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CmoCh13G006160 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G006160
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCupin type-1 domain-containing protein
Genome locationCmo_Chr13:6711941..6712438
RNA-Seq ExpressionCmoCh13G006160
SyntenyCmoCh13G006160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583945.1 hypothetical protein SDJN03_19877, partial [Cucurbita argyrosperma subsp. sororia]1.4e-8694.71Show/hide
Query:  MEDQQVLQNLDSLWFFATVFSNRT-----PPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQ
        MEDQQVLQNLDSLWFFATVFSNRT     PPPVVQKPTQ+DF EPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQ
Subjt:  MEDQQVLQNLDSLWFFATVFSNRT-----PPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQ

Query:  RRKIVGEMDLSDAVKEICECWLLEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
        RRKIVGEMDLSDAVKEICECWLLEQRIGGGNQY+RG RKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
Subjt:  RRKIVGEMDLSDAVKEICECWLLEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR

KAG7019562.1 hypothetical protein SDJN02_18523, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-8897.6Show/hide
Query:  MEDQQVLQNLDSLWFFATVFSNRT--PPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRK
        MEDQQVLQNLDSLWFFATVFSNRT  PPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRK
Subjt:  MEDQQVLQNLDSLWFFATVFSNRT--PPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRK

Query:  IVGEMDLSDAVKEICECWLLEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
        IVGEMDLSDAVKEICECWLLEQRIGGGNQY+RG RKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
Subjt:  IVGEMDLSDAVKEICECWLLEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR

XP_022927166.1 uncharacterized protein LOC111434099 [Cucurbita moschata]1.9e-91100Show/hide
Query:  MEDQQVLQNLDSLWFFATVFSNRTPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIV
        MEDQQVLQNLDSLWFFATVFSNRTPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIV
Subjt:  MEDQQVLQNLDSLWFFATVFSNRTPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIV

Query:  GEMDLSDAVKEICECWLLEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
        GEMDLSDAVKEICECWLLEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
Subjt:  GEMDLSDAVKEICECWLLEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR

XP_023000977.1 uncharacterized protein LOC111495257 [Cucurbita maxima]1.1e-8188.95Show/hide
Query:  MEDQQVLQNLDSLWFFATVFSNRTPP-------PVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCL
        MEDQQVLQNLDSLWFFATVFSN+ PP       PVVQKPT++DFVE PGGEIATPIFQNQQNVG+ERNIVDEKTNETGGG G IITEERRKSRGRRWGCL
Subjt:  MEDQQVLQNLDSLWFFATVFSNRTPP-------PVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCL

Query:  GQRRKIVGEMDLSDAVKEICECWLLEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
         QRR+IVGEMDLSDAVKEICECWLLEQRIGGGNQYQRG RKMKKKK+PPFEDSMAMKEHIRSWAYAVACTVR
Subjt:  GQRRKIVGEMDLSDAVKEICECWLLEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR

XP_023520136.1 uncharacterized protein LOC111783440 [Cucurbita pepo subsp. pepo]1.9e-8693.6Show/hide
Query:  MEDQQVLQNLDSLWFFATVFSNRT-------PPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCL
        MEDQQVLQNLDSLWFFATVFSNRT       PPPVVQKPTQ+DFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCL
Subjt:  MEDQQVLQNLDSLWFFATVFSNRT-------PPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCL

Query:  GQRRKIVGEMDLSDAVKEICECWLLEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
        GQRRKIVGEMDLSDAVKEICECWLLEQRIGGGNQYQRG RKMKKKKMPPFEDSMAMKEHIRSWA+AVAC VR
Subjt:  GQRRKIVGEMDLSDAVKEICECWLLEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR

TrEMBL top hitse value%identityAlignment
A0A0A0LX63 Uncharacterized protein4.4e-4162.28Show/hide
Query:  MEDQQVLQNLDSLWFFATVFSNRTPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSR-GRRWGCLGQRRKI
        ME QQVL+N DSLWFFATVFSNRT PPVV KP Q+DFV   G EIATPI +N     EE N+ + K  ET         E+RRK+R GR WG   +++ I
Subjt:  MEDQQVLQNLDSLWFFATVFSNRTPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSR-GRRWGCLGQRRKI

Query:  VGEMDLSDAVKEICECWLLEQ-RIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
        VGE+DLS AVKEICECW  E+ RIGGG          K KKMP FEDSMAMKEHIRSWAYAVACTVR
Subjt:  VGEMDLSDAVKEICECWLLEQ-RIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR

A0A1S3B8X4 uncharacterized protein LOC1034870561.5e-4462.5Show/hide
Query:  MEDQQVLQNLDSLWFFATVFSNRTPPPVVQKPTQHDFVEPPGGEIATPIFQNQQN-VGEERNIVDEKTNETGGGLGLIITEERRKSRGRR-WGCLGQRRK
        ME QQV +N DSLWFF+TVFSNRT PPVV+KP Q+DFVEP G EIATPI +N++N VGEE+ +  E+           + E+RRK+RGRR WG   +R+ 
Subjt:  MEDQQVLQNLDSLWFFATVFSNRTPPPVVQKPTQHDFVEPPGGEIATPIFQNQQN-VGEERNIVDEKTNETGGGLGLIITEERRKSRGRR-WGCLGQRRK

Query:  IVGEMDLSDAVKEICECWLLE-QRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
        +VGE+DLS AVKEICECW  E  RIGGG          K KKMP FEDSMAMKEHIRSWAYAVACTVR
Subjt:  IVGEMDLSDAVKEICECWLLE-QRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR

A0A5A7UQZ2 Uncharacterized protein1.5e-4462.5Show/hide
Query:  MEDQQVLQNLDSLWFFATVFSNRTPPPVVQKPTQHDFVEPPGGEIATPIFQNQQN-VGEERNIVDEKTNETGGGLGLIITEERRKSRGRR-WGCLGQRRK
        ME QQV +N DSLWFF+TVFSNRT PPVV+KP Q+DFVEP G EIATPI +N++N VGEE+ +  E+           + E+RRK+RGRR WG   +R+ 
Subjt:  MEDQQVLQNLDSLWFFATVFSNRTPPPVVQKPTQHDFVEPPGGEIATPIFQNQQN-VGEERNIVDEKTNETGGGLGLIITEERRKSRGRR-WGCLGQRRK

Query:  IVGEMDLSDAVKEICECWLLE-QRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
        +VGE+DLS AVKEICECW  E  RIGGG          K KKMP FEDSMAMKEHIRSWAYAVACTVR
Subjt:  IVGEMDLSDAVKEICECWLLE-QRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR

A0A6J1EGY0 uncharacterized protein LOC1114340999.3e-92100Show/hide
Query:  MEDQQVLQNLDSLWFFATVFSNRTPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIV
        MEDQQVLQNLDSLWFFATVFSNRTPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIV
Subjt:  MEDQQVLQNLDSLWFFATVFSNRTPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIV

Query:  GEMDLSDAVKEICECWLLEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
        GEMDLSDAVKEICECWLLEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
Subjt:  GEMDLSDAVKEICECWLLEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR

A0A6J1KF61 uncharacterized protein LOC1114952575.1e-8288.95Show/hide
Query:  MEDQQVLQNLDSLWFFATVFSNRTPP-------PVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCL
        MEDQQVLQNLDSLWFFATVFSN+ PP       PVVQKPT++DFVE PGGEIATPIFQNQQNVG+ERNIVDEKTNETGGG G IITEERRKSRGRRWGCL
Subjt:  MEDQQVLQNLDSLWFFATVFSNRTPP-------PVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCL

Query:  GQRRKIVGEMDLSDAVKEICECWLLEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
         QRR+IVGEMDLSDAVKEICECWLLEQRIGGGNQYQRG RKMKKKK+PPFEDSMAMKEHIRSWAYAVACTVR
Subjt:  GQRRKIVGEMDLSDAVKEICECWLLEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACCAGCAGGTTCTACAGAATTTGGATTCTCTCTGGTTCTTCGCCACTGTATTCTCAAACAGAACGCCGCCGCCGGTCGTCCAAAAACCTACTCAACACGACTT
CGTTGAGCCTCCGGGAGGAGAAATTGCGACACCCATTTTTCAAAATCAGCAAAATGTTGGGGAGGAGAGGAATATTGTAGACGAGAAGACGAATGAAACCGGCGGCGGGT
TGGGGTTAATAATAACAGAGGAGAGGAGAAAAAGCAGAGGAAGAAGATGGGGGTGTTTGGGGCAGAGGAGAAAGATTGTCGGAGAGATGGATCTGAGTGATGCTGTGAAG
GAGATTTGTGAATGTTGGTTGCTTGAACAGAGAATTGGCGGCGGGAATCAGTACCAGAGAGGGGGGAGGAAGATGAAGAAGAAGAAGATGCCTCCGTTTGAAGATAGTAT
GGCCATGAAAGAGCACATCAGATCCTGGGCTTATGCAGTGGCCTGTACCGTTAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACCAGCAGGTTCTACAGAATTTGGATTCTCTCTGGTTCTTCGCCACTGTATTCTCAAACAGAACGCCGCCGCCGGTCGTCCAAAAACCTACTCAACACGACTT
CGTTGAGCCTCCGGGAGGAGAAATTGCGACACCCATTTTTCAAAATCAGCAAAATGTTGGGGAGGAGAGGAATATTGTAGACGAGAAGACGAATGAAACCGGCGGCGGGT
TGGGGTTAATAATAACAGAGGAGAGGAGAAAAAGCAGAGGAAGAAGATGGGGGTGTTTGGGGCAGAGGAGAAAGATTGTCGGAGAGATGGATCTGAGTGATGCTGTGAAG
GAGATTTGTGAATGTTGGTTGCTTGAACAGAGAATTGGCGGCGGGAATCAGTACCAGAGAGGGGGGAGGAAGATGAAGAAGAAGAAGATGCCTCCGTTTGAAGATAGTAT
GGCCATGAAAGAGCACATCAGATCCTGGGCTTATGCAGTGGCCTGTACCGTTAGATGA
Protein sequenceShow/hide protein sequence
MEDQQVLQNLDSLWFFATVFSNRTPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIVGEMDLSDAVK
EICECWLLEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR