; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh13G003710 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G003710
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionsecoisolariciresinol dehydrogenase-like
Genome locationCmo_Chr13:4730906..4732946
RNA-Seq ExpressionCmoCh13G003710
SyntenyCmoCh13G003710
Gene Ontology termsGO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR036291 - NAD(P)-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583702.1 hypothetical protein SDJN03_19634, partial [Cucurbita argyrosperma subsp. sororia]6.1e-3596.1Show/hide
Query:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQ
        +RVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILR EDIAEAALYLASDAS+FVSGHNLIVDGGFTSANQ
Subjt:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQ

XP_022927564.1 secoisolariciresinol dehydrogenase-like isoform X1 [Cucurbita moschata]6.1e-3596.1Show/hide
Query:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQ
        +RVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILR EDIAEAALYLASDAS+FVSGHNLIVDGGFTSANQ
Subjt:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQ

XP_022927565.1 secoisolariciresinol dehydrogenase-like isoform X2 [Cucurbita moschata]6.1e-3596.1Show/hide
Query:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQ
        +RVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILR EDIAEAALYLASDAS+FVSGHNLIVDGGFTSANQ
Subjt:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQ

XP_022927566.1 secoisolariciresinol dehydrogenase-like isoform X3 [Cucurbita moschata]6.1e-3596.1Show/hide
Query:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQ
        +RVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILR EDIAEAALYLASDAS+FVSGHNLIVDGGFTSANQ
Subjt:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQ

XP_022973162.1 secoisolariciresinol dehydrogenase-like [Cucurbita maxima]1.6e-3597.4Show/hide
Query:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQ
        +RVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDAS+FVSGHNLIVDGGFTSANQ
Subjt:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQ

TrEMBL top hitse value%identityAlignment
A0A6J1EI14 secoisolariciresinol dehydrogenase-like isoform X32.9e-3596.1Show/hide
Query:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQ
        +RVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILR EDIAEAALYLASDAS+FVSGHNLIVDGGFTSANQ
Subjt:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQ

A0A6J1EID0 secoisolariciresinol dehydrogenase-like isoform X12.9e-3596.1Show/hide
Query:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQ
        +RVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILR EDIAEAALYLASDAS+FVSGHNLIVDGGFTSANQ
Subjt:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQ

A0A6J1ELC4 secoisolariciresinol dehydrogenase-like5.5e-3492.21Show/hide
Query:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQ
        +RVNCVSPHVVPS +TR+LFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDAS+FVSGHNLIVDGGFT+ANQ
Subjt:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQ

A0A6J1EPB9 secoisolariciresinol dehydrogenase-like isoform X22.9e-3596.1Show/hide
Query:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQ
        +RVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILR EDIAEAALYLASDAS+FVSGHNLIVDGGFTSANQ
Subjt:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQ

A0A6J1I6S5 secoisolariciresinol dehydrogenase-like7.7e-3697.4Show/hide
Query:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQ
        +RVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDAS+FVSGHNLIVDGGFTSANQ
Subjt:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQ

SwissProt top hitse value%identityAlignment
A3F5F0 Secoisolariciresinol dehydrogenase1.8e-1348.72Show/hide
Query:  MRVNCVSPHVVPSQMTRDLFKLEDG--DEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSAN
        +RVNCVSP+VV S +  D+F ++    +E  +  ++ K G +LRAED+A+A  YLA D SK+VSG NL++DGG+T  N
Subjt:  MRVNCVSPHVVPSQMTRDLFKLEDG--DEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSAN

F1SWA0 Zerumbone synthase1.2e-0940.48Show/hide
Query:  MRVNCVSPHVVPSQMTRDLFKLEDGDE--------FPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSAN
        +RVNCVSP+ VP++++       +  E        F    ++ K  D++   D+AEA LYLA++ SK+VSG NL++DGGF+ AN
Subjt:  MRVNCVSPHVVPSQMTRDLFKLEDGDE--------FPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSAN

Q94KL7 Secoisolariciresinol dehydrogenase (Fragment)6.8e-1345Show/hide
Query:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNV--YSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQV
        +RVNC+SP  +P+ + +    +++ +EF NV  ++    G     ED+A AALYLASD +K+VSGHNL +DGGF+  N V
Subjt:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNV--YSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQV

Q94KL8 Secoisolariciresinol dehydrogenase (Fragment)1.4e-1347.44Show/hide
Query:  MRVNCVSPHVVPSQMTRDLFKLEDG--DEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSAN
        +RVNCVSP++V S +  D+F ++    +E  +  ++ K G +LRAED+A+A  YLA D SK+VSG NL++DGG+T  N
Subjt:  MRVNCVSPHVVPSQMTRDLFKLEDG--DEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSAN

Q9SCU0 Short-chain dehydrogenase reductase 2a4.0e-1347.67Show/hide
Query:  MRVNCVSPHVVPSQMTRDLFK-----------LEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSA
        +RVNC+SP  V + M  + ++           +E+ +EF    ++ K G+ LRA DIAEAALYLASD SK+V+GHNL+VDGG T+A
Subjt:  MRVNCVSPHVVPSQMTRDLFK-----------LEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSA

Arabidopsis top hitse value%identityAlignment
AT1G52340.1 NAD(P)-binding Rossmann-fold superfamily protein1.6e-0937.65Show/hide
Query:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFK---------CGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSAN
        +RVNCVSP+ V +++   L  L + +   + +  F+          G  L  +D+A A L+LASD S+++SG NL++DGGFT  N
Subjt:  MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFK---------CGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSAN

AT2G47140.1 NAD(P)-binding Rossmann-fold superfamily protein6.1e-0942.67Show/hide
Query:  MRVNCVSPHVVPSQMTRDLFKLEDG--DEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFT
        +RVN V+P  V + +  + FK+E    ++  +  ++ K G +L+A  +AEAAL+LASD S +VSG NL VDGG++
Subjt:  MRVNCVSPHVVPSQMTRDLFKLEDG--DEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFT

AT3G26760.1 NAD(P)-binding Rossmann-fold superfamily protein3.8e-1142.68Show/hide
Query:  MRVNCVSPHVVPSQMTRDLF---------KLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFT
        +R+NC+SP  +P+ +T  +F         + E      N     K G+     D+A+AALYLASD +KFV+GHNL+VDGGFT
Subjt:  MRVNCVSPHVVPSQMTRDLF---------KLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFT

AT3G51680.1 NAD(P)-binding Rossmann-fold superfamily protein2.8e-1447.67Show/hide
Query:  MRVNCVSPHVVPSQMTRDLFK-----------LEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSA
        +RVNC+SP  V + M  + ++           +E+ +EF    ++ K G+ LRA DIAEAALYLASD SK+V+GHNL+VDGG T+A
Subjt:  MRVNCVSPHVVPSQMTRDLFK-----------LEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSA

AT4G03140.1 NAD(P)-binding Rossmann-fold superfamily protein1.1e-1041.25Show/hide
Query:  MRVNCVSPHVVPSQMTRDLFK-----LEDGDEFPNVYS-HFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTS
        +RVNC+SP  + +    D  +     ++D      V S     G++    D+A AA+YLASD SK+V+GHNL+VDGGFT+
Subjt:  MRVNCVSPHVVPSQMTRDLFK-----LEDGDEFPNVYS-HFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGTTAATTGCGTGTCGCCCCATGTAGTGCCCTCGCAGATGACTAGGGATCTATTTAAGCTTGAAGATGGCGATGAGTTTCCTAATGTTTATTCGCATTTCAAATG
TGGAGATATTTTAAGGGCCGAAGATATAGCTGAAGCTGCTTTGTATTTAGCAAGTGATGCATCGAAATTTGTGAGTGGACATAACTTAATTGTTGATGGAGGCTTCACTT
CAGCAAACCAAGTTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGTTAATTGCGTGTCGCCCCATGTAGTGCCCTCGCAGATGACTAGGGATCTATTTAAGCTTGAAGATGGCGATGAGTTTCCTAATGTTTATTCGCATTTCAAATG
TGGAGATATTTTAAGGGCCGAAGATATAGCTGAAGCTGCTTTGTATTTAGCAAGTGATGCATCGAAATTTGTGAGTGGACATAACTTAATTGTTGATGGAGGCTTCACTT
CAGCAAACCAAGTTCATTGA
Protein sequenceShow/hide protein sequence
MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQVH