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CmoCh13G006070 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G006070
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionE3 ubiquitin-protein like
Genome locationCmo_Chr13:6670741..6671061
RNA-Seq ExpressionCmoCh13G006070
SyntenyCmoCh13G006070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044701.1 hypothetical protein E6C27_scaffold46G004570 [Cucumis melo var. makuwa]2.9e-2479.73Show/hide
Query:  LSGDRKPNSASSDRSLMSLQRRRDQRIFNCGEKVSALQCSQSPNCRWCRSEVIDDTCFTRTEALRLPQQVFSCD
        LS DRK NS SS R+L +LQRRRDQ+I NCGEKVSA QCSQ+  CRWCRS+VIDDTCFTR EALRLPQQVFSCD
Subjt:  LSGDRKPNSASSDRSLMSLQRRRDQRIFNCGEKVSALQCSQSPNCRWCRSEVIDDTCFTRTEALRLPQQVFSCD

KAG6573331.1 hypothetical protein SDJN03_27218, partial [Cucurbita argyrosperma subsp. sororia]9.0e-3474.53Show/hide
Query:  MGRSSDLPKRLSIDLVSFLFFFFFFFCVSCNGLSGDRKPNSASSDRSLMSLQRRRDQRIFNCGEKVSALQCSQSPNCRWCRSEVIDDTCFTRTEALRLPQ
        MGRS  L   LSI LVSFL  FF F CVS N LS  RK N  SSDR L+SLQRRRD+RI NCGEKVSALQCS++PNCRWCRS+ IDDTCF+R EALRLPQ
Subjt:  MGRSSDLPKRLSIDLVSFLFFFFFFFCVSCNGLSGDRKPNSASSDRSLMSLQRRRDQRIFNCGEKVSALQCSQSPNCRWCRSEVIDDTCFTRTEALRLPQ

Query:  QVFSCD
        QVFSCD
Subjt:  QVFSCD

KDP21149.1 hypothetical protein JCGZ_21620 [Jatropha curcas]3.6e-1446.32Show/hide
Query:  SIDLVSFLFFFFFFFCVSCNGLSGDRKPNSASSDRSLMSLQRRRDQRIFNCGEKVSALQCSQSPNCRWCRSEVIDDTCFTRTEALRLPQQVFSCD
        +I    FL F       S +  S  + P+  +S RSL++ QR   Q+I NC   V+  QCSQ+P CRWC+SE +DD CF++ EA RLPQQVF CD
Subjt:  SIDLVSFLFFFFFFFCVSCNGLSGDRKPNSASSDRSLMSLQRRRDQRIFNCGEKVSALQCSQSPNCRWCRSEVIDDTCFTRTEALRLPQQVFSCD

OMO65460.1 hypothetical protein COLO4_31211 [Corchorus olitorius]7.9e-1450Show/hide
Query:  VSFLFFFFFFFCVSCNGLS-GDRKPNSASSDRSLMSLQRRRDQRIFNCGEKVSALQCSQSPNCRWCRSEVIDDTCFTRTEALRLPQQVFSCD
        +S LF   F    + + LS  D +    S  RSL++LQR    +I NCGE +S  QC Q+P CRWCRSE +DD CF ++EA RLPQQVF CD
Subjt:  VSFLFFFFFFFCVSCNGLS-GDRKPNSASSDRSLMSLQRRRDQRIFNCGEKVSALQCSQSPNCRWCRSEVIDDTCFTRTEALRLPQQVFSCD

XP_038723734.1 uncharacterized protein LOC120015395 [Tripterygium wilfordii]1.6e-1446.32Show/hide
Query:  LVSFLFFFFFFFCVSCNGLSGDRKPNSASSDRSLMSLQRR---RDQRIFNCGEKVSALQCSQSPNCRWCRSEVIDDTCFTRTEALRLPQQVFSCD
        L+  L F F +   S +G++     +S +S RS+++ QRR     ++I +CG+ VS   CSQ+P CRWCRS+ +DD CF++TEA RLPQQVF+CD
Subjt:  LVSFLFFFFFFFCVSCNGLSGDRKPNSASSDRSLMSLQRR---RDQRIFNCGEKVSALQCSQSPNCRWCRSEVIDDTCFTRTEALRLPQQVFSCD

TrEMBL top hitse value%identityAlignment
A0A067JNS3 Uncharacterized protein1.7e-1446.32Show/hide
Query:  SIDLVSFLFFFFFFFCVSCNGLSGDRKPNSASSDRSLMSLQRRRDQRIFNCGEKVSALQCSQSPNCRWCRSEVIDDTCFTRTEALRLPQQVFSCD
        +I    FL F       S +  S  + P+  +S RSL++ QR   Q+I NC   V+  QCSQ+P CRWC+SE +DD CF++ EA RLPQQVF CD
Subjt:  SIDLVSFLFFFFFFFCVSCNGLSGDRKPNSASSDRSLMSLQRRRDQRIFNCGEKVSALQCSQSPNCRWCRSEVIDDTCFTRTEALRLPQQVFSCD

A0A0A0LX55 Uncharacterized protein3.0e-3575.96Show/hide
Query:  RSSDLPKRLSIDLVSFLFFFFFFFCVSCNGLSGDRKPNSASSDRSLMSLQRRRDQRIFNCGEKVSALQCSQSPNCRWCRSEVIDDTCFTRTEALRLPQQV
        RSS L   LSI L+SFLFFFF    +SCN LS DRK NS SS R+L SLQRRRDQ+I NCGEKVSALQCSQ+P CRWCRS++IDDTCFTR EALRLPQQV
Subjt:  RSSDLPKRLSIDLVSFLFFFFFFFCVSCNGLSGDRKPNSASSDRSLMSLQRRRDQRIFNCGEKVSALQCSQSPNCRWCRSEVIDDTCFTRTEALRLPQQV

Query:  FSCD
        FSCD
Subjt:  FSCD

A0A1R3H5C1 Uncharacterized protein3.8e-1450Show/hide
Query:  VSFLFFFFFFFCVSCNGLS-GDRKPNSASSDRSLMSLQRRRDQRIFNCGEKVSALQCSQSPNCRWCRSEVIDDTCFTRTEALRLPQQVFSCD
        +S LF   F    + + LS  D +    S  RSL++LQR    +I NCGE +S  QC Q+P CRWCRSE +DD CF ++EA RLPQQVF CD
Subjt:  VSFLFFFFFFFCVSCNGLS-GDRKPNSASSDRSLMSLQRRRDQRIFNCGEKVSALQCSQSPNCRWCRSEVIDDTCFTRTEALRLPQQVFSCD

A0A218WT29 Uncharacterized protein1.1e-1358.82Show/hide
Query:  PNSASSDRSLMSLQRRRDQRIFNCGEKVSALQCSQSPNCRWCRSEVIDDTCFTRTEALRLPQQVFSCD
        P+S SS RSL + QRR  Q I NC E  S+ +C+Q P CRWCRSE +DDTCF+  EA RLP QVF+C+
Subjt:  PNSASSDRSLMSLQRRRDQRIFNCGEKVSALQCSQSPNCRWCRSEVIDDTCFTRTEALRLPQQVFSCD

A0A5A7TT10 Uncharacterized protein1.4e-2479.73Show/hide
Query:  LSGDRKPNSASSDRSLMSLQRRRDQRIFNCGEKVSALQCSQSPNCRWCRSEVIDDTCFTRTEALRLPQQVFSCD
        LS DRK NS SS R+L +LQRRRDQ+I NCGEKVSA QCSQ+  CRWCRS+VIDDTCFTR EALRLPQQVFSCD
Subjt:  LSGDRKPNSASSDRSLMSLQRRRDQRIFNCGEKVSALQCSQSPNCRWCRSEVIDDTCFTRTEALRLPQQVFSCD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGGAGCTCCGATCTTCCAAAGCGGCTCTCCATTGATCTAGTCTCCTTCCTCTTCTTCTTCTTCTTCTTCTTCTGCGTTTCATGTAATGGTTTATCCGGAGATCG
GAAACCGAACTCGGCCAGTTCGGATCGTAGTTTAATGAGCTTACAGAGAAGGAGAGACCAACGGATCTTTAATTGCGGCGAGAAGGTTTCGGCGTTACAGTGTTCCCAGA
GCCCCAACTGCCGGTGGTGCCGGAGCGAGGTTATTGACGATACCTGCTTCACCAGAACTGAGGCTTTGAGATTGCCCCAACAGGTTTTTTCCTGTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGGAGCTCCGATCTTCCAAAGCGGCTCTCCATTGATCTAGTCTCCTTCCTCTTCTTCTTCTTCTTCTTCTTCTGCGTTTCATGTAATGGTTTATCCGGAGATCG
GAAACCGAACTCGGCCAGTTCGGATCGTAGTTTAATGAGCTTACAGAGAAGGAGAGACCAACGGATCTTTAATTGCGGCGAGAAGGTTTCGGCGTTACAGTGTTCCCAGA
GCCCCAACTGCCGGTGGTGCCGGAGCGAGGTTATTGACGATACCTGCTTCACCAGAACTGAGGCTTTGAGATTGCCCCAACAGGTTTTTTCCTGTGATTGA
Protein sequenceShow/hide protein sequence
MGRSSDLPKRLSIDLVSFLFFFFFFFCVSCNGLSGDRKPNSASSDRSLMSLQRRRDQRIFNCGEKVSALQCSQSPNCRWCRSEVIDDTCFTRTEALRLPQQVFSCD