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CmoCh13G006530 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G006530
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSquamosa promoter-binding-like protein
Genome locationCmo_Chr13:6914757..6916687
RNA-Seq ExpressionCmoCh13G006530
SyntenyCmoCh13G006530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019608.1 Squamosa promoter-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-04100Show/hide
Query:  MATGKADGKRRLNYYDMEEEEEEEEEEVE
        MATGKADGKRRLNYYDMEEEEEEEEEEVE
Subjt:  MATGKADGKRRLNYYDMEEEEEEEEEEVE
XP_022927387.1 squamosa promoter-binding-like protein 3 isoform X1 [Cucurbita moschata]2.5e-04100Show/hide
Query:  MATGKADGKRRLNYYDMEEEEEEEEEEVE
        MATGKADGKRRLNYYDMEEEEEEEEEEVE
Subjt:  MATGKADGKRRLNYYDMEEEEEEEEEEVE
XP_022927388.1 squamosa promoter-binding protein 2-like isoform X2 [Cucurbita moschata]2.5e-04100Show/hide
Query:  MATGKADGKRRLNYYDMEEEEEEEEEEVE
        MATGKADGKRRLNYYDMEEEEEEEEEEVE
Subjt:  MATGKADGKRRLNYYDMEEEEEEEEEEVE
XP_022927389.1 squamosa promoter-binding-like protein 3 isoform X3 [Cucurbita moschata]2.5e-04100Show/hide
Query:  MATGKADGKRRLNYYDMEEEEEEEEEEVE
        MATGKADGKRRLNYYDMEEEEEEEEEEVE
Subjt:  MATGKADGKRRLNYYDMEEEEEEEEEEVE
TrEMBL top hitse value%identityAlignment
A0A6J1EH14 Squamosa promoter-binding-like protein1.2e-04100Show/hide
Query:  MATGKADGKRRLNYYDMEEEEEEEEEEVE
        MATGKADGKRRLNYYDMEEEEEEEEEEVE
Subjt:  MATGKADGKRRLNYYDMEEEEEEEEEEVE
A0A6J1EHV6 squamosa promoter-binding-like protein 3 isoform X31.2e-04100Show/hide
Query:  MATGKADGKRRLNYYDMEEEEEEEEEEVE
        MATGKADGKRRLNYYDMEEEEEEEEEEVE
Subjt:  MATGKADGKRRLNYYDMEEEEEEEEEEVE
A0A6J1EKV2 squamosa promoter-binding protein 2-like isoform X21.2e-04100Show/hide
Query:  MATGKADGKRRLNYYDMEEEEEEEEEEVE
        MATGKADGKRRLNYYDMEEEEEEEEEEVE
Subjt:  MATGKADGKRRLNYYDMEEEEEEEEEEVE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGGAAAAGCCGACGGAAAAAGGAGGCTGAACTACTACGACATGGAGGAAGAAGAGGAGGAGGAGGAAGAGGAGGTGGAGGATCTGGGTACGGTGGAGCGGCT
ACGGCGGCGCCGTCGTGCCAGGCGGATAATTGCAATGCCGATCTGTCTAGTTCGAAGCGCTACCACTGCCGCCATAAGGTGTGCGAGTTTCATGCCAAGGCTCTGGCGGT
TATGGTGGCCGGAATCCACCAACGGTTCTGCCAACAATGCAGCAGATTTCATGGTCTACAAGAGTTCGATGAAACAAAAAGGAGTTGCCGGAAGCGGTTGGCCGGACACA
ACCAGCGGCGGCGGAAGAGCTCATCGGATGTCCATGGCGGAACCTCGACCTAGCAATATGCAGAATGATGAAAGAAGGGGCATTTTGTTTTTAATTTTGTTGGTCATTGC
TTCCATTGTTACCAGATTTGCTTGCTCTCTCTCTTCTGTCAATCCAGCCAGCCTTTTGCTTATGCTCTGTTCTACAGACCAATTAGTTCATCTTTTGTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCGGAAAAGCCGACGGAAAAAGGAGGCTGAACTACTACGACATGGAGGAAGAAGAGGAGGAGGAGGAAGAGGAGGTGGAGGATCTGGGTACGGTGGAGCGGCT
ACGGCGGCGCCGTCGTGCCAGGCGGATAATTGCAATGCCGATCTGTCTAGTTCGAAGCGCTACCACTGCCGCCATAAGGTGTGCGAGTTTCATGCCAAGGCTCTGGCGGT
TATGGTGGCCGGAATCCACCAACGGTTCTGCCAACAATGCAGCAGATTTCATGGTCTACAAGAGTTCGATGAAACAAAAAGGAGTTGCCGGAAGCGGTTGGCCGGACACA
ACCAGCGGCGGCGGAAGAGCTCATCGGATGTCCATGGCGGAACCTCGACCTAGCAATATGCAGAATGATGAAAGAAGGGGCATTTTGTTTTTAATTTTGTTGGTCATTGC
TTCCATTGTTACCAGATTTGCTTGCTCTCTCTCTTCTGTCAATCCAGCCAGCCTTTTGCTTATGCTCTGTTCTACAGACCAATTAGTTCATCTTTTGTATTAATCCCTTT
GCAATGTGAAGCAAGATTATGGAGCATATCAGCTTTTGATTTACTTTCAATCTAATTCAACGAAACAATAAGGAATGAAT
Protein sequenceShow/hide protein sequence
MATGKADGKRRLNYYDMEEEEEEEEEEVEDLGTVERLRRRRRARRIIAMPICLVRSATTAAIRCASFMPRLWRLWWPESTNGSANNAADFMVYKSSMKQKGVAGSGWPDT
TSGGGRAHRMSMAEPRPSNMQNDERRGILFLILLVIASIVTRFACSLSSVNPASLLLMLCSTDQLVHLLY