; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh13G003260 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G003260
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionexopolygalacturonase-like
Genome locationCmo_Chr13:4042928..4043952
RNA-Seq ExpressionCmoCh13G003260
SyntenyCmoCh13G003260
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022927431.1 exopolygalacturonase-like, partial [Cucurbita moschata]2.5e-123100Show/hide
Query:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI
        ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI
Subjt:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI

Query:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS
        SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS
Subjt:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS

Query:  LGRYTNEEPVEGVIVNN
        LGRYTNEEPVEGVIVNN
Subjt:  LGRYTNEEPVEGVIVNN

XP_022927477.1 exopolygalacturonase-like [Cucurbita moschata]3.3e-12399.54Show/hide
Query:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI
        ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI
Subjt:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI

Query:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS
        SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHG+SIGS
Subjt:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS

Query:  LGRYTNEEPVEGVIVNN
        LGRYTNEEPVEGVIVNN
Subjt:  LGRYTNEEPVEGVIVNN

XP_022932204.1 exopolygalacturonase-like [Cucurbita moschata]1.6e-12299.08Show/hide
Query:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI
        ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI
Subjt:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI

Query:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS
        SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHG+SIGS
Subjt:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS

Query:  LGRYTNEEPVEGVIVNN
        LGRYTNEEPVEGVIV N
Subjt:  LGRYTNEEPVEGVIVNN

XP_022932205.1 exopolygalacturonase-like [Cucurbita moschata]9.5e-12399.08Show/hide
Query:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI
        ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLP 
Subjt:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI

Query:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS
        SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHG+SIGS
Subjt:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS

Query:  LGRYTNEEPVEGVIVNN
        LGRYTNEEPVEGVIVNN
Subjt:  LGRYTNEEPVEGVIVNN

XP_022933298.1 exopolygalacturonase-like [Cucurbita moschata]3.3e-12399.54Show/hide
Query:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI
        ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI
Subjt:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI

Query:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS
        SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHG+SIGS
Subjt:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS

Query:  LGRYTNEEPVEGVIVNN
        LGRYTNEEPVEGVIVNN
Subjt:  LGRYTNEEPVEGVIVNN

TrEMBL top hitse value%identityAlignment
A0A6J1EHA1 exopolygalacturonase-like1.6e-12399.54Show/hide
Query:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI
        ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI
Subjt:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI

Query:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS
        SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHG+SIGS
Subjt:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS

Query:  LGRYTNEEPVEGVIVNN
        LGRYTNEEPVEGVIVNN
Subjt:  LGRYTNEEPVEGVIVNN

A0A6J1EHN0 exopolygalacturonase-like1.2e-123100Show/hide
Query:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI
        ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI
Subjt:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI

Query:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS
        SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS
Subjt:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS

Query:  LGRYTNEEPVEGVIVNN
        LGRYTNEEPVEGVIVNN
Subjt:  LGRYTNEEPVEGVIVNN

A0A6J1EWD3 exopolygalacturonase-like7.9e-12399.08Show/hide
Query:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI
        ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI
Subjt:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI

Query:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS
        SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHG+SIGS
Subjt:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS

Query:  LGRYTNEEPVEGVIVNN
        LGRYTNEEPVEGVIV N
Subjt:  LGRYTNEEPVEGVIVNN

A0A6J1F1K6 exopolygalacturonase-like4.6e-12399.08Show/hide
Query:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI
        ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLP 
Subjt:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI

Query:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS
        SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHG+SIGS
Subjt:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS

Query:  LGRYTNEEPVEGVIVNN
        LGRYTNEEPVEGVIVNN
Subjt:  LGRYTNEEPVEGVIVNN

A0A6J1F4C6 exopolygalacturonase-like1.6e-12399.54Show/hide
Query:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI
        ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI
Subjt:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI

Query:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS
        SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHG+SIGS
Subjt:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS

Query:  LGRYTNEEPVEGVIVNN
        LGRYTNEEPVEGVIVNN
Subjt:  LGRYTNEEPVEGVIVNN

SwissProt top hitse value%identityAlignment
P24548 Exopolygalacturonase (Fragment)1.7e-6957.92Show/hide
Query:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQA---PKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKR-INCA
        AL  AWK+AC S   S I++P G F V     +GPC S I  QL GTL+A   P  ++G  WI   +ID LT+ G GVFDGQGK+AW +NDCHK    C 
Subjt:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQA---PKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKR-INCA

Query:  QLPISLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGV
         L ++LR   +TNSI++ +T+LDSKNFH+NV+GC NLTF    I+A E S NTDGIHIGRS+ + I  ++I TGDDCISLGDGSK INITN+TCGPGHG+
Subjt:  QLPISLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGV

Query:  SIGSLGRYTNEEPVEGVIVNN
        S+GSLGRY NEE V G+ V N
Subjt:  SIGSLGRYTNEEPVEGVIVNN

P35337 Polygalacturonase3.0e-6352.05Show/hide
Query:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAP-KSLQG-NNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQL
        A+  A+  AC +   S ++IP G FK+ E +  GPC SPI+F L G ++    S QG + W+ FE+I+   L+G G FDG+G AAWK N+CHK   C +L
Subjt:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAP-KSLQG-NNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQL

Query:  PISLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSI
        PIS+RF+F+ N+ +K +TSLD+KNFH NV+   N+TF NI I AP  SPNTDGIH+GR   + I  +KIATGDDCIS+GDG K + I  V CGPGHG+S+
Subjt:  PISLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSI

Query:  GSLGRYTNEEPVEGVIVNN
        GSLGRY  E+ V  + V N
Subjt:  GSLGRYTNEEPVEGVIVNN

Q39766 Polygalacturonase4.0e-6348.85Show/hide
Query:  NAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQA---PKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI
        +AWK+AC S   S +VIP G + + +   +GPC +PI+  + GT+QA   P + +  NW+ F  ++   + G G+FDGQG  A++KN C  R   ++LP+
Subjt:  NAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQA---PKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI

Query:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS
        ++RF+F+TN++++ ITS DSK FHINV  C N+T   + I AP+ SPNTDGIH+G+S  + I  S I TGDDCIS+GDG+K + I  +TCGPGHG+SIGS
Subjt:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS

Query:  LGRYTNEEPVEGVIVNN
        LG++ NEEPVEG+ ++N
Subjt:  LGRYTNEEPVEGVIVNN

Q39786 Polygalacturonase5.2e-6348.85Show/hide
Query:  NAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQA---PKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI
        +AWK+AC S   S +VIP G + + +   +GPC +PI+  + GT+QA   P + +  NW+ F  ++   + G G+FDGQG  A++KN C  R   ++LP+
Subjt:  NAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQA---PKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPI

Query:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS
        ++RF+F+TN++++ ITS DSK FHINV  C N+T   + I AP+ SPNTDGIH+G+S  + I  S I TGDDCIS+GDG+K + I  +TCGPGHG+SIGS
Subjt:  SLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGS

Query:  LGRYTNEEPVEGVIVNN
        LG++ NEEPVEG+ ++N
Subjt:  LGRYTNEEPVEGVIVNN

Q6H9K0 Exopolygalacturonase (Fragment)4.0e-6351.6Show/hide
Query:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPC-NSPIDFQLGGTLQA---PKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCA
        A+  AWK AC S   S ++IP G + + E   +GPC  S I FQ+ G ++A   P   + + W++F RID LT+SG G  DGQG+ AW KN+C K  NC 
Subjt:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPC-NSPIDFQLGGTLQA---PKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCA

Query:  QLPISLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGV
           ++LRF+F+ +++V+ ITSL+SK FHINVL C ++TF ++ +TAP  S NTDGIH+G S  + IT +KIATGDDCIS+G GS+ + IT V CGPGHG+
Subjt:  QLPISLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGV

Query:  SIGSLGRYTNEEPVEGVIV
        SIGSLGRY NE+ V G+ V
Subjt:  SIGSLGRYTNEEPVEGVIV

Arabidopsis top hitse value%identityAlignment
AT3G07820.1 Pectin lyase-like superfamily protein9.3e-6854.34Show/hide
Query:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAP-KSLQG-NNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQL
        AL  A+  AC S+  S +VIP G FK+ E   +GPC +PI+  L GT++A   ++QG   W+ F  ID   L+G G FDG+G AAW+ N+CHK   C +L
Subjt:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAP-KSLQG-NNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQL

Query:  PISLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSI
        PIS+RF+FI NS ++ I+S+D+KNFHINVLG  N+T +NI I APE+SPNTDGIH+GRS+ + I  S I+TGDDCIS+GDG K +++  VTCGPGHG+S+
Subjt:  PISLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSI

Query:  GSLGRYTNEEPVEGVIVNN
        GSLGRY +E+ V G+ V N
Subjt:  GSLGRYTNEEPVEGVIVNN

AT3G07830.1 Pectin lyase-like superfamily protein1.1e-6551.6Show/hide
Query:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAP-KSLQG-NNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQL
        AL  A+  AC S     +VIP G FK+ E +  GPC SP++  L GT+ A   S+ G   W+ F+R+D   L+G G FDG+G AAW+ N+CHK   C +L
Subjt:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAP-KSLQG-NNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQL

Query:  PISLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSI
        PIS+RF+F+TN+ ++ I+S+D+KNFHINV+G  N+TF N+ I AP  SPNTDGIH+GRS  ++I  S+I+TGDDC+S+GDG   + + NV CGPGHG+S+
Subjt:  PISLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSI

Query:  GSLGRYTNEEPVEGVIVNN
        GSLGRY +E+ V G+ V N
Subjt:  GSLGRYTNEEPVEGVIVNN

AT3G07840.1 Pectin lyase-like superfamily protein1.2e-6752.97Show/hide
Query:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAP-KSLQG-NNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQL
        AL  A+  AC +  +S +VI  G FK+ E    GPC +P++  L GTL+A  K++QG   W+ F RI+   L+G G+FDG+G AAW+ N+CHK   C +L
Subjt:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAP-KSLQG-NNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQL

Query:  PISLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSI
        PIS+RF+F+ N+ ++ I+S+D+KNFHINVLG  N+TF N+ + AP  SPNTDGIH+GRS  + I  SKIATGDDCIS+GDG K +++ NV CGPGHG+S+
Subjt:  PISLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSI

Query:  GSLGRYTNEEPVEGVIVNN
        GSLGRY +E+ V G+ V N
Subjt:  GSLGRYTNEEPVEGVIVNN

AT3G07850.1 Pectin lyase-like superfamily protein2.6e-6251.36Show/hide
Query:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGN----NWITFERIDRLTLSG-EGVFDGQGKAAWKKNDCHKRINC
        A A AWK+AC +   S I +P G + V+   FKGPC  P+  +L G  +AP +++       WI FE I   TL+G + +FDGQG  AWK NDC K   C
Subjt:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGN----NWITFERIDRLTLSG-EGVFDGQGKAAWKKNDCHKRINC

Query:  AQLPISLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHG
          LPI++RF  +TNS +  ITS +SK FH+N+L C N+T  +I I AP  S NTDGIHIGRSN + +  +KI TGDDC+S+GDG++ + + NV CGPGHG
Subjt:  AQLPISLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHG

Query:  VSIGSLGRYTNEEPVEGVIV
        +SIGSLGRY NE+PV+GV V
Subjt:  VSIGSLGRYTNEEPVEGVIV

AT5G48140.1 Pectin lyase-like superfamily protein5.1e-6651.83Show/hide
Query:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQG-NNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLP
        AL  A+ +AC     S ++IP G +K+ E +  GPC +PI   L GT++A  +  G   W+ F  I+   L+G GVFDG+G AAW+ N+CHK  NC +LP
Subjt:  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQG-NNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLP

Query:  ISLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIG
        IS+RF+F+T++ ++ ITSLD+K+FHINV+G  N+TF ++ I AP  SPNTDGIH+GRS+ I I  S I+TGDDC+S+GDG K + +  VTCGPGHG+SIG
Subjt:  ISLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIG

Query:  SLGRYTNEEPVEGVIVNN
        SLGRY++EE V G+ + N
Subjt:  SLGRYTNEEPVEGVIVNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTTTAGCAAATGCATGGAAGGATGCATGCACGTCCAATCGTTCTAGTGCGATTGTTATTCCGGGAGGGATATTTAAAGTAAAGGAAGGGATATTTAAAGGACCTTGTAA
TAGCCCAATTGACTTTCAACTTGGAGGAACATTGCAGGCACCAAAAAGTCTTCAGGGAAATAATTGGATTACTTTTGAACGTATTGATAGATTGACATTATCAGGTGAAG
GAGTTTTTGATGGCCAAGGAAAGGCAGCTTGGAAAAAGAATGATTGCCATAAACGCATAAATTGTGCCCAACTCCCCATTAGTTTGAGGTTCAACTTCATCACCAATTCA
ATCGTGAAGAGAATAACGTCACTTGATAGCAAGAACTTCCATATCAACGTCCTCGGCTGCAACAACCTCACATTCCATAATATCAATATAACTGCACCAGAAAACAGTCC
CAACACTGATGGAATACACATCGGTCGATCAAATAGGATCGCAATCACAATGTCCAAAATTGCAACAGGAGATGATTGCATTTCTCTTGGAGATGGAAGCAAACAAATTA
ACATCACCAACGTGACATGTGGGCCAGGACATGGCGTAAGCATCGGAAGTCTTGGAAGATACACTAACGAAGAACCCGTTGAAGGTGTCATCGTAAATAACTGA
mRNA sequenceShow/hide mRNA sequence
GCTTTAGCAAATGCATGGAAGGATGCATGCACGTCCAATCGTTCTAGTGCGATTGTTATTCCGGGAGGGATATTTAAAGTAAAGGAAGGGATATTTAAAGGACCTTGTAA
TAGCCCAATTGACTTTCAACTTGGAGGAACATTGCAGGCACCAAAAAGTCTTCAGGGAAATAATTGGATTACTTTTGAACGTATTGATAGATTGACATTATCAGGTGAAG
GAGTTTTTGATGGCCAAGGAAAGGCAGCTTGGAAAAAGAATGATTGCCATAAACGCATAAATTGTGCCCAACTCCCCATTAGTTTGAGGTTCAACTTCATCACCAATTCA
ATCGTGAAGAGAATAACGTCACTTGATAGCAAGAACTTCCATATCAACGTCCTCGGCTGCAACAACCTCACATTCCATAATATCAATATAACTGCACCAGAAAACAGTCC
CAACACTGATGGAATACACATCGGTCGATCAAATAGGATCGCAATCACAATGTCCAAAATTGCAACAGGAGATGATTGCATTTCTCTTGGAGATGGAAGCAAACAAATTA
ACATCACCAACGTGACATGTGGGCCAGGACATGGCGTAAGCATCGGAAGTCTTGGAAGATACACTAACGAAGAACCCGTTGAAGGTGTCATCGTAAATAACTGA
Protein sequenceShow/hide protein sequence
ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNS
IVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN