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CmoCh13G004600 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G004600
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCOX assembly mitochondrial protein
Genome locationCmo_Chr13:5647131..5648273
RNA-Seq ExpressionCmoCh13G004600
SyntenyCmoCh13G004600
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653663.1 hypothetical protein Csa_007602 [Cucumis sativus]1.1e-1477.78Show/hide
Query:  MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVATA
        MLP G++P+ GDGG +RLEQALRE H R+PEGPARRSACR+LNRSLAEC+VATA
Subjt:  MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVATA

KAG7019417.1 hypothetical protein SDJN02_18378, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-23100Show/hide
Query:  MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVATAW
        MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVATAW
Subjt:  MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVATAW

XP_004145445.1 uncharacterized protein LOC101219184 [Cucumis sativus]1.1e-1477.78Show/hide
Query:  MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVATA
        MLP G++P+ GDGG +RLEQALRE H R+PEGPARRSACR+LNRSLAEC+VATA
Subjt:  MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVATA

XP_023542217.1 uncharacterized protein LOC111802182 [Cucurbita pepo subsp. pepo]3.3e-1479.25Show/hide
Query:  MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVAT
        M+PTGKAPI GDGG ERLEQALR+ H RLPEGPARRS C +LNRS AEC+VAT
Subjt:  MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVAT

XP_038893663.1 uncharacterized protein LOC120082530 [Benincasa hispida]3.9e-1585.19Show/hide
Query:  MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVATA
        MLPTG A I GDGG ERLEQALRE H RLPEGPARRSACR+LNRSLAEC+VATA
Subjt:  MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVATA

TrEMBL top hitse value%identityAlignment
A0A0A0LYC1 Uncharacterized protein5.5e-1577.78Show/hide
Query:  MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVATA
        MLP G++P+ GDGG +RLEQALRE H R+PEGPARRSACR+LNRSLAEC+VATA
Subjt:  MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVATA

A0A1S3C8S8 uncharacterized protein LOC1034982673.5e-1477.78Show/hide
Query:  MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVATA
        MLP G++P+ GD G ERLEQALRE H R+PEGPARRSACR+LNRSLAEC+VATA
Subjt:  MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVATA

A0A5D3CLT3 Uncharacterized protein3.5e-1477.78Show/hide
Query:  MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVATA
        MLP G++P+ GD G ERLEQALRE H R+PEGPARRSACR+LNRSLAEC+VATA
Subjt:  MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVATA

A0A6J1GSM0 uncharacterized protein LOC1114571192.1e-1479.25Show/hide
Query:  MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVAT
        M+PTGKAPI GDGG ERLEQALR+ H RLPEGPARRS C +LNRS AEC+VAT
Subjt:  MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVAT

A0A6J1K2P5 uncharacterized protein LOC1114905072.1e-1479.25Show/hide
Query:  MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVAT
        M+PTGKAPI GDGG ERLEQALR+ H RLPEGPARRS C +LNRS AEC+VAT
Subjt:  MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVAT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G31175.1 unknown protein7.6e-0966.67Show/hide
Query:  ERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVATA
        +RLE+AL + H R+PEGPARRS CR+LN++ AECVVA A
Subjt:  ERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVATA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACCAACCGGCAAAGCTCCGATCGACGGTGACGGCGGCTACGAGCGGTTAGAGCAGGCTCTCCGAGAGAACCACAACCGATTGCCAGAAGGTCCGGCGCGGCGCTC
GGCCTGCCGAAACCTGAACCGATCTCTTGCAGAGTGCGTGGTGGCGACGGCTTGGTTTGTTTTGGTCTCAATTCTAACTTCGGACCACTGTTGTACTGTTTTGCAGGTCA
TTTTTTTAACGTTTAAAGAGGGTGTTGCTTCTAAAAAGAATAGAGTCAAAGATGTGAAGAAGAAACAAGTGCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTACCAACCGGCAAAGCTCCGATCGACGGTGACGGCGGCTACGAGCGGTTAGAGCAGGCTCTCCGAGAGAACCACAACCGATTGCCAGAAGGTCCGGCGCGGCGCTC
GGCCTGCCGAAACCTGAACCGATCTCTTGCAGAGTGCGTGGTGGCGACGGCTTGGTTTGTTTTGGTCTCAATTCTAACTTCGGACCACTGTTGTACTGTTTTGCAGGTCA
TTTTTTTAACGTTTAAAGAGGGTGTTGCTTCTAAAAAGAATAGAGTCAAAGATGTGAAGAAGAAACAAGTGCACTAA
Protein sequenceShow/hide protein sequence
MLPTGKAPIDGDGGYERLEQALRENHNRLPEGPARRSACRNLNRSLAECVVATAWFVLVSILTSDHCCTVLQVIFLTFKEGVASKKNRVKDVKKKQVH