CuGenDBv2

Gene ID	CmoCh13G003440
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Reverse transcriptase
Genome location	Cmo_Chr13:4417165..4420958
RNA-Seq Expression	CmoCh13G003440
Synteny	CmoCh13G003440
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0015074 - DNA integration (biological process) GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:1901800 - positive regulation of proteasomal protein catabolic process (biological process) GO:0005634 - nucleus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0000502 - proteasome complex (cellular component) GO:0016887 - ATPase activity (molecular function) GO:0036402 - proteasome-activating ATPase activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0008194 - UDP-glycosyltransferase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0004519 - endonuclease activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR043502 - DNA/RNA polymerase superfamily IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR041588 - Integrase zinc-binding domain IPR041373 - Reverse transcriptase, RNase H-like domain IPR036397 - Ribonuclease H superfamily IPR012337 - Ribonuclease H-like superfamily IPR001584 - Integrase, catalytic core IPR000477 - Reverse transcriptase domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025848.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

73.79

Show/hide

Query:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV
        MR+CIDYRELNKVT+KN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+R+GDI KTAFRSRYGHYEF+VMSFGLTNAPA+FM+LMNRVFKEFLD+FV
Subjt:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV

Query:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK
        IVFID+IL+YSK+E +HE HL +VL  LRA +LYAKFSKCEFWL +V FLGHVVSS+G++VDPAKIEAV  W +P+TV+E+RSFLGLAGYYRRFV+DFS+
Subjt:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK

Query:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTW
        I+S LTQLT+KG PF W+P CE+SFQELK++LVTAPVLTVPDGSGN V+YSDAS KGLGCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK W
Subjt:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTW

Query:  RHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV-------------------EKLQDEMKRAGIDVVIKGGSVQIAQLT
        RHYLYGEK+Q++TDHKSLKY FTQKELNMRQRRWLELVKDYD EILYHPGKANV                     L  + +RA I V +   + Q+AQLT
Subjt:  RHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV-------------------EKLQDEMKRAGIDVVIKGGSVQIAQLT

Query:  IQPTLRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVS
        +QPTLR+K I AQ  D +L++    +ETE+  G+SIS D GL+++ RLCVP D  +  +++TEAH + +  HPGSTKMYQDL+  YWW GMKRD+ADFVS
Subjt:  IQPTLRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVS

Query:  RCLTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTR
        RCL CQQVKAPRQ PAGLLQPLSVP WKW +V MDFI+GLPKT +G+ VIWV+VDRLTK+AHF+ GKSTY   +W QLY+ EIVRLHGVPVSI+SDRD R
Subjt:  RCLTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTR

Query:  FTSQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM
        FTS+FW+ LQ AL T+L FSTAFHPQTDGQTERLNQ+LEDMLRAC L+F+G WD HL LMEFAYNNSYQATI MAPFEALYG+ CR+PV W EVG Q+++
Subjt:  FTSQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM

Query:  GPELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNLEFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNVFHV
        GPELVQ TNAA+QKI+ R+LTAQSRQKSYADVRR++LEFEVGD VFLKVAPM+GV RF K+GKLSPRF+GPFEIL+R+G VAYR+ALPP+ AAVH+VFH+
Subjt:  GPELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNLEFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0031437.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

73.79

Show/hide

Query:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV
        MR+CIDYRELNKVT+KN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+R+GDI KTAFRSRYGHYEF+VMSFGLTNAPA+FM+LMNRVFKEFLD+FV
Subjt:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV

Query:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK
        IVFID+IL+YSK+E +HE HL +VL  LRA +LYAKFSKCEFWL +V FLGHVVSS+G++VDPAKIEAV  W +P+TV+E+RSFLGLAGYYRRFV+DFS+
Subjt:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK

Query:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTW
        I+S LTQLT+KG PF W+P CE+SFQELK++LVTAPVLTVPDGSGN V+YSDAS KGLGCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK W
Subjt:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTW

Query:  RHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV-------------------EKLQDEMKRAGIDVVIKGGSVQIAQLT
        RHYLYGEK+Q++TDHKSLKY FTQKELNMRQRRWLELVKDYD EILYHPGKANV                     L  + +RA I V +   + Q+AQLT
Subjt:  RHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV-------------------EKLQDEMKRAGIDVVIKGGSVQIAQLT

Query:  IQPTLRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVS
        +QPTLR+K I AQ  D +L++    +ETE+  G+SIS D GL+++ RLCVP D  +  +++TEAH + +  HPGSTKMYQDL+  YWW GMKRD+ADFVS
Subjt:  IQPTLRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVS

Query:  RCLTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTR
        RCL CQQVKAPRQ PAGLLQPLSVP WKW +V MDFI+GLPKT +G+ VIWV+VDRLTK+AHF+ GKSTY   +W QLY+ EIVRLHGVPVSI+SDRD R
Subjt:  RCLTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTR

Query:  FTSQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM
        FTS+FW+ LQ AL T+L FSTAFHPQTDGQTERLNQ+LEDMLRAC L+F+G WD HL LMEFAYNNSYQATI MAPFEALYG+ CR+PV W EVG Q+++
Subjt:  FTSQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM

Query:  GPELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNLEFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNVFHV
        GPELVQ TNAA+QKI+ R+LTAQSRQKSYADVRR++LEFEVGD VFLKVAPM+GV RF K+GKLSPRF+GPFEIL+R+G VAYR+ALPP+ AAVH+VFH+
Subjt:  GPELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNLEFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0033825.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

73.79

Show/hide

Query:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV
        MR+CIDYRELNKVT+KN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+R+GDI KTAFRSRYGHYEF+VMSFGLTNAPA+FM+LMNRVFKEFLD+FV
Subjt:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV

Query:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK
        IVFID+IL+YSK+E +HE HL +VL  LRA +LYAKFSKCEFWL +V FLGHVVSS+G++VDPAKIEAV  W +P+TV+E+RSFLGLAGYYRRFV+DFS+
Subjt:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK

Query:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTW
        I+S LTQLT+KG PF W+P CE+SFQELK++LVTAPVLTVPDGSGN V+YSDAS KGLGCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK W
Subjt:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTW

Query:  RHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV-------------------EKLQDEMKRAGIDVVIKGGSVQIAQLT
        RHYLYGEK+Q++TDHKSLKY FTQKELNMRQRRWLELVKDYD EILYHPGKANV                     L  + +RA I V +   + Q+AQLT
Subjt:  RHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV-------------------EKLQDEMKRAGIDVVIKGGSVQIAQLT

Query:  IQPTLRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVS
        +QPTLR+K I AQ  D +L++    +ETE+  G+SIS D GL+++ RLCVP D  +  +++TEAH + +  HPGSTKMYQDL+  YWW GMKRD+ADFVS
Subjt:  IQPTLRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVS

Query:  RCLTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTR
        RCL CQQVKAPRQ PAGLLQPLSVP WKW +V MDFI+GLPKT +G+ VIWV+VDRLTK+AHF+ GKSTY   +W QLY+ EIVRLHGVPVSI+SDRD R
Subjt:  RCLTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTR

Query:  FTSQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM
        FTS+FW+ LQ AL T+L FSTAFHPQTDGQTERLNQ+LEDMLRAC L+F+G WD HL LMEFAYNNSYQATI MAPFEALYG+ CR+PV W EVG Q+++
Subjt:  FTSQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM

Query:  GPELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNLEFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNVFHV
        GPELVQ TNAA+QKI+ R+LTAQSRQKSYADVRR++LEFEVGD VFLKVAPM+GV RF K+GKLSPRF+GPFEIL+R+G VAYR+ALPP+ AAVH+VFH+
Subjt:  GPELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNLEFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

TYK28422.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

73.79

Show/hide

Query:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV
        MR+CIDYRELNKVT+KN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+R+GDI KTAFRSRYGHYEF+VMSFGLTNAPA+FM+LMNRVFKEFLD+FV
Subjt:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV

Query:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK
        IVFID+IL+YSK+E +HE HL +VL  LRA +LYAKFSKCEFWL +V FLGHVVSS+G++VDPAKIEAV  W +P+TV+E+RSFLGLAGYYRRFV+DFS+
Subjt:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK

Query:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTW
        I+S LTQLT+KG PF W+P CE+SFQELK++LVTAPVLTVPDGSGN V+YSDAS KGLGCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK W
Subjt:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTW

Query:  RHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV-------------------EKLQDEMKRAGIDVVIKGGSVQIAQLT
        RHYLYGEK+Q++TDHKSLKY FTQKELNMRQRRWLELVKDYD EILYHPGKANV                     L  + +RA I V +   + Q+AQLT
Subjt:  RHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV-------------------EKLQDEMKRAGIDVVIKGGSVQIAQLT

Query:  IQPTLRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVS
        +QPTLR+K I AQ  D +L++    +ETE+  G+SIS D GL+++ RLCVP D  +  +++TEAH + +  HPGSTKMYQDL+  YWW GMKRD+ADFVS
Subjt:  IQPTLRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVS

Query:  RCLTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTR
        RCL CQQVKAPRQ PAGLLQPLSVP WKW +V MDFI+GLPKT +G+ VIWV+VDRLTK+AHF+ GKSTY   +W QLY+ EIVRLHGVPVSI+SDRD R
Subjt:  RCLTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTR

Query:  FTSQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM
        FTS+FW+ LQ AL T+L FSTAFHPQTDGQTERLNQ+LEDMLRAC L+F+G WD HL LMEFAYNNSYQATI MAPFEALYG+ CR+PV W EVG Q+++
Subjt:  FTSQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM

Query:  GPELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNLEFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNVFHV
        GPELVQ TNAA+QKI+ R+LTAQSRQKSYADVRR++LEFEVGD VFLKVAPM+GV RF K+GKLSPRF+GPFEIL+R+G VAYR+ALPP+ AAVH+VFH+
Subjt:  GPELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNLEFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

XP_022931734.1 uncharacterized protein LOC111437896 [Cucurbita moschata]

0.0e+00

81.99

Show/hide

Query:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV
        MR+CIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQ+R+RE DI KTAFRSRYGHYEF+VMSFGLTNAPA+FMELMNRVFKEFLDTFV
Subjt:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV

Query:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK
        IVFID+ILVYSKSE++HE HLR+VLT+LR  +LYAKFSKCEFWL EVAFLGHVVSS+G+TVDPAKIEAV++WP+PTTVTEVRSFLGLAGYYRRF++DFSK
Subjt:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK

Query:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTW
        +S+ALTQLTKKGKPF WT  CEQSF ELKKRLVTAPVLTVPDGSG LVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVV+ALKTW
Subjt:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTW

Query:  RHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV-------------------EKLQDEMKRAGIDVVIKGGSVQIAQLT
        RHYLYGE+VQV+TDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV                   + LQDE++RAGI+V+ +G + Q+AQL+
Subjt:  RHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV-------------------EKLQDEMKRAGIDVVIKGGSVQIAQLT

Query:  IQPTLRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVS
        +QPTL+++ I+AQR+D HLS++W Q ETERP GYS+S +GGL+WQ+RLCVPRDE IL++IMTEAH+TSY FHPGSTKMYQDLK  YWW GMK+D+A++VS
Subjt:  IQPTLRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVS

Query:  RCLTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTR
        RCLTCQQVKAPRQRPAGLLQPL++PQWKW  + MDFI+GLPKT++GFNVIWVIVDRLTK AHFI G++TYRVD+WA+LY+KEI+RLHGVPV+IVSDRD +
Subjt:  RCLTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTR

Query:  FTSQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM
        FTS FW+ LQKAL TQL+F+TAFHPQTDGQTERLNQ LEDMLRAC +DFAGCWDEHL LMEFAYNNSYQATIQMAPFEALYGRRCRTP+FWEEVG +QL+
Subjt:  FTSQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM

Query:  GPELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNLEFEVGDHVFLKVAPMRGV
        GPELVQ TNAAVQKIKQRIL+AQSRQKSYAD RR++LEF VGDHVFLKVAPMRGV
Subjt:  GPELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNLEFEVGDHVFLKVAPMRGV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TEQ2 Reverse transcriptase

0.0e+00

73.79

Show/hide

Query:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV
        MR+CIDYRELNKVT+KN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+R+GDI KTAFRSRYGHYEF+VMSFGLTNAPA+FM+LMNRVFKEFLD+FV
Subjt:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV

Query:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK
        IVFID+IL+YSK+E +HE HL +VL  LRA +LYAKFSKCEFWL +V FLGHVVSS+G++VDPAKIEAV  W +P+TV+E+RSFLGLAGYYRRFV+DFS+
Subjt:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK

Query:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTW
        I+S LTQLT+KG PF W+P CE+SFQELK++LVTAPVLTVPDGSGN V+YSDAS KGLGCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK W
Subjt:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTW

Query:  RHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV-------------------EKLQDEMKRAGIDVVIKGGSVQIAQLT
        RHYLYGEK+Q++TDHKSLKY FTQKELNMRQRRWLELVKDYD EILYHPGKANV                     L  + +RA I V +   + Q+AQLT
Subjt:  RHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV-------------------EKLQDEMKRAGIDVVIKGGSVQIAQLT

Query:  IQPTLRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVS
        +QPTLR+K I AQ  D +L++    +ETE+  G+SIS D GL+++ RLCVP D  +  +++TEAH + +  HPGSTKMYQDL+  YWW GMKRD+ADFVS
Subjt:  IQPTLRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVS

Query:  RCLTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTR
        RCL CQQVKAPRQ PAGLLQPLSVP WKW +V MDFI+GLPKT +G+ VIWV+VDRLTK+AHF+ GKSTY   +W QLY+ EIVRLHGVPVSI+SDRD R
Subjt:  RCLTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTR

Query:  FTSQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM
        FTS+FW+ LQ AL T+L FSTAFHPQTDGQTERLNQ+LEDMLRAC L+F+G WD HL LMEFAYNNSYQATI MAPFEALYG+ CR+PV W EVG Q+++
Subjt:  FTSQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM

Query:  GPELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNLEFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNVFHV
        GPELVQ TNAA+QKI+ R+LTAQSRQKSYADVRR++LEFEVGD VFLKVAPM+GV RF K+GKLSPRF+GPFEIL+R+G VAYR+ALPP+ AAVH+VFH+
Subjt:  GPELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNLEFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7TSL0 Reverse transcriptase

0.0e+00

73.79

Show/hide

Query:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV
        MR+CIDYRELNKVT+KN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+R+GDI KTAFRSRYGHYEF+VMSFGLTNAPA+FM+LMNRVFKEFLD+FV
Subjt:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV

Query:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK
        IVFID+IL+YSK+E +HE HL +VL  LRA +LYAKFSKCEFWL +V FLGHVVSS+G++VDPAKIEAV  W +P+TV+E+RSFLGLAGYYRRFV+DFS+
Subjt:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK

Query:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTW
        I+S LTQLT+KG PF W+P CE+SFQELK++LVTAPVLTVPDGSGN V+YSDAS KGLGCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK W
Subjt:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTW

Query:  RHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV-------------------EKLQDEMKRAGIDVVIKGGSVQIAQLT
        RHYLYGEK+Q++TDHKSLKY FTQKELNMRQRRWLELVKDYD EILYHPGKANV                     L  + +RA I V +   + Q+AQLT
Subjt:  RHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV-------------------EKLQDEMKRAGIDVVIKGGSVQIAQLT

Query:  IQPTLRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVS
        +QPTLR+K I AQ  D +L++    +ETE+  G+SIS D GL+++ RLCVP D  +  +++TEAH + +  HPGSTKMYQDL+  YWW GMKRD+ADFVS
Subjt:  IQPTLRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVS

Query:  RCLTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTR
        RCL CQQVKAPRQ PAGLLQPLSVP WKW +V MDFI+GLPKT +G+ VIWV+VDRLTK+AHF+ GKSTY   +W QLY+ EIVRLHGVPVSI+SDRD R
Subjt:  RCLTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTR

Query:  FTSQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM
        FTS+FW+ LQ AL T+L FSTAFHPQTDGQTERLNQ+LEDMLRAC L+F+G WD HL LMEFAYNNSYQATI MAPFEALYG+ CR+PV W EVG Q+++
Subjt:  FTSQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM

Query:  GPELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNLEFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNVFHV
        GPELVQ TNAA+QKI+ R+LTAQSRQKSYADVRR++LEFEVGD VFLKVAPM+GV RF K+GKLSPRF+GPFEIL+R+G VAYR+ALPP+ AAVH+VFH+
Subjt:  GPELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNLEFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7UBS1 Reverse transcriptase

0.0e+00

73.79

Show/hide

Query:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV
        MR+CIDYRELNKVT+KN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+R+GDI KTAFRSRYGHYEF+VMSFGLTNAPA+FM+LMNRVFKEFLD+FV
Subjt:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV

Query:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK
        IVFID+IL+YSK+E +HE HL +VL  LRA +LYAKFSKCEFWL +V FLGHVVSS+G++VDPAKIEAV  W +P+TV+E+RSFLGLAGYYRRFV+DFS+
Subjt:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK

Query:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTW
        I+S LTQLT+KG PF W+P CE+SFQELK++LVTAPVLTVPDGSGN V+YSDAS KGLGCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK W
Subjt:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTW

Query:  RHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV-------------------EKLQDEMKRAGIDVVIKGGSVQIAQLT
        RHYLYGEK+Q++TDHKSLKY FTQKELNMRQRRWLELVKDYD EILYHPGKANV                     L  + +RA I V +   + Q+AQLT
Subjt:  RHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV-------------------EKLQDEMKRAGIDVVIKGGSVQIAQLT

Query:  IQPTLRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVS
        +QPTLR+K I AQ  D +L++    +ETE+  G+SIS D GL+++ RLCVP D  +  +++TEAH + +  HPGSTKMYQDL+  YWW GMKRD+ADFVS
Subjt:  IQPTLRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVS

Query:  RCLTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTR
        RCL CQQVKAPRQ PAGLLQPLSVP WKW +V MDFI+GLPKT +G+ VIWV+VDRLTK+AHF+ GKSTY   +W QLY+ EIVRLHGVPVSI+SDRD R
Subjt:  RCLTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTR

Query:  FTSQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM
        FTS+FW+ LQ AL T+L FSTAFHPQTDGQTERLNQ+LEDMLRAC L+F+G WD HL LMEFAYNNSYQATI MAPFEALYG+ CR+PV W EVG Q+++
Subjt:  FTSQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM

Query:  GPELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNLEFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNVFHV
        GPELVQ TNAA+QKI+ R+LTAQSRQKSYADVRR++LEFEVGD VFLKVAPM+GV RF K+GKLSPRF+GPFEIL+R+G VAYR+ALPP+ AAVH+VFH+
Subjt:  GPELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNLEFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5D3CQB5 Reverse transcriptase

0.0e+00

73.79

Show/hide

Query:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV
        MR+CIDYRELNKVT+KN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+R+GDI KTAFRSRYGHYEF+VMSFGLTNAPA+FM+LMNRVFKEFLD+FV
Subjt:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV

Query:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK
        IVFID+IL+YSK+E +HE HL +VL  LRA +LYAKFSKCEFWL +V FLGHVVSS+G++VDPAKIEAV  W +P+TV+E+RSFLGLAGYYRRFV+DFS+
Subjt:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK

Query:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTW
        I+S LTQLT+KG PF W+P CE+SFQELK++LVTAPVLTVPDGSGN V+YSDAS KGLGCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK W
Subjt:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTW

Query:  RHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV-------------------EKLQDEMKRAGIDVVIKGGSVQIAQLT
        RHYLYGEK+Q++TDHKSLKY FTQKELNMRQRRWLELVKDYD EILYHPGKANV                     L  + +RA I V +   + Q+AQLT
Subjt:  RHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV-------------------EKLQDEMKRAGIDVVIKGGSVQIAQLT

Query:  IQPTLRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVS
        +QPTLR+K I AQ  D +L++    +ETE+  G+SIS D GL+++ RLCVP D  +  +++TEAH + +  HPGSTKMYQDL+  YWW GMKRD+ADFVS
Subjt:  IQPTLRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVS

Query:  RCLTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTR
        RCL CQQVKAPRQ PAGLLQPLSVP WKW +V MDFI+GLPKT +G+ VIWV+VDRLTK+AHF+ GKSTY   +W QLY+ EIVRLHGVPVSI+SDRD R
Subjt:  RCLTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTR

Query:  FTSQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM
        FTS+FW+ LQ AL T+L FSTAFHPQTDGQTERLNQ+LEDMLRAC L+F+G WD HL LMEFAYNNSYQATI MAPFEALYG+ CR+PV W EVG Q+++
Subjt:  FTSQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM

Query:  GPELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNLEFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNVFHV
        GPELVQ TNAA+QKI+ R+LTAQSRQKSYADVRR++LEFEVGD VFLKVAPM+GV RF K+GKLSPRF+GPFEIL+R+G VAYR+ALPP+ AAVH+VFH+
Subjt:  GPELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNLEFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A6J1EV26 Reverse transcriptase

0.0e+00

81.99

Show/hide

Query:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV
        MR+CIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQ+R+RE DI KTAFRSRYGHYEF+VMSFGLTNAPA+FMELMNRVFKEFLDTFV
Subjt:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV

Query:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK
        IVFID+ILVYSKSE++HE HLR+VLT+LR  +LYAKFSKCEFWL EVAFLGHVVSS+G+TVDPAKIEAV++WP+PTTVTEVRSFLGLAGYYRRF++DFSK
Subjt:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK

Query:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTW
        +S+ALTQLTKKGKPF WT  CEQSF ELKKRLVTAPVLTVPDGSG LVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVV+ALKTW
Subjt:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTW

Query:  RHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV-------------------EKLQDEMKRAGIDVVIKGGSVQIAQLT
        RHYLYGE+VQV+TDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV                   + LQDE++RAGI+V+ +G + Q+AQL+
Subjt:  RHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANV-------------------EKLQDEMKRAGIDVVIKGGSVQIAQLT

Query:  IQPTLRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVS
        +QPTL+++ I+AQR+D HLS++W Q ETERP GYS+S +GGL+WQ+RLCVPRDE IL++IMTEAH+TSY FHPGSTKMYQDLK  YWW GMK+D+A++VS
Subjt:  IQPTLRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVS

Query:  RCLTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTR
        RCLTCQQVKAPRQRPAGLLQPL++PQWKW  + MDFI+GLPKT++GFNVIWVIVDRLTK AHFI G++TYRVD+WA+LY+KEI+RLHGVPV+IVSDRD +
Subjt:  RCLTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTR

Query:  FTSQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM
        FTS FW+ LQKAL TQL+F+TAFHPQTDGQTERLNQ LEDMLRAC +DFAGCWDEHL LMEFAYNNSYQATIQMAPFEALYGRRCRTP+FWEEVG +QL+
Subjt:  FTSQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM

Query:  GPELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNLEFEVGDHVFLKVAPMRGV
        GPELVQ TNAAVQKIKQRIL+AQSRQKSYAD RR++LEF VGDHVFLKVAPMRGV
Subjt:  GPELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNLEFEVGDHVFLKVAPMRGV

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

3.5e-128

32.8

Show/hide

Query:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV
        +RM +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +RVR+GD  K AFR   G +E+LVM +G++ APA F   +N +  E  ++ V
Subjt:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV

Query:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK
        + ++D+IL++SKSE +H  H++ VL  L+   L    +KCEF  S+V F+G+ +S KG T     I+ V++W QP    E+R FLG   Y R+F+   S+
Subjt:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK

Query:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVF
        ++  L  L KK   + WTP   Q+ + +K+ LV+ PVL   D S  +++ +DAS   +G VL QK        + Y S ++ + + NY   D E+ A++ 
Subjt:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVF

Query:  ALKTWRHYLYG--EKVQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHPGKAN-----VEKLQDEMKRAGIDVVIKGGSVQ-IAQLTIQPT
        +LK WRHYL    E  ++ TDH++L    T +    N R  RW   ++D++ EI Y PG AN     + ++ DE +    D   +  S+  + Q++I   
Subjt:  ALKTWRHYLYG--EKVQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHPGKAN-----VEKLQDEMKRAGIDVVIKGGSVQ-IAQLTIQPT

Query:  LRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLL--WQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRC
         + + +    +D  L  + +    ++    +I L  GLL   ++++ +P D  + + I+ + H+   + HPG   +   + R + W G+++ I ++V  C
Subjt:  LRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLL--WQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRC

Query:  LTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTRFT
         TCQ  K+   +P G LQP+   +  W ++ MDFI+ LP++  G+N ++V+VDR +K A  +    +   ++ A+++ + ++   G P  I++D D  FT
Subjt:  LTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTRFT

Query:  SQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLMGP
        SQ W+         ++FS  + PQTDGQTER NQ +E +LR         W +H+ L++ +YNN+  +  QM PFE ++  R    +   E+ +      
Subjt:  SQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLMGP

Query:  ELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNL-EFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAV-HNVFHV
        E  Q T    Q +K+ + T   + K Y D++ + + EF+ GD V +K           K  KL+P F GPF +L + G   Y + LP ++  +  + FHV
Subjt:  ELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNL-EFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAV-HNVFHV

Query:  SMLRKIEY
        S L K  +
Subjt:  SMLRKIEY

P0CT41 Transposon Tf2-12 polyprotein

3.5e-128

32.8

Show/hide

Query:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV
        +RM +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +RVR+GD  K AFR   G +E+LVM +G++ APA F   +N +  E  ++ V
Subjt:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV

Query:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK
        + ++D+IL++SKSE +H  H++ VL  L+   L    +KCEF  S+V F+G+ +S KG T     I+ V++W QP    E+R FLG   Y R+F+   S+
Subjt:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK

Query:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVF
        ++  L  L KK   + WTP   Q+ + +K+ LV+ PVL   D S  +++ +DAS   +G VL QK        + Y S ++ + + NY   D E+ A++ 
Subjt:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVF

Query:  ALKTWRHYLYG--EKVQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHPGKAN-----VEKLQDEMKRAGIDVVIKGGSVQ-IAQLTIQPT
        +LK WRHYL    E  ++ TDH++L    T +    N R  RW   ++D++ EI Y PG AN     + ++ DE +    D   +  S+  + Q++I   
Subjt:  ALKTWRHYLYG--EKVQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHPGKAN-----VEKLQDEMKRAGIDVVIKGGSVQ-IAQLTIQPT

Query:  LRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLL--WQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRC
         + + +    +D  L  + +    ++    +I L  GLL   ++++ +P D  + + I+ + H+   + HPG   +   + R + W G+++ I ++V  C
Subjt:  LRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLL--WQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRC

Query:  LTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTRFT
         TCQ  K+   +P G LQP+   +  W ++ MDFI+ LP++  G+N ++V+VDR +K A  +    +   ++ A+++ + ++   G P  I++D D  FT
Subjt:  LTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTRFT

Query:  SQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLMGP
        SQ W+         ++FS  + PQTDGQTER NQ +E +LR         W +H+ L++ +YNN+  +  QM PFE ++  R    +   E+ +      
Subjt:  SQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLMGP

Query:  ELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNL-EFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAV-HNVFHV
        E  Q T    Q +K+ + T   + K Y D++ + + EF+ GD V +K           K  KL+P F GPF +L + G   Y + LP ++  +  + FHV
Subjt:  ELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNL-EFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAV-HNVFHV

Query:  SMLRKIEY
        S L K  +
Subjt:  SMLRKIEY

P0CT42 Transposon Tf2-7 polyprotein

1.6e-128

32.92

Show/hide

Query:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV
        +RM +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +RVR+GD  K AFR   G +E+LVM +G++ APA F   +N +  E  ++ V
Subjt:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV

Query:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK
        + ++DNIL++SKSE +H  H++ VL  L+   L    +KCEF  S+V F+G+ +S KG T     I+ V++W QP    E+R FLG   Y R+F+   S+
Subjt:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK

Query:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVF
        ++  L  L KK   + WTP   Q+ + +K+ LV+ PVL   D S  +++ +DAS   +G VL QK        + Y S ++ + + NY   D E+ A++ 
Subjt:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVF

Query:  ALKTWRHYLYG--EKVQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHPGKAN-----VEKLQDEMKRAGIDVVIKGGSVQ-IAQLTIQPT
        +LK WRHYL    E  ++ TDH++L    T +    N R  RW   ++D++ EI Y PG AN     + ++ DE +    D   +  S+  + Q++I   
Subjt:  ALKTWRHYLYG--EKVQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHPGKAN-----VEKLQDEMKRAGIDVVIKGGSVQ-IAQLTIQPT

Query:  LRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLL--WQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRC
         + + +    +D  L  + +    ++    +I L  GLL   ++++ +P D  + + I+ + H+   + HPG   +   + R + W G+++ I ++V  C
Subjt:  LRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLL--WQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRC

Query:  LTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTRFT
         TCQ  K+   +P G LQP+   +  W ++ MDFI+ LP++  G+N ++V+VDR +K A  +    +   ++ A+++ + ++   G P  I++D D  FT
Subjt:  LTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTRFT

Query:  SQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLMGP
        SQ W+         ++FS  + PQTDGQTER NQ +E +LR         W +H+ L++ +YNN+  +  QM PFE ++  R    +   E+ +      
Subjt:  SQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLMGP

Query:  ELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNL-EFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAV-HNVFHV
        E  Q T    Q +K+ + T   + K Y D++ + + EF+ GD V +K           K  KL+P F GPF +L + G   Y + LP ++  +  + FHV
Subjt:  ELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNL-EFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAV-HNVFHV

Query:  SMLRKIEY
        S L K  +
Subjt:  SMLRKIEY

P0CT43 Transposon Tf2-8 polyprotein

1.6e-128

32.92

Show/hide

Query:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV
        +RM +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +RVR+GD  K AFR   G +E+LVM +G++ APA F   +N +  E  ++ V
Subjt:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV

Query:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK
        + ++DNIL++SKSE +H  H++ VL  L+   L    +KCEF  S+V F+G+ +S KG T     I+ V++W QP    E+R FLG   Y R+F+   S+
Subjt:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK

Query:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVF
        ++  L  L KK   + WTP   Q+ + +K+ LV+ PVL   D S  +++ +DAS   +G VL QK        + Y S ++ + + NY   D E+ A++ 
Subjt:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVF

Query:  ALKTWRHYLYG--EKVQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHPGKAN-----VEKLQDEMKRAGIDVVIKGGSVQ-IAQLTIQPT
        +LK WRHYL    E  ++ TDH++L    T +    N R  RW   ++D++ EI Y PG AN     + ++ DE +    D   +  S+  + Q++I   
Subjt:  ALKTWRHYLYG--EKVQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHPGKAN-----VEKLQDEMKRAGIDVVIKGGSVQ-IAQLTIQPT

Query:  LRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLL--WQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRC
         + + +    +D  L  + +    ++    +I L  GLL   ++++ +P D  + + I+ + H+   + HPG   +   + R + W G+++ I ++V  C
Subjt:  LRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLL--WQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRC

Query:  LTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTRFT
         TCQ  K+   +P G LQP+   +  W ++ MDFI+ LP++  G+N ++V+VDR +K A  +    +   ++ A+++ + ++   G P  I++D D  FT
Subjt:  LTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTRFT

Query:  SQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLMGP
        SQ W+         ++FS  + PQTDGQTER NQ +E +LR         W +H+ L++ +YNN+  +  QM PFE ++  R    +   E+ +      
Subjt:  SQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLMGP

Query:  ELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNL-EFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAV-HNVFHV
        E  Q T    Q +K+ + T   + K Y D++ + + EF+ GD V +K           K  KL+P F GPF +L + G   Y + LP ++  +  + FHV
Subjt:  ELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNL-EFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAV-HNVFHV

Query:  SMLRKIEY
        S L K  +
Subjt:  SMLRKIEY

Q9UR07 Transposon Tf2-11 polyprotein

1.6e-128

32.92

Show/hide

Query:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV
        +RM +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +RVR+GD  K AFR   G +E+LVM +G++ APA F   +N +  E  ++ V
Subjt:  MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFV

Query:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK
        + ++DNIL++SKSE +H  H++ VL  L+   L    +KCEF  S+V F+G+ +S KG T     I+ V++W QP    E+R FLG   Y R+F+   S+
Subjt:  IVFIDNILVYSKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSK

Query:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVF
        ++  L  L KK   + WTP   Q+ + +K+ LV+ PVL   D S  +++ +DAS   +G VL QK        + Y S ++ + + NY   D E+ A++ 
Subjt:  ISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVF

Query:  ALKTWRHYLYG--EKVQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHPGKAN-----VEKLQDEMKRAGIDVVIKGGSVQ-IAQLTIQPT
        +LK WRHYL    E  ++ TDH++L    T +    N R  RW   ++D++ EI Y PG AN     + ++ DE +    D   +  S+  + Q++I   
Subjt:  ALKTWRHYLYG--EKVQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHPGKAN-----VEKLQDEMKRAGIDVVIKGGSVQ-IAQLTIQPT

Query:  LRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLL--WQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRC
         + + +    +D  L  + +    ++    +I L  GLL   ++++ +P D  + + I+ + H+   + HPG   +   + R + W G+++ I ++V  C
Subjt:  LRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLL--WQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRC

Query:  LTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTRFT
         TCQ  K+   +P G LQP+   +  W ++ MDFI+ LP++  G+N ++V+VDR +K A  +    +   ++ A+++ + ++   G P  I++D D  FT
Subjt:  LTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTRFT

Query:  SQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLMGP
        SQ W+         ++FS  + PQTDGQTER NQ +E +LR         W +H+ L++ +YNN+  +  QM PFE ++  R    +   E+ +      
Subjt:  SQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLMGP

Query:  ELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNL-EFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAV-HNVFHV
        E  Q T    Q +K+ + T   + K Y D++ + + EF+ GD V +K           K  KL+P F GPF +L + G   Y + LP ++  +  + FHV
Subjt:  ELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNL-EFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAV-HNVFHV

Query:  SMLRKIEY
        S L K  +
Subjt:  SMLRKIEY

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

6.0e-27

46.4

Show/hide

Query:  HLRKVLTILRAQQLYAKFSKCEFWLSEVAFLG--HVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFAW
        HL  VL I    Q YA   KC F   ++A+LG  H++S +G++ DPAK+EA++ WP+P   TE+R FLGL GYYRRFV+++ KI   LT+L KK     W
Subjt:  HLRKVLTILRAQQLYAKFSKCEFWLSEVAFLG--HVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFAW

Query:  TPVCEQSFQELKKRLVTAPVLTVPD
        T +   +F+ LK  + T PVL +PD
Subjt:  TPVCEQSFQELKKRLVTAPVLTVPD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGGATGTGTATTGATTACAGAGAATTAAACAAGGTCACTATAAAGAATAAGTACCCTCTCCCGAGAATTGACGACCTGTTTGATCAGCTACAGGGAGCAACAGTTTT
CTCCAAAATTGACCTAAGGTCGGGGTATCATCAGTTGAGGGTTAGAGAAGGGGATATACTCAAGACAGCCTTCAGAAGTCGTTATGGGCATTACGAGTTTCTTGTTATGT
CTTTTGGCCTTACCAATGCACCAGCTATTTTCATGGAGCTAATGAACAGGGTGTTTAAGGAATTCTTAGACACCTTTGTCATAGTGTTCATCGACAACATTCTGGTATAC
TCTAAGTCAGAGGTAGATCATGAAATACACCTCAGAAAAGTCTTGACAATACTGAGAGCTCAGCAGTTGTATGCCAAGTTCTCCAAGTGTGAGTTTTGGTTGTCTGAAGT
TGCGTTTCTGGGTCACGTGGTGTCAAGCAAGGGGATCACAGTGGACCCAGCTAAGATAGAAGCAGTGATGAGGTGGCCACAGCCGACCACAGTCACAGAGGTGAGGAGTT
TTCTTGGGCTAGCTGGTTATTACAGAAGGTTTGTTCAGGATTTCTCCAAAATTTCCTCGGCGCTGACTCAGCTAACCAAGAAGGGCAAGCCCTTTGCTTGGACTCCAGTC
TGCGAACAAAGTTTCCAGGAACTCAAGAAGAGGTTGGTGACTGCACCAGTCCTTACAGTTCCAGACGGGTCAGGTAATCTCGTGGTGTACAGTGATGCATCAGGGAAAGG
CTTGGGGTGTGTGCTCATGCAGAAAGGTAAGGTGATAGCGTATGCTTCTCGACAATTGAAAGAATATGAACGAAACTACCCCACGCATGATCTCGAGTTAGCAGCGGTAG
TGTTTGCTCTAAAAACGTGGCGACACTACCTGTATGGGGAAAAAGTACAAGTCTTCACTGATCATAAGAGCCTCAAGTACTTATTCACGCAGAAGGAGCTCAATATGAGA
CAAAGGCGATGGTTGGAGCTGGTAAAGGATTATGACATAGAGATTCTGTACCATCCAGGCAAAGCCAACGTGGAAAAACTACAAGATGAGATGAAGAGGGCTGGGATAGA
CGTGGTGATTAAAGGTGGTAGTGTTCAGATAGCACAGTTAACTATACAGCCTACCCTACGAAAGAAATTTATCGACGCTCAGAGGTCTGATGAACACCTCAGTAAAGTGT
GGAGTCAGATTGAGACAGAGAGGCCAGCAGGGTATTCTATCTCCCTAGACGGGGGTCTGCTATGGCAAAACCGCCTCTGCGTTCCCCGAGACGAGGGAATCTTAAAAGAT
ATTATGACCGAAGCCCACGATACATCTTATGTGTTCCACCCTGGAAGTACAAAGATGTATCAGGATCTGAAGAGATTTTACTGGTGGTCTGGAATGAAGAGGGACATAGC
GGATTTCGTAAGCCGTTGCTTGACCTGCCAGCAGGTGAAGGCCCCGAGGCAGCGCCCAGCAGGATTGCTACAGCCCCTGAGCGTCCCTCAGTGGAAATGGGTAGCAGTCT
GTATGGATTTCATTTCGGGTTTGCCAAAGACAAAGCAGGGTTTCAACGTCATCTGGGTAATTGTGGACAGACTGACTAAGACAGCCCACTTCATTCTAGGAAAGTCCACA
TATCGAGTAGACCGGTGGGCTCAGTTATATATCAAGGAGATAGTACGCCTGCACGGGGTACCAGTGTCCATAGTATCAGACCGGGACACCAGGTTCACCTCTCAGTTCTG
GAGGAGTCTTCAGAAGGCACTAAGAACTCAGTTGAGGTTCAGTACAGCATTCCATCCTCAAACGGACGGACAGACCGAAAGGCTGAATCAGGTTTTAGAGGACATGTTGC
GAGCCTGCTCCTTAGATTTCGCTGGGTGTTGGGACGAACATCTGCCTTTAATGGAGTTTGCCTACAACAATAGTTATCAAGCGACCATTCAGATGGCCCCCTTCGAGGCA
CTGTATGGGCGTAGGTGTCGAACACCAGTGTTTTGGGAAGAGGTAGGCACGCAGCAGCTAATGGGACCAGAGTTGGTCCAGGTCACCAACGCAGCGGTGCAGAAAATCAA
ACAGAGGATACTCACCGCACAGAGTCGACAGAAAAGCTATGCAGATGTGCGTAGAAGGAACCTCGAATTTGAGGTGGGTGACCACGTGTTCCTGAAGGTGGCCCCTATGA
GGGGGGTGTGGAGGTTCGGGAAGGAAGGGAAATTGAGCCCAAGGTTCATAGGCCCCTTCGAGATTCTGGACAGAGTCGGGGCTGTGGCTTACAGAATTGCCCTACCACCG
AACCTTGCCGCCGTGCACAATGTGTTCCACGTATCCATGCTGCGAAAAATTGAGTATGCCGGGTTTCGGGTGTTTGATGGACGAATTCGCCCCATTGAGCGCGAACTTCG
TGCTCTGGGTGCTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDILKTAFRSRYGHYEFLVMSFGLTNAPAIFMELMNRVFKEFLDTFVIVFIDNILVY
SKSEVDHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFAWTPV
CEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKVQVFTDHKSLKYLFTQKELNMR
QRRWLELVKDYDIEILYHPGKANVEKLQDEMKRAGIDVVIKGGSVQIAQLTIQPTLRKKFIDAQRSDEHLSKVWSQIETERPAGYSISLDGGLLWQNRLCVPRDEGILKD
IMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRCLTCQQVKAPRQRPAGLLQPLSVPQWKWVAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFILGKST
YRVDRWAQLYIKEIVRLHGVPVSIVSDRDTRFTSQFWRSLQKALRTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEA
LYGRRCRTPVFWEEVGTQQLMGPELVQVTNAAVQKIKQRILTAQSRQKSYADVRRRNLEFEVGDHVFLKVAPMRGVWRFGKEGKLSPRFIGPFEILDRVGAVAYRIALPP
NLAAVHNVFHVSMLRKIEYAGFRVFDGRIRPIERELRALGA

CmoCh13G003440 (gene) of Cucurbita moschata (Rifu) v1 genome