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CmoCh13G003940 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G003940
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr13:4962294..4966346
RNA-Seq ExpressionCmoCh13G003940
SyntenyCmoCh13G003940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019367.1 hypothetical protein SDJN02_18327 [Cucurbita argyrosperma subsp. argyrosperma]3.0e-7667.34Show/hide
Query:  MGPLFDSVMQSWNFLKIS--------------------------------VVLQHNLGSLHLLLLHHEFRFQLGNHLERQRSFRPRVQLWRQREAKRTLE
        MGPLFDSVMQSWNFLKIS                                VVLQHNLGSLHLL LHHEF FQLGNHLER+RSFRPRVQLWRQREAKR LE
Subjt:  MGPLFDSVMQSWNFLKIS--------------------------------VVLQHNLGSLHLLLLHHEFRFQLGNHLERQRSFRPRVQLWRQREAKRTLE

Query:  TMSEPLKLLLQQRGGDRGVNESKRQGTTGNVGTRMLDQIAVCLLDWSVALSLQRITTIFTFLAPAPSEYTIFEETRSFSSSFRHGTTSRTSPTWRLVLVE
        TM+EPLKLLLQ                                      L+   +TTIFTFLAPAPSEYTIFEETRSFSSSFRHGTTSRTSPTWRLVLVE
Subjt:  TMSEPLKLLLQQRGGDRGVNESKRQGTTGNVGTRMLDQIAVCLLDWSVALSLQRITTIFTFLAPAPSEYTIFEETRSFSSSFRHGTTSRTSPTWRLVLVE

Query:  EEKSWRRRSLQHSVAESTVVAKSVAFSIPRSFFCGDRTQGKTMQFPIC
        EEKSWRR SLQHSVAESTVVAKSVAFSIPRSFFCGDRTQGKTMQFPIC
Subjt:  EEKSWRRRSLQHSVAESTVVAKSVAFSIPRSFFCGDRTQGKTMQFPIC
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCCCCTGTTCGATTCTGTAATGCAATCATGGAATTTCTTGAAGATTAGTGTCGTCCTGCAACATAATCTAGGATCCCTTCACCTGCTGCTCTTACACCATGAATT
TCGGTTCCAACTTGGAAACCACCTGGAAAGGCAGCGATCATTCCGACCAAGAGTGCAGCTGTGGAGGCAAAGAGAAGCCAAAAGAACGCTAGAAACAATGTCAGAACCAC
TGAAACTGCTGCTACAACAGAGAGGGGGAGACAGAGGGGTTAATGAGTCAAAAAGACAGGGAACAACTGGAAACGTGGGGACAAGGATGCTTGATCAGATTGCTGTCTGT
TTGCTTGATTGGTCGGTTGCCTTGTCCCTTCAGAGAATTACCACAATCTTCACCTTCCTCGCTCCCGCTCCATCCGAGTACACTATCTTCGAGGAAACCAGAAGCTTTTC
GAGCTCTTTCAGGCATGGAACAACATCTCGAACCTCCCCAACTTGGAGGCTGGTTCTTGTTGAAGAAGAAAAATCATGGAGAAGACGGTCATTACAGCATTCGGTGGCAG
AATCGACCGTTGTAGCCAAATCAGTGGCTTTTTCGATACCTCGGAGCTTCTTCTGTGGCGACCGAACACAAGGCAAGACAATGCAGTTTCCCATTTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCCCCTGTTCGATTCTGTAATGCAATCATGGAATTTCTTGAAGATTAGTGTCGTCCTGCAACATAATCTAGGATCCCTTCACCTGCTGCTCTTACACCATGAATT
TCGGTTCCAACTTGGAAACCACCTGGAAAGGCAGCGATCATTCCGACCAAGAGTGCAGCTGTGGAGGCAAAGAGAAGCCAAAAGAACGCTAGAAACAATGTCAGAACCAC
TGAAACTGCTGCTACAACAGAGAGGGGGAGACAGAGGGGTTAATGAGTCAAAAAGACAGGGAACAACTGGAAACGTGGGGACAAGGATGCTTGATCAGATTGCTGTCTGT
TTGCTTGATTGGTCGGTTGCCTTGTCCCTTCAGAGAATTACCACAATCTTCACCTTCCTCGCTCCCGCTCCATCCGAGTACACTATCTTCGAGGAAACCAGAAGCTTTTC
GAGCTCTTTCAGGCATGGAACAACATCTCGAACCTCCCCAACTTGGAGGCTGGTTCTTGTTGAAGAAGAAAAATCATGGAGAAGACGGTCATTACAGCATTCGGTGGCAG
AATCGACCGTTGTAGCCAAATCAGTGGCTTTTTCGATACCTCGGAGCTTCTTCTGTGGCGACCGAACACAAGGCAAGACAATGCAGTTTCCCATTTGTTAA
Protein sequenceShow/hide protein sequence
MGPLFDSVMQSWNFLKISVVLQHNLGSLHLLLLHHEFRFQLGNHLERQRSFRPRVQLWRQREAKRTLETMSEPLKLLLQQRGGDRGVNESKRQGTTGNVGTRMLDQIAVC
LLDWSVALSLQRITTIFTFLAPAPSEYTIFEETRSFSSSFRHGTTSRTSPTWRLVLVEEEKSWRRRSLQHSVAESTVVAKSVAFSIPRSFFCGDRTQGKTMQFPIC