; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh13G005410 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G005410
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRemorin_C domain-containing protein
Genome locationCmo_Chr13:6279988..6281457
RNA-Seq ExpressionCmoCh13G005410
SyntenyCmoCh13G005410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019494.1 hypothetical protein SDJN02_18455, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-11790.53Show/hide
Query:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAI--LKNLTKVSDMATIIDIS
        MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNM+               L+S  +  LKNLTKVSDMA IIDIS
Subjt:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAI--LKNLTKVSDMATIIDIS

Query:  FFEAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPY
        FFEAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPY
Subjt:  FFEAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPY

Query:  LDRFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
        LDRFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
Subjt:  LDRFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ

XP_022927197.1 uncharacterized protein LOC111434118 isoform X1 [Cucurbita moschata]7.1e-135100Show/hide
Query:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKNLTKVSDMATIIDISFF
        MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKNLTKVSDMATIIDISFF
Subjt:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKNLTKVSDMATIIDISFF

Query:  EAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD
        EAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD
Subjt:  EAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD

Query:  RFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
        RFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
Subjt:  RFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ

XP_022927198.1 uncharacterized protein LOC111434118 isoform X2 [Cucurbita moschata]1.5e-10080.5Show/hide
Query:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKNLTKVSDMATIIDISFF
        MEEWCVGFNDRE                                               IIWCGIWAKRSIENTELLSEAILKNLTKVSDMATIIDISFF
Subjt:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKNLTKVSDMATIIDISFF

Query:  EAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD
        EAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD
Subjt:  EAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD

Query:  RFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
        RFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
Subjt:  RFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ

XP_023001460.1 uncharacterized protein LOC111495588 isoform X1 [Cucurbita maxima]5.6e-13297.51Show/hide
Query:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKNLTKVSDMATIIDISFF
        MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKNLTKVS MATIIDISFF
Subjt:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKNLTKVSDMATIIDISFF

Query:  EAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD
        EAYGGDSMDGSCVA+FS+NRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISG+CLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD
Subjt:  EAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD

Query:  RFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
        RFSLCIKYDVFQVVNVMDANVADFLDL HHEEGKRANVAV+
Subjt:  RFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ

XP_023520199.1 uncharacterized protein LOC111783503 isoform X1 [Cucurbita pepo subsp. pepo]8.6e-13397.93Show/hide
Query:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKNLTKVSDMATIIDISFF
        MEEWCVGFNDREVSICFVVFKPLVFV+DHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEA+LKNLTKVSDMATIIDISFF
Subjt:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKNLTKVSDMATIIDISFF

Query:  EAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD
        EAYGGDSMDGSCVAK SRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISG+CLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD
Subjt:  EAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD

Query:  RFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
        RFSLCIKYDVFQVVNVMDANVADFLDL HHEEGKRANVAVQ
Subjt:  RFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ

TrEMBL top hitse value%identityAlignment
A0A0A0LXV2 Uncharacterized protein2.0e-9875.32Show/hide
Query:  EWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKN-LTKVSDMATIIDISFFE
        EWCVGFND+E+ + FVVFKP+V VVD FVEALKQFSFST NLGCIQ+ VLKSIHGNMIIWCGIW K+ I+N +LLSE +L+  ++K S+MAT++D+SFFE
Subjt:  EWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKN-LTKVSDMATIIDISFFE

Query:  AYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLDR
        AYGG+SMDGSCVAKF+   +ISMIS+AAK  GD+NDLSYACLAIFKSRF+KIEGV SG+CLKSQNR TV+SL+VWNSPFYCYSWILNSDHLNSM+PYLD 
Subjt:  AYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLDR

Query:  FSLCIKYDVFQVVNVMDANVADFLDLGHHEE
        FSLCIKYD++QVVN+ DANV +F DL + EE
Subjt:  FSLCIKYDVFQVVNVMDANVADFLDLGHHEE

A0A1S3BAH1 uncharacterized protein LOC1034879592.7e-10077.06Show/hide
Query:  EWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKN-LTKVSDMATIIDISFFE
        EWCVGFND+E+ + FVVFKP+V VVD FVEALKQFSFST NLGCIQ+ VLKSIHGNMIIWCGIWAKRSI++ +LLSE +L+  ++K S+MAT++D+SFFE
Subjt:  EWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKN-LTKVSDMATIIDISFFE

Query:  AYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLDR
        AYGG+SMDGSCVAKF+   +ISMIS+AAK  GD+NDLSYACLAIFKSRF+KIEG+ SG+CLKSQNR TV+SLYVWNSPFYCYSWILNSDHLNSM+PYLDR
Subjt:  AYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLDR

Query:  FSLCIKYDVFQVVNVMDANVADFLDLGHHEE
        FSLCIKYD++QVVNV DANV+ F DL + EE
Subjt:  FSLCIKYDVFQVVNVMDANVADFLDLGHHEE

A0A6J1EGH4 uncharacterized protein LOC111434118 isoform X13.4e-135100Show/hide
Query:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKNLTKVSDMATIIDISFF
        MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKNLTKVSDMATIIDISFF
Subjt:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKNLTKVSDMATIIDISFF

Query:  EAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD
        EAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD
Subjt:  EAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD

Query:  RFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
        RFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
Subjt:  RFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ

A0A6J1EKC5 uncharacterized protein LOC111434118 isoform X27.2e-10180.5Show/hide
Query:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKNLTKVSDMATIIDISFF
        MEEWCVGFNDRE                                               IIWCGIWAKRSIENTELLSEAILKNLTKVSDMATIIDISFF
Subjt:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKNLTKVSDMATIIDISFF

Query:  EAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD
        EAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD
Subjt:  EAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD

Query:  RFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
        RFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
Subjt:  RFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ

A0A6J1KL93 uncharacterized protein LOC111495588 isoform X12.7e-13297.51Show/hide
Query:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKNLTKVSDMATIIDISFF
        MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKNLTKVS MATIIDISFF
Subjt:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKNLTKVSDMATIIDISFF

Query:  EAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD
        EAYGGDSMDGSCVA+FS+NRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISG+CLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD
Subjt:  EAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD

Query:  RFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
        RFSLCIKYDVFQVVNVMDANVADFLDL HHEEGKRANVAV+
Subjt:  RFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGTGGTGTGTGGGTTTTAATGACAGAGAAGTGAGTATATGCTTCGTTGTATTCAAGCCATTGGTATTTGTTGTGGATCATTTCGTTGAAGCTCTCAAACAATT
CTCCTTCTCCACCACAAATCTTGGTTGCATTCAGAGTTCTGTCCTCAAGAGCATCCATGGAAACATGATCATATGGTGTGGAATTTGGGCAAAAAGATCAATTGAAAACA
CAGAATTATTATCAGAAGCAATCCTCAAGAACTTGACAAAAGTATCAGACATGGCAACCATAATTGATATCAGCTTCTTCGAAGCCTATGGGGGAGACTCCATGGATGGG
TCCTGCGTTGCAAAGTTCTCAAGAAACAGAGTAATATCAATGATTTCAGTGGCTGCAAAGTCCGGCGGCGACATGAACGATCTGTCCTACGCTTGCTTGGCGATATTCAA
GTCCAGATTTCAGAAGATTGAAGGAGTGATATCTGGGGTTTGCTTGAAATCACAGAATAGGTCCACTGTTATGTCACTTTATGTCTGGAATTCGCCCTTTTATTGTTACT
CATGGATCTTGAACTCCGATCATTTGAACTCCATGATGCCTTATCTCGATCGTTTTTCTCTTTGTATTAAATATGATGTGTTTCAAGTGGTGAATGTAATGGATGCAAAT
GTGGCTGATTTTCTTGATTTGGGTCATCATGAAGAGGGGAAAAGAGCAAACGTTGCGGTGCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGTGGTGTGTGGGTTTTAATGACAGAGAAGTGAGTATATGCTTCGTTGTATTCAAGCCATTGGTATTTGTTGTGGATCATTTCGTTGAAGCTCTCAAACAATT
CTCCTTCTCCACCACAAATCTTGGTTGCATTCAGAGTTCTGTCCTCAAGAGCATCCATGGAAACATGATCATATGGTGTGGAATTTGGGCAAAAAGATCAATTGAAAACA
CAGAATTATTATCAGAAGCAATCCTCAAGAACTTGACAAAAGTATCAGACATGGCAACCATAATTGATATCAGCTTCTTCGAAGCCTATGGGGGAGACTCCATGGATGGG
TCCTGCGTTGCAAAGTTCTCAAGAAACAGAGTAATATCAATGATTTCAGTGGCTGCAAAGTCCGGCGGCGACATGAACGATCTGTCCTACGCTTGCTTGGCGATATTCAA
GTCCAGATTTCAGAAGATTGAAGGAGTGATATCTGGGGTTTGCTTGAAATCACAGAATAGGTCCACTGTTATGTCACTTTATGTCTGGAATTCGCCCTTTTATTGTTACT
CATGGATCTTGAACTCCGATCATTTGAACTCCATGATGCCTTATCTCGATCGTTTTTCTCTTTGTATTAAATATGATGTGTTTCAAGTGGTGAATGTAATGGATGCAAAT
GTGGCTGATTTTCTTGATTTGGGTCATCATGAAGAGGGGAAAAGAGCAAACGTTGCGGTGCAATAGTAGGTTTTTTTGTGGTCGGTGTTCGTTGTACATAGGTTAATG
Protein sequenceShow/hide protein sequence
MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMIIWCGIWAKRSIENTELLSEAILKNLTKVSDMATIIDISFFEAYGGDSMDG
SCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLDRFSLCIKYDVFQVVNVMDAN
VADFLDLGHHEEGKRANVAVQ