; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh13G004950 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G004950
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like
Genome locationCmo_Chr13:5917136..5917678
RNA-Seq ExpressionCmoCh13G004950
SyntenyCmoCh13G004950
Gene Ontology termsGO:0009299 - mRNA transcription (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR006936 - ALOG domain
IPR040222 - ALOG family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583821.1 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6, partial [Cucurbita argyrosperma subsp. sororia]1.1e-9299.44Show/hide
Query:  MSAAVAAAAAAAALARRSSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFG
        MSAAV AAAAAAALARRSSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFG
Subjt:  MSAAVAAAAAAAALARRSSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFG

Query:  DTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR
        DTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR
Subjt:  DTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR

KAG7019447.1 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-9299.44Show/hide
Query:  MSAAVAAAAAAAALARRSSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFG
        MSAAV AAAAAAALARRSSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFG
Subjt:  MSAAVAAAAAAAALARRSSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFG

Query:  DTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR
        DTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR
Subjt:  DTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR

XP_022927089.1 protein G1-like6 [Cucurbita moschata]2.6e-94100Show/hide
Query:  MSAAVAAAAAAAALARRSSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFG
        MSAAVAAAAAAAALARRSSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFG
Subjt:  MSAAVAAAAAAAALARRSSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFG

Query:  DTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR
        DTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR
Subjt:  DTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR

XP_023001367.1 protein G1-like6 [Cucurbita maxima]9.4e-9298.34Show/hide
Query:  MSAAVAAAAAAAALARR-SSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEF
        MSAAVAAAAAAAALARR SSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSL+TCTGADIVEFLCYLDEF
Subjt:  MSAAVAAAAAAAALARR-SSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEF

Query:  GDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR
        GDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLD IKDSQNRSRGIDR
Subjt:  GDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR

XP_023519738.1 protein G1-like6 [Cucurbita pepo subsp. pepo]1.9e-9298.9Show/hide
Query:  MSAAVAAAAAAAALARR-SSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEF
        MSAAVAAAAAAAALARR SSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEF
Subjt:  MSAAVAAAAAAAALARR-SSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEF

Query:  GDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR
        GDTKVH DTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR
Subjt:  GDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR

TrEMBL top hitse value%identityAlignment
A0A0A0LY69 ALOG domain-containing protein6.6e-6774.44Show/hide
Query:  MSAAVAAAAAAAALARRSSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFG
        MSAAV AAAAAAAL+RR+SSSSSSSTT  RSSS SFYS YYPS SVSVR  PL SRY+C KR DW++FRQYLRSR PTLSL+ C+G+++VEFL YLD  G
Subjt:  MSAAVAAAAAAAALARRSSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFG

Query:  DTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR
         +K+H  TCP+FGHRYPVDPYCDCPTQQPW ++  LI RLRVAFEENGGNPVTNPFN V VK+YL+ +KDSQ  SRGIDR
Subjt:  DTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR

A0A1S3C9J9 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like1.4e-6976.11Show/hide
Query:  MSAAVAAAAAAAALARRSSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFG
        MSAAV AAAAAAAL RR+SS      TS  SSS SFYS YYPS SVSVR PPL SRYEC KR DW++FRQYLRSRCPTLSL+ C+GA++VEFLCYLDE G
Subjt:  MSAAVAAAAAAAALARRSSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFG

Query:  DTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR
         +K+H  TCPNFG RYPVDPYCDCPTQQPW ++  LI RLRVAFEENGGNPVTNPFN VDVK+YL+D+KDSQ RSRGIDR
Subjt:  DTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR

A0A5D3E452 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like1.4e-6976.11Show/hide
Query:  MSAAVAAAAAAAALARRSSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFG
        MSAAV AAAAAAAL RR+SS      TS  SSS SFYS YYPS SVSVR PPL SRYEC KR DW++FRQYLRSRCPTLSL+ C+GA++VEFLCYLDE G
Subjt:  MSAAVAAAAAAAALARRSSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFG

Query:  DTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR
         +K+H  TCPNFG RYPVDPYCDCPTQQPW ++  LI RLRVAFEENGGNPVTNPFN VDVK+YL+D+KDSQ RSRGIDR
Subjt:  DTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR

A0A6J1EH11 protein G1-like61.3e-94100Show/hide
Query:  MSAAVAAAAAAAALARRSSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFG
        MSAAVAAAAAAAALARRSSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFG
Subjt:  MSAAVAAAAAAAALARRSSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFG

Query:  DTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR
        DTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR
Subjt:  DTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR

A0A6J1KGB9 protein G1-like64.6e-9298.34Show/hide
Query:  MSAAVAAAAAAAALARR-SSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEF
        MSAAVAAAAAAAALARR SSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSL+TCTGADIVEFLCYLDEF
Subjt:  MSAAVAAAAAAAALARR-SSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEF

Query:  GDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR
        GDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLD IKDSQNRSRGIDR
Subjt:  GDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR

SwissProt top hitse value%identityAlignment
A2YG32 Protein G1-like22.6e-3655.04Show/hide
Query:  QPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFGDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGG
        + P  SRYE +KR DW  F QYLR+  P L LS C+GA ++EFL YLD+FG TKVHA  CP FGH  P  P C CP +Q W S+  L+ RLR AFEE+GG
Subjt:  QPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFGDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGG

Query:  NPVTNPFNAVDVKIYLDDIKDSQNRSRGI
         P  NPF A  V++YL +++DSQ ++RGI
Subjt:  NPVTNPFNAVDVKIYLDDIKDSQNRSRGI

B8AIK3 Protein G1-like11.2e-3657.26Show/hide
Query:  SRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFGDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTN
        SRYE +KR DW  F QYLR+  P L LS C+GA ++EFL YLD+FG TKVHA  CP FGH  P  P C CP +Q W S+  L+ RLR AFEE+GG P +N
Subjt:  SRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFGDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTN

Query:  PFNAVDVKIYLDDIKDSQNRSRGI
        PF A  V++YL DI+D+Q+++RGI
Subjt:  PFNAVDVKIYLDDIKDSQNRSRGI

Q0E3M2 Protein G1-like11.2e-3657.26Show/hide
Query:  SRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFGDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTN
        SRYE +KR DW  F QYLR+  P L LS C+GA ++EFL YLD+FG TKVHA  CP FGH  P  P C CP +Q W S+  L+ RLR AFEE+GG P +N
Subjt:  SRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFGDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTN

Query:  PFNAVDVKIYLDDIKDSQNRSRGI
        PF A  V++YL DI+D+Q+++RGI
Subjt:  PFNAVDVKIYLDDIKDSQNRSRGI

Q652I1 Protein G1-like22.6e-3655.04Show/hide
Query:  QPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFGDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGG
        + P  SRYE +KR DW  F QYLR+  P L LS C+GA ++EFL YLD+FG TKVHA  CP FGH  P  P C CP +Q W S+  L+ RLR AFEE+GG
Subjt:  QPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFGDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGG

Query:  NPVTNPFNAVDVKIYLDDIKDSQNRSRGI
         P  NPF A  V++YL +++DSQ ++RGI
Subjt:  NPVTNPFNAVDVKIYLDDIKDSQNRSRGI

Q9LMK2 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 64.8e-3853.28Show/hide
Query:  PSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFGDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLR
        P PS     P   SRYE +KR DW+ F QYL++  P L+LS C+GA ++EFL YLD+FG TKVH   CP FGH+ P  P C CP +Q W S+  LI RLR
Subjt:  PSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFGDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLR

Query:  VAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGI
         A+EENGG P +NPF A  V+IYL ++++SQ ++RGI
Subjt:  VAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGI

Arabidopsis top hitse value%identityAlignment
AT1G07090.1 Protein of unknown function (DUF640)3.4e-3953.28Show/hide
Query:  PSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFGDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLR
        P PS     P   SRYE +KR DW+ F QYL++  P L+LS C+GA ++EFL YLD+FG TKVH   CP FGH+ P  P C CP +Q W S+  LI RLR
Subjt:  PSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFGDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLR

Query:  VAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGI
         A+EENGG P +NPF A  V+IYL ++++SQ ++RGI
Subjt:  VAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGI

AT2G31160.1 Protein of unknown function (DUF640)3.0e-3548.43Show/hide
Query:  SSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFGDTKVHADTCPNFGHRYPVD
        S++SSS T       +       SPS +      +SRYE +KR DW+ F QYLR+  P LSLS C+GA ++EFL YLD+FG TKVH + C  +GH  P  
Subjt:  SSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFGDTKVHADTCPNFGHRYPVD

Query:  PYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGI
        P C CP +Q W S+  LI RLR AFEENGG P TNPF A  V++YL +++D Q+++RG+
Subjt:  PYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGI

AT3G04510.1 Protein of unknown function (DUF640)1.9e-3448.39Show/hide
Query:  SSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFGDTKVHADTCPNFGHRYPVDPYCD
        S   +NR+ + S  +Q   +PS S   PP +SRYE +KR DW+ F QYLR+  P LSL++C+GA +++FL YLD+FG TKVH   C  FG   P  P C 
Subjt:  SSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFGDTKVHADTCPNFGHRYPVDPYCD

Query:  CPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGI
        CP +Q W S+  LI RLR A+EENGG P T+PF +  V+I+L +++D Q +SRG+
Subjt:  CPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGI

AT3G23290.2 Protein of unknown function (DUF640)9.2e-3752.07Show/hide
Query:  AAAALARRSSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFGDTKVHADTC
        AAAA    +SSSSSS      SS GS  +Q               SRYE +KR DW+ F QYLR+  P LSLS C+GA ++EFL YLD+FG TKVH   C
Subjt:  AAAALARRSSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFGDTKVHADTC

Query:  PNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGI
        P FGH  P  P C CP +Q W S+  LI RLR AFEENGG+P TNPF A  V++YL +++DSQ ++RGI
Subjt:  PNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGI

AT5G28490.1 Protein of unknown function (DUF640)1.9e-3451.56Show/hide
Query:  PPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFGDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGN
        PP +SRYE +KR DW+ F QYLR+  P LSL +C+GA ++EFL YLD+FG TKVH   C  FG   P  P C CP +Q W S+  LI RLR A+EENGG 
Subjt:  PPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFGDTKVHADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGN

Query:  PVTNPFNAVDVKIYLDDIKDSQNRSRGI
        P  NPF +  V+++L +++D Q ++RG+
Subjt:  PVTNPFNAVDVKIYLDDIKDSQNRSRGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGCCGCCGTAGCAGCCGCCGCCGCCGCCGCTGCCCTAGCCCGACGGAGCTCCTCCTCTTCCTCCTCGTCCACTACCTCCAACCGATCCTCCTCCGGCTCT
TTCTACAGTCAATACTACCCGTCGCCCTCTGTATCGGTCCGACAGCCGCCATTGGCCAGCCGGTATGAGTGCCGGAAACGGCTAGACTGGAGTAAATTCCGGCAG
TATCTGAGAAGTCGGTGCCCGACATTGAGCCTCTCCACCTGCACCGGAGCGGATATTGTCGAGTTCCTCTGCTATTTAGACGAATTCGGCGACACCAAAGTACAC
GCCGACACCTGCCCTAATTTCGGCCACCGCTACCCGGTCGATCCCTACTGCGATTGCCCCACCCAACAACCGTGGAACAGCGTCGCCGGTCTCATCAGCCGCCTC
CGCGTCGCCTTCGAGGAAAACGGCGGCAACCCAGTCACCAACCCCTTTAATGCCGTCGACGTCAAAATTTACCTCGACGACATTAAGGACTCCCAAAACAGATCC
CGAGGAATTGATCGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGCCGCCGTAGCAGCCGCCGCCGCCGCCGCTGCCCTAGCCCGACGGAGCTCCTCCTCTTCCTCCTCGTCCACTACCTCCAACCGATCCTCCTCCGGCTCT
TTCTACAGTCAATACTACCCGTCGCCCTCTGTATCGGTCCGACAGCCGCCATTGGCCAGCCGGTATGAGTGCCGGAAACGGCTAGACTGGAGTAAATTCCGGCAG
TATCTGAGAAGTCGGTGCCCGACATTGAGCCTCTCCACCTGCACCGGAGCGGATATTGTCGAGTTCCTCTGCTATTTAGACGAATTCGGCGACACCAAAGTACAC
GCCGACACCTGCCCTAATTTCGGCCACCGCTACCCGGTCGATCCCTACTGCGATTGCCCCACCCAACAACCGTGGAACAGCGTCGCCGGTCTCATCAGCCGCCTC
CGCGTCGCCTTCGAGGAAAACGGCGGCAACCCAGTCACCAACCCCTTTAATGCCGTCGACGTCAAAATTTACCTCGACGACATTAAGGACTCCCAAAACAGATCC
CGAGGAATTGATCGGTAA
Protein sequenceShow/hide protein sequence
MSAAVAAAAAAAALARRSSSSSSSSTTSNRSSSGSFYSQYYPSPSVSVRQPPLASRYECRKRLDWSKFRQYLRSRCPTLSLSTCTGADIVEFLCYLDEFGDTKVH
ADTCPNFGHRYPVDPYCDCPTQQPWNSVAGLISRLRVAFEENGGNPVTNPFNAVDVKIYLDDIKDSQNRSRGIDR