; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh13G005490 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G005490
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionsignal recognition particle 14 kDa protein
Genome locationCmo_Chr13:6337590..6339127
RNA-Seq ExpressionCmoCh13G005490
SyntenyCmoCh13G005490
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0006614 - SRP-dependent cotranslational protein targeting to membrane (biological process)
GO:0007186 - G protein-coupled receptor signaling pathway (biological process)
GO:0005786 - signal recognition particle, endoplasmic reticulum targeting (cellular component)
GO:0008312 - 7S RNA binding (molecular function)
GO:0030942 - endoplasmic reticulum signal peptide binding (molecular function)
InterPro domainsIPR003210 - Signal recognition particle, SRP14 subunit
IPR009018 - Signal recognition particle, SRP9/SRP14 subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583884.1 Signal recognition particle 14 kDa protein, partial [Cucurbita argyrosperma subsp. sororia]2.9e-5397.52Show/hide
Query:  SIEDVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRE
        +I  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRE
Subjt:  SIEDVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRE

Query:  RKDKKKAAEAEKGLKKKPRKV
        RKDKKKAAEAEKGLKKKPRKV
Subjt:  RKDKKKAAEAEKGLKKKPRKV

KAG7019502.1 Signal recognition particle 14 kDa protein, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-5390.77Show/hide
Query:  GVGLADDFKSIEDVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKA
        G+  A  ++ +  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT+GKKTISTSVGAKDHLRFQASYSTILKA
Subjt:  GVGLADDFKSIEDVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKA

Query:  HMTALKKRERKDKKKAAEAEKGLKKKPRKV
        HMTALKKRERKDKKKAAEAEKGLKKKPRKV
Subjt:  HMTALKKRERKDKKKAAEAEKGLKKKPRKV

KGN66307.2 hypothetical protein Csa_023187 [Cucumis sativus]2.3e-5391.67Show/hide
Query:  HFGVGLADDFKSIEDVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTIL
        HF V       SI  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT+GKKTISTSVGAKDHLRFQASYSTIL
Subjt:  HFGVGLADDFKSIEDVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTIL

Query:  KAHMTALKKRERKDKKKAAEAEKGLKKKPRKV
        KAHMTALKKRERKDKKKAAEAEKGLKKKPRKV
Subjt:  KAHMTALKKRERKDKKKAAEAEKGLKKKPRKV

XP_004145229.1 signal recognition particle 14 kDa protein [Cucumis sativus]1.9e-5299.15Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT+GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAAEAEKGLKKKPRKV
        KKAAEAEKGLKKKPRKV
Subjt:  KKAAEAEKGLKKKPRKV

XP_022927062.1 signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita moschata]5.0e-53100Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAAEAEKGLKKKPRKV
        KKAAEAEKGLKKKPRKV
Subjt:  KKAAEAEKGLKKKPRKV

TrEMBL top hitse value%identityAlignment
A0A0A0LYE0 Uncharacterized protein9.2e-5399.15Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT+GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAAEAEKGLKKKPRKV
        KKAAEAEKGLKKKPRKV
Subjt:  KKAAEAEKGLKKKPRKV

A0A1S3BBI8 signal recognition particle 14 kDa protein9.2e-5399.15Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT+GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAAEAEKGLKKKPRKV
        KKAAEAEKGLKKKPRKV
Subjt:  KKAAEAEKGLKKKPRKV

A0A5A7UG42 Signal recognition particle 14 kDa protein9.2e-5399.15Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT+GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAAEAEKGLKKKPRKV
        KKAAEAEKGLKKKPRKV
Subjt:  KKAAEAEKGLKKKPRKV

A0A6J1EG32 signal recognition particle 14 kDa protein-like isoform X12.4e-53100Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAAEAEKGLKKKPRKV
        KKAAEAEKGLKKKPRKV
Subjt:  KKAAEAEKGLKKKPRKV

A0A6J1KGP7 signal recognition particle 14 kDa protein-like isoform X19.2e-5399.15Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT+GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAAEAEKGLKKKPRKV
        KKAAEAEKGLKKKPRKV
Subjt:  KKAAEAEKGLKKKPRKV

SwissProt top hitse value%identityAlignment
O04421 Signal recognition particle 14 kDa protein9.9e-4484.26Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ+ K+++ G+ IEYRCLIRAT+GKKT+STSVGAKDH RFQASY+TILKAHMTALKKRERKD+
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAAEAEK
        KK+ EAEK
Subjt:  KKAAEAEK

O04433 Signal recognition particle 14 kDa protein3.4e-3668.1Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        V+LQ DPFL+ELTSM+ERSTEKGSVWVT+KRSS+K + +  KM   G+ +EYRCL+RAT+GKK I T++ AK++L+FQASY+T+LKAHM ALKKRERKDK
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAAEAEKGLKKKPRK
        KKAAE EK  +K P+K
Subjt:  KKAAEAEKGLKKKPRK

P37108 Signal recognition particle 14 kDa protein2.3e-1644.86Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKD
        VLL+ + FL ELT +F++    GSV++TLK+   ++K    K T  G +P + +CL+RAT+GKK IST V +K+  +FQ +YS +L+A+M  LKKR++K+
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKD

Query:  KKKAAEA
        K K  +A
Subjt:  KKKAAEA

Q4R5C7 Signal recognition particle 14 kDa protein2.3e-1644.86Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKD
        VLL+ + FL ELT +F++    GSV++TLK+   ++K    K T  G +P + +CL+RAT+GKK IST V +K+  +FQ +YS +L+A+M  LKKR++K+
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKD

Query:  KKKAAEA
        K K  +A
Subjt:  KKKAAEA

Q5RBX7 Signal recognition particle 14 kDa protein2.3e-1644.86Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKD
        VLL+ + FL ELT +F++    GSV++TLK+   ++K    K T  G +P + +CL+RAT+GKK IST V +K+  +FQ +YS +L+A+M  LKKR++K+
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKD

Query:  KKKAAEA
        K K  +A
Subjt:  KKKAAEA

Arabidopsis top hitse value%identityAlignment
AT2G43640.1 Signal recognition particle, SRP9/SRP14 subunit7.0e-4584.26Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ+ K+++ G+ IEYRCLIRAT+GKKT+STSVGAKDH RFQASY+TILKAHMTALKKRERKD+
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAAEAEK
        KK+ EAEK
Subjt:  KKAAEAEK

AT2G43640.2 Signal recognition particle, SRP9/SRP14 subunit7.0e-4584.26Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ+ K+++ G+ IEYRCLIRAT+GKKT+STSVGAKDH RFQASY+TILKAHMTALKKRERKD+
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAAEAEK
        KK+ EAEK
Subjt:  KKAAEAEK

AT2G43640.3 Signal recognition particle, SRP9/SRP14 subunit1.2e-3675Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFE+S EK         +SLKSKVQ+ K+++ G+ IEYRCLIRAT+GKKT+STSVGAKDH RFQASY+TILKAHMTALKKRERKD+
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAAEAEK
        KK+ EAEK
Subjt:  KKAAEAEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCTTCCATATCACTTCGGTGTAGGATTAGCAGATGATTTCAAATCTATTGAAGATGTTCTACTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGA
GCGCAGTACCGAGAAGGGTTCAGTCTGGGTTACTCTAAAACGCTCATCACTGAAGTCCAAAGTGCAGAGAAATAAAATGACCACTGCTGGTCAACCCATCGAATACCGAT
GCCTCATTCGTGCAACTAACGGGAAGAAGACAATTTCAACTTCTGTTGGAGCAAAAGATCACCTGAGATTTCAAGCTTCCTATTCAACCATTCTTAAAGCCCACATGACT
GCTCTCAAAAAGAGAGAGAGAAAGGACAAGAAGAAGGCAGCAGAGGCAGAGAAGGGTCTGAAGAAAAAACCCAGGAAAGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCTTCCATATCACTTCGGTGTAGGATTAGCAGATGATTTCAAATCTATTGAAGATGTTCTACTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGA
GCGCAGTACCGAGAAGGGTTCAGTCTGGGTTACTCTAAAACGCTCATCACTGAAGTCCAAAGTGCAGAGAAATAAAATGACCACTGCTGGTCAACCCATCGAATACCGAT
GCCTCATTCGTGCAACTAACGGGAAGAAGACAATTTCAACTTCTGTTGGAGCAAAAGATCACCTGAGATTTCAAGCTTCCTATTCAACCATTCTTAAAGCCCACATGACT
GCTCTCAAAAAGAGAGAGAGAAAGGACAAGAAGAAGGCAGCAGAGGCAGAGAAGGGTCTGAAGAAAAAACCCAGGAAAGTGTAAAGGGAGGCTCTCTTGCTTCTGTAGGT
CCTCAAGGTAGTGTAACTATTTCTTTGTTACCTTTGTTTTCACGATGATCCTTTGACCTGATGATGAGTGTTATGCTTTCCCATAATTTCTAGGAAAATGAAGAGGAAAG
AATACTTGATCTTGTCCTTTGCTTGGCCATTTTTTTTACTTACAACAAGATTTAAAATAATACATGTGATTTTACTGTAGAATTGTCTGGAAGTAACTACTTTTGGTTCA
TTTAAGCAGAATACAGACTTCCCAACCC
Protein sequenceShow/hide protein sequence
MVLPYHFGVGLADDFKSIEDVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMT
ALKKRERKDKKKAAEAEKGLKKKPRKV