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CmoCh13G005600 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G005600
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein TIFY 5A-like
Genome locationCmo_Chr13:6403116..6403620
RNA-Seq ExpressionCmoCh13G005600
SyntenyCmoCh13G005600
Gene Ontology termsGO:0009611 - response to wounding (biological process)
GO:0031347 - regulation of defense response (biological process)
GO:2000022 - regulation of jasmonic acid mediated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR018467 - CO/COL/TOC1, conserved site
IPR040390 - TIFY/JAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583895.1 Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. sororia]6.6e-5196.52Show/hide
Query:  MENILNCNLELCLSPPSSSPS--TATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFL
        MENILNCNLELCLSPPSSSPS  TATANS STSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGA+PSMRRSLQRFL
Subjt:  MENILNCNLELCLSPPSSSPS--TATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFL

Query:  QKRKHRIQTLSPYSH
        QKRKHRIQTLSPYSH
Subjt:  QKRKHRIQTLSPYSH

KAG7019513.1 Protein TIFY 5A [Cucurbita argyrosperma subsp. argyrosperma]6.0e-5298.26Show/hide
Query:  MENILNCNLELCLSPPSSSPS--TATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFL
        MENILNCNLELCLSPPSSSPS  TATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFL
Subjt:  MENILNCNLELCLSPPSSSPS--TATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFL

Query:  QKRKHRIQTLSPYSH
        QKRKHRIQTLSPYSH
Subjt:  QKRKHRIQTLSPYSH

XP_022927150.1 protein TIFY 5A-like [Cucurbita moschata]1.9e-53100Show/hide
Query:  MENILNCNLELCLSPPSSSPSTATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFLQK
        MENILNCNLELCLSPPSSSPSTATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFLQK
Subjt:  MENILNCNLELCLSPPSSSPSTATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFLQK

Query:  RKHRIQTLSPYSH
        RKHRIQTLSPYSH
Subjt:  RKHRIQTLSPYSH

XP_023001493.1 protein TIFY 5A-like [Cucurbita maxima]3.3e-4286.32Show/hide
Query:  MENILNCNLELCLSPPSSSPST----ATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQR
        MENILNCNLELCLSPPSSSPST    A ANSTSTSCHNH  PTRVP+ D TELQARAIIVRA TQMEAERRLTTC+IS PT+ +SMKSGASPSMRRSLQR
Subjt:  MENILNCNLELCLSPPSSSPST----ATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQR

Query:  FLQKRKHRIQTLSPYSH
        FLQKRKHRIQTLSPYSH
Subjt:  FLQKRKHRIQTLSPYSH

XP_023520316.1 protein TIFY 5A-like [Cucurbita pepo subsp. pepo]1.6e-4995.65Show/hide
Query:  MENILNCNLELCLSPPSSSPS--TATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFL
        MENILNCNLELCLSPPSSSPS  TATANSTSTSCHNHIDPTRVPIPD TELQARAIIVRATTQME ERRLTTCHISSP QRVSMKSGASPSMRRSLQRFL
Subjt:  MENILNCNLELCLSPPSSSPS--TATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFL

Query:  QKRKHRIQTLSPYSH
        QKRKHRIQTLSPYSH
Subjt:  QKRKHRIQTLSPYSH

TrEMBL top hitse value%identityAlignment
A0A0A0LX13 Uncharacterized protein4.7e-2667.23Show/hide
Query:  MENILNCNLELCLSPPSSSPSTATAN----STSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAER-RLTTCHISSPTQRVSMKSG-ASPSMRRSL
        ME + N NLELCLSPPSSSPST T+     S STS  NHI P  +  PD TE+QA+AIIV+AT QMEAER R  TC ISS  +RV M +G ASPS+RRSL
Subjt:  MENILNCNLELCLSPPSSSPSTATAN----STSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAER-RLTTCHISSPTQRVSMKSG-ASPSMRRSL

Query:  QRFLQKRKHRIQTLSPYSH
        QRFLQKRK RIQTLSPY+H
Subjt:  QRFLQKRKHRIQTLSPYSH

A0A1S3BA64 protein TIFY 5A-like3.7e-3171.67Show/hide
Query:  MENILNCNLELCLSPPSSSPSTAT------ANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSG-ASPSMRRS
        ME+  N NLELCLSPPSSSPST T      A S S+S HNHI P  VP PD TE+QA+AIIV AT QMEAERR TTC ISS  +RV M+SG ASPSMRRS
Subjt:  MENILNCNLELCLSPPSSSPSTAT------ANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSG-ASPSMRRS

Query:  LQRFLQKRKHRIQTLSPYSH
        LQRFLQKRK RIQTLSPY+H
Subjt:  LQRFLQKRKHRIQTLSPYSH

A0A6J1CG02 protein TIFY 5A-like1.0e-1755.56Show/hide
Query:  ENILNCNLELCLSPPSSSPSTAT-ANSTSTSCHNHIDPT-----RVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQ
        ++ L+CNLELCLSPP + PS+AT A ST+TS  +H  P        P+ D TELQARAII+ AT QM  E R TTC   S  ++       S SM+RSLQ
Subjt:  ENILNCNLELCLSPPSSSPSTAT-ANSTSTSCHNHIDPT-----RVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQ

Query:  RFLQKRKHRIQTLSPYS
        RFLQKRKHRIQTL+PY+
Subjt:  RFLQKRKHRIQTLSPYS

A0A6J1EN30 protein TIFY 5A-like9.0e-54100Show/hide
Query:  MENILNCNLELCLSPPSSSPSTATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFLQK
        MENILNCNLELCLSPPSSSPSTATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFLQK
Subjt:  MENILNCNLELCLSPPSSSPSTATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFLQK

Query:  RKHRIQTLSPYSH
        RKHRIQTLSPYSH
Subjt:  RKHRIQTLSPYSH

A0A6J1KQP6 protein TIFY 5A-like1.6e-4286.32Show/hide
Query:  MENILNCNLELCLSPPSSSPST----ATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQR
        MENILNCNLELCLSPPSSSPST    A ANSTSTSCHNH  PTRVP+ D TELQARAIIVRA TQMEAERRLTTC+IS PT+ +SMKSGASPSMRRSLQR
Subjt:  MENILNCNLELCLSPPSSSPST----ATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQR

Query:  FLQKRKHRIQTLSPYSH
        FLQKRKHRIQTLSPYSH
Subjt:  FLQKRKHRIQTLSPYSH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30135.1 jasmonate-zim-domain protein 81.7e-0437.1Show/hide
Query:  NCNLELCLSPPS----SSPSTATANSTST-SCHNHIDPTRVPI---------PDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASP---
        NC+LEL L P S    SS +T+   STS+ +   + +  R+ I          D T LQAR+II  A+ +M+   + ++     P +  S      P   
Subjt:  NCNLELCLSPPS----SSPSTATANSTST-SCHNHIDPTRVPI---------PDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASP---

Query:  -SMRRSLQRFLQKRKHRIQTLSPY
         SM++SLQ FLQKRK RIQ  SPY
Subjt:  -SMRRSLQRFLQKRKHRIQTLSPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACATCCTCAACTGCAACTTGGAACTCTGTCTCTCTCCCCCTTCTTCCTCCCCTTCCACCGCCACCGCCAATTCAACGTCGACATCTTGCCACAACCATATCGA
CCCTACTCGAGTCCCGATACCTGATCATACAGAGCTCCAGGCAAGGGCAATAATCGTACGGGCGACAACACAAATGGAGGCCGAGAGAAGATTAACGACATGTCATATTA
GTTCACCGACCCAGCGGGTGTCGATGAAGAGTGGGGCTAGCCCCTCCATGAGAAGATCGTTGCAAAGATTTCTTCAGAAGAGAAAGCATCGCATTCAAACACTTTCACCC
TACTCTCACTAG
mRNA sequenceShow/hide mRNA sequence
CTCCAATGGAAAACATCCTCAACTGCAACTTGGAACTCTGTCTCTCTCCCCCTTCTTCCTCCCCTTCCACCGCCACCGCCAATTCAACGTCGACATCTTGCCACAACCAT
ATCGACCCTACTCGAGTCCCGATACCTGATCATACAGAGCTCCAGGCAAGGGCAATAATCGTACGGGCGACAACACAAATGGAGGCCGAGAGAAGATTAACGACATGTCA
TATTAGTTCACCGACCCAGCGGGTGTCGATGAAGAGTGGGGCTAGCCCCTCCATGAGAAGATCGTTGCAAAGATTTCTTCAGAAGAGAAAGCATCGCATTCAAACACTTT
CACCCTACTCTCACTAGCTTTTCCATTTTTAATTCATGCTTCTTCTCTTCCCTTTGTAAATATAATTTTCTTAATACATTATTACTTAGGTT
Protein sequenceShow/hide protein sequence
MENILNCNLELCLSPPSSSPSTATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFLQKRKHRIQTLSP
YSH