVDSPLWLARRLDQR---IRTPVGHSS
+AVHVP SLEAQAE SH S + + ++ L L P F I Q + I DSPLWL + R IRT VGH S
Subjt: LAVHVPFSLEAQAEG-----SHFCTNSRYAYWALCINERESPRYLCKL----NPLF-----VIPLMQLELIARKVDSPLWLARRLDQR---IRTPVGHSS
Query: LYLEIE----GRVSLYKVPGLLIWYITSEWHIHHTSWPGSN-----KDLGFQRAPATSISLGIADLFTIPS
Y EIE G Y G I + S H S+ K LGF++A ATSISLGI DL TIPS
Subjt: LYLEIE----GRVSLYKVPGLLIWYITSEWHIHHTSWPGSN-----KDLGFQRAPATSISLGIADLFTIPS
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| A0A6A5L4T6 DNA-directed RNA polymerase subunit | 1.6e-05 | 35.57 | Show/hide |
Query: LAVHVPFSLEAQAEGSHFCTNSRYAYWALCINERESPRYLCKLNPLFVIPLMQLELIARK---VDSPLWLARRLDQR-IRTPVGHSSLYLEIEGRVSLYK
+AVHVP SLEAQAE + S + I + L L+++ +K DSPLWL RLDQR I + ++ E G ++ +
Subjt: LAVHVPFSLEAQAEGSHFCTNSRYAYWALCINERESPRYLCKLNPLFVIPLMQLELIARK---VDSPLWLARRLDQR-IRTPVGHSSLYLEIEGRVSLYK
Query: VPGLLIWYITSEWHIHHTSWPGSNKDLGFQRAPATSISLGIADLFTIPS
+ LI + + H K LGF +A ATSISLGI DL TIPS
Subjt: VPGLLIWYITSEWHIHHTSWPGSNKDLGFQRAPATSISLGIADLFTIPS
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| A0A6A5MY49 DNA-directed RNA polymerase subunit (Fragment) | 6.0e-05 | 33.96 | Show/hide |
Query: VHVPFSLEAQAEGSHFCTNSRYAYWALCINERESPRYLCKLNPLFVIPLMQLELIARK---VDSPLWLARRLDQRI----RTPV--------GHSSLYLE
VHVP SLEAQAE +H S + I + S L+++ +K DSPLW+ LDQR+ P+ + +Y
Subjt: VHVPFSLEAQAEGSHFCTNSRYAYWALCINERESPRYLCKLNPLFVIPLMQLELIARK---VDSPLWLARRLDQRI----RTPV--------GHSSLYLE
Query: IEGRVSLYKVPGLLIWYITSEW-HIHHTSWPGSNKDLGFQRAPATSISLGIADLFTIPS
LYK I I S + + + + GS+KD GF A ATSISL I DL TIPS
Subjt: IEGRVSLYKVPGLLIWYITSEW-HIHHTSWPGSNKDLGFQRAPATSISLGIADLFTIPS
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