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CmoCh13G005470 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G005470
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionBEST Arabidopsis thaliana protein match is: Galact s in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Genome locationCmo_Chr13:6326792..6327079
RNA-Seq ExpressionCmoCh13G005470
SyntenyCmoCh13G005470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054015.1 hypothetical protein E6C27_scaffold318G00710 [Cucumis melo var. makuwa]7.3e-2778.35Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQ--VPLRSFSLFEH
        MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEED RE+L+SSSS KIDKFSVSS P     SP S A +AAV+SKYFL+Q  VPL  FS+FEH
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQ--VPLRSFSLFEH

KAG6583880.1 hypothetical protein SDJN03_19812, partial [Cucurbita argyrosperma subsp. sororia]4.6e-29100Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAA
        MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAA
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAA

KAG7019500.1 hypothetical protein SDJN02_18461, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-3493.55Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQVPLRSFSLF
        MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQ    S S F
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQVPLRSFSLF

KGN65872.1 hypothetical protein Csa_023250 [Cucumis sativus]4.0e-2574.49Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSP-ATSAAVSSKYFLNQ--VPLRSFSLFEH
        MAATSRLARFISEACPPQFVSVMRRRSP+VLDTINEED REAL SSSS KIDKFSV         SPPSP +++AA++SKYFL+Q  VPL  FS+FEH
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSP-ATSAAVSSKYFLNQ--VPLRSFSLFEH

PQP93653.1 hypothetical protein Pyn_10926 [Prunus yedoensis var. nudiflora]7.4e-1154.46Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDH------REALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQVPLRSFSLFE
        M A SRLARFI+E  PPQFVSVMR R+ KVLDTINEE+        ++L SSSS K    S SS PS   AS  S A +A   SKYFL +V  R+FS+  
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDH------REALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQVPLRSFSLFE

Query:  H
        H
Subjt:  H

TrEMBL top hitse value%identityAlignment
A0A0A0LYE6 Uncharacterized protein1.9e-2574.49Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSP-ATSAAVSSKYFLNQ--VPLRSFSLFEH
        MAATSRLARFISEACPPQFVSVMRRRSP+VLDTINEED REAL SSSS KIDKFSV         SPPSP +++AA++SKYFL+Q  VPL  FS+FEH
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSP-ATSAAVSSKYFLNQ--VPLRSFSLFEH

A0A314XQS6 Uncharacterized protein3.6e-1154.46Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDH------REALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQVPLRSFSLFE
        M A SRLARFI+E  PPQFVSVMR R+ KVLDTINEE+        ++L SSSS K    S SS PS   AS  S A +A   SKYFL +V  R+FS+  
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDH------REALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQVPLRSFSLFE

Query:  H
        H
Subjt:  H

A0A5A7UJX7 Uncharacterized protein3.5e-2778.35Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQ--VPLRSFSLFEH
        MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEED RE+L+SSSS KIDKFSVSS P     SP S A +AAV+SKYFL+Q  VPL  FS+FEH
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQ--VPLRSFSLFEH

A0A6J5WYZ3 Uncharacterized protein2.3e-1054Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAA----SPPSPATSAAVS---SKYFLNQVPLRSFSLFEH
        A SRLARFI+E  PPQFVSVMR R+ KVLDTINEE+   A +S  SL      +SS PS   A    SPPS A+ +A +   SKYFL +V  R+FS+F H
Subjt:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAA----SPPSPATSAAVS---SKYFLNQVPLRSFSLFEH

A0A803R962 Uncharacterized protein7.9e-1149Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEE-------DHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQVPLRSFSLFEH
        A +R+ARFI+E  PPQFV+VMR R+ KVLDTI EE       D + A SSSS+      S ++  S+ A S  S ++S ++SSKYFL  VP+  FS+FEH
Subjt:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEE-------DHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQVPLRSFSLFEH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30260.1 BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1)1.1e-0944.33Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQVPLR----SFSLFEH
        ATSRLARFI+E  PPQFV+VMRRR+ KVLDTI EE+      S      +   +SS P T   S    + SA+ S    LN+ P+     SF +F++
Subjt:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQVPLR----SFSLFEH

AT4G21060.1 Galactosyltransferase family protein6.9e-0763.41Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRR--SPKVLDTINEEDHRE
        ATSRLARF+SE  PPQFV+VMRR   + + LDTI EE+++E
Subjt:  ATSRLARFISEACPPQFVSVMRRR--SPKVLDTINEEDHRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCACATCTCGATTGGCTAGATTCATAAGCGAAGCTTGCCCTCCCCAATTCGTCTCTGTAATGAGGCGCAGAAGCCCCAAAGTTCTAGACACCATTAACGAAGA
AGATCACAGAGAAGCTCTCTCCTCCTCTTCCTCCTTGAAGATCGACAAATTCTCTGTTTCTTCGCTGCCGTCTACCATGGCTGCTTCGCCGCCGTCTCCTGCAACTTCCG
CCGCCGTTAGTTCCAAATACTTTCTCAATCAGGTCCCCTTGAGGTCCTTCTCCCTTTTCGAGCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCACATCTCGATTGGCTAGATTCATAAGCGAAGCTTGCCCTCCCCAATTCGTCTCTGTAATGAGGCGCAGAAGCCCCAAAGTTCTAGACACCATTAACGAAGA
AGATCACAGAGAAGCTCTCTCCTCCTCTTCCTCCTTGAAGATCGACAAATTCTCTGTTTCTTCGCTGCCGTCTACCATGGCTGCTTCGCCGCCGTCTCCTGCAACTTCCG
CCGCCGTTAGTTCCAAATACTTTCTCAATCAGGTCCCCTTGAGGTCCTTCTCCCTTTTCGAGCACTGA
Protein sequenceShow/hide protein sequence
MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQVPLRSFSLFEH