; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh13G004680 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G004680
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionvesicle-associated membrane protein 722-like
Genome locationCmo_Chr13:5731446..5732630
RNA-Seq ExpressionCmoCh13G004680
SyntenyCmoCh13G004680
Gene Ontology termsGO:0016192 - vesicle-mediated transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
InterPro domainsIPR001388 - Synaptobrevin
IPR042855 - v-SNARE, coiled-coil homology domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYI04909.1 hypothetical protein ES332_A10G052200v1 [Gossypium tomentosum]1.9e-2794.44Show/hide
Query:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGKK
        +VLDRGEKIELLVDKTENLHNQAQDF+S+GTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVC GFNCGKK
Subjt:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGKK

XP_008459063.1 PREDICTED: vesicle-associated membrane protein 722-like [Cucumis melo]1.5e-2795.83Show/hide
Query:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGKK
        +VLDRGEKIELLVDKTENLHNQAQDFK+SGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCG K
Subjt:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGKK

XP_022142496.1 vesicle-associated membrane protein 722-like [Momordica charantia]5.1e-2898.59Show/hide
Query:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGK
        +VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGK
Subjt:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGK

XP_022927314.1 vesicle-associated membrane protein 722-like [Cucurbita moschata]1.0e-2898.61Show/hide
Query:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGKK
        +VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGKK
Subjt:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGKK

XP_038894077.1 vesicle-associated membrane protein 722-like [Benincasa hispida]6.6e-2897.22Show/hide
Query:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGKK
        +VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCG K
Subjt:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGKK

TrEMBL top hitse value%identityAlignment
A0A0A0M197 V-SNARE coiled-coil homology domain-containing protein3.2e-2895.89Show/hide
Query:  MQVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGKK
        MQVLDRGEKIELLVDKTENLH QAQDFK+SGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCG K
Subjt:  MQVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGKK

A0A1S3CAJ0 vesicle-associated membrane protein 722-like7.2e-2895.83Show/hide
Query:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGKK
        +VLDRGEKIELLVDKTENLHNQAQDFK+SGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCG K
Subjt:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGKK

A0A6J1CMC8 vesicle-associated membrane protein 722-like2.5e-2898.59Show/hide
Query:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGK
        +VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGK
Subjt:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGK

A0A6J1EHP2 vesicle-associated membrane protein 722-like5.0e-2998.61Show/hide
Query:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGKK
        +VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGKK
Subjt:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGKK

A0A6J1KR02 vesicle-associated membrane protein 722-like5.0e-2998.61Show/hide
Query:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGKK
        +VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGKK
Subjt:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGKK

SwissProt top hitse value%identityAlignment
O23429 Vesicle-associated membrane protein 7244.5e-1963.77Show/hide
Query:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNC
        + +DRGE + +L DKTENL +QAQ++K  GT++RRK+W QNMKIKL+VLGIL+ L+LII +SVC GFNC
Subjt:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNC

O48850 Vesicle-associated membrane protein 7251.0e-2381.16Show/hide
Query:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNC
        +VLDRGEKIELLVDKTENL +QAQDF++ GTKIRRKMW +NMKIKLIVLGI+I LILII+LSVC GF C
Subjt:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNC

P47192 Vesicle-associated membrane protein 7225.5e-2580.28Show/hide
Query:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGK
        +VLDRGEKIELLVDKTENL +QAQDF++ GT++RRKMW QNMKIKLIVL I+IALILII+LS+C GFNCGK
Subjt:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGK

Q9MAS5 Putative vesicle-associated membrane protein 7268.7e-2375.36Show/hide
Query:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNC
        +VLDRGEKIELLVDKTENL +QAQDF++ GTK++RK+W +NMKIKLIV GI++ALILII+LSVC GF C
Subjt:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNC

Q9ZTW3 Vesicle-associated membrane protein 7216.0e-2482.61Show/hide
Query:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNC
        +VLDRGEKIELLVDKTENL +QAQDF+++GT++RRKMWLQNMKIKLIVL I+IALILIIVLSVC GF C
Subjt:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNC

Arabidopsis top hitse value%identityAlignment
AT1G04750.1 vesicle-associated membrane protein 7214.3e-2582.61Show/hide
Query:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNC
        +VLDRGEKIELLVDKTENL +QAQDF+++GT++RRKMWLQNMKIKLIVL I+IALILIIVLSVC GF C
Subjt:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNC

AT1G04750.2 vesicle-associated membrane protein 7214.3e-2582.61Show/hide
Query:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNC
        +VLDRGEKIELLVDKTENL +QAQDF+++GT++RRKMWLQNMKIKLIVL I+IALILIIVLSVC GF C
Subjt:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNC

AT2G33120.1 synaptobrevin-related protein 13.9e-2680.28Show/hide
Query:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGK
        +VLDRGEKIELLVDKTENL +QAQDF++ GT++RRKMW QNMKIKLIVL I+IALILII+LS+C GFNCGK
Subjt:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGK

AT2G33120.2 synaptobrevin-related protein 13.9e-2680.28Show/hide
Query:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGK
        +VLDRGEKIELLVDKTENL +QAQDF++ GT++RRKMW QNMKIKLIVL I+IALILII+LS+C GFNCGK
Subjt:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGK

AT2G33120.3 synaptobrevin-related protein 13.9e-2680.28Show/hide
Query:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGK
        +VLDRGEKIELLVDKTENL +QAQDF++ GT++RRKMW QNMKIKLIVL I+IALILII+LS+C GFNCGK
Subjt:  QVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGTTCTTGATAGAGGGGAGAAGATAGAACTTCTAGTGGATAAAACAGAAAACCTTCATAACCAGGCGCAAGACTTCAAGAGCAGTGGAACAAAAATTCGAAGGAA
AATGTGGCTACAAAATATGAAGATCAAGTTGATCGTTTTGGGGATTTTGATAGCGTTGATCCTCATCATAGTCCTTTCAGTGTGCCGTGGATTCAACTGTGGTAAAAAAT
GA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGTTCTTGATAGAGGGGAGAAGATAGAACTTCTAGTGGATAAAACAGAAAACCTTCATAACCAGGCGCAAGACTTCAAGAGCAGTGGAACAAAAATTCGAAGGAA
AATGTGGCTACAAAATATGAAGATCAAGTTGATCGTTTTGGGGATTTTGATAGCGTTGATCCTCATCATAGTCCTTTCAGTGTGCCGTGGATTCAACTGTGGTAAAAAAT
GAACACTTTCTCAAGGACAAACCTCACACTAAAATCTTTTGGCATCATGATGTTTTGAGAGAGAAGTAATATACATGATTTGGCTTTGGCTGTGGCTATGTATGTAGTAA
ACGTAACACCACGAAGTGCAGAATATCTCTTTTCTTGAAAGCAAAATTTACGTGTGAATGATATTCGTTACCTTTTCTTTTTCGTTGAAGACAACATAACATGTGGGTTG
GATTTTCAGAATTGGAGATCAAAATTTGCTTTTCTGGTTTTATGTTATATTCTTCCTTCCTTCTTGGGGCGTTTTGGGGTTCATGGGGAATGTGGAAGGTGTTGCATGTA
TGATGTTCTTAAGGGTCTTTGTTATCCCTCAAATTGTTTGTTGCCCGGTTGAGTATAATTGTCAAATTGTAGTTGAGCTTCGGTGATGTCCAGATCCAGATTCAAACATG
GACCGGAGAATAGATAATCATTTAGATACCCCTTTGTGCAATACATACAGGAGCATTTTGTTTCCTTTAGGTGTTGTCTACTAAGCTCCTTCTTTT
Protein sequenceShow/hide protein sequence
MQVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNCGKK