; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh13G006850 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G006850
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr13:7070334..7073590
RNA-Seq ExpressionCmoCh13G006850
SyntenyCmoCh13G006850
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584016.1 hypothetical protein SDJN03_19948, partial [Cucurbita argyrosperma subsp. sororia]3.6e-9098.79Show/hide
Query:  MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLG
        MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLG
Subjt:  MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLG

Query:  HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL
        HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPV CPPERIPWPQHQHNDLSYATTSSH TENSSSL
Subjt:  HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL

XP_022139852.1 uncharacterized protein LOC111010664 [Momordica charantia]4.2e-7887.27Show/hide
Query:  MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLG
        MS+RGN SETF  +MGEE YGWSP GAPLD+ REDHWRHFDNSVDAVSFGFVATAILVSMFL+MAIFERFLRP PTAFSH   R+HLDPEAQ+ FAGKLG
Subjt:  MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLG

Query:  HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL
        HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPV CPPERIPWPQHQHN  SYATTSSH TENSSSL
Subjt:  HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL

XP_022927571.1 uncharacterized protein LOC111434363 [Cucurbita moschata]1.9e-91100Show/hide
Query:  MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLG
        MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLG
Subjt:  MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLG

Query:  HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL
        HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL
Subjt:  HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL

XP_023001755.1 uncharacterized protein LOC111495798 [Cucurbita maxima]4.7e-9098.79Show/hide
Query:  MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLG
        MSERGNSSETFG NMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLG
Subjt:  MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLG

Query:  HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL
        HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPV CPPERIPWPQHQHNDLSYATTSSHFTENSSSL
Subjt:  HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL

XP_023519551.1 uncharacterized protein LOC111782932 [Cucurbita pepo subsp. pepo]7.6e-8896.36Show/hide
Query:  MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLG
        MSERGNSSETFG NMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSH GRRTHLDPEAQMGFAGKLG
Subjt:  MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLG

Query:  HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL
        H SPKMTVYSCGVSVLMPGDHIPTYIAHPAPV CPPERIPWPQHQHND+S+ATTSSHFTENSSSL
Subjt:  HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL

TrEMBL top hitse value%identityAlignment
A0A0A0LRU5 Uncharacterized protein3.8e-7793.33Show/hide
Query:  MGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVS
        MGEEGYGWSP GAPLDVQ+EDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAG RTHLDPEAQMGFAGKL HPSPKMTVYSCGVS
Subjt:  MGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVS

Query:  VLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSS
        VLMPGDHIPTYIAHPAPV C PERIPWPQHQHND+SY T SSHF ENSSS
Subjt:  VLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSS

A0A5D3DRS2 Uncharacterized protein4.2e-7692Show/hide
Query:  MGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVS
        MGEEGYGWSP GAPLDVQ+EDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAG RTHLDPEAQMGF GKL HPSPKMTVYSCGVS
Subjt:  MGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVS

Query:  VLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSS
        VLMPGDHIPTYIAHPAPV C PERIPWPQHQHND+SY T SSH TE+SSS
Subjt:  VLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSS

A0A6J1CF31 uncharacterized protein LOC1110106642.0e-7887.27Show/hide
Query:  MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLG
        MS+RGN SETF  +MGEE YGWSP GAPLD+ REDHWRHFDNSVDAVSFGFVATAILVSMFL+MAIFERFLRP PTAFSH   R+HLDPEAQ+ FAGKLG
Subjt:  MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLG

Query:  HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL
        HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPV CPPERIPWPQHQHN  SYATTSSH TENSSSL
Subjt:  HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL

A0A6J1EI19 uncharacterized protein LOC1114343639.3e-92100Show/hide
Query:  MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLG
        MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLG
Subjt:  MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLG

Query:  HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL
        HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL
Subjt:  HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL

A0A6J1KM25 uncharacterized protein LOC1114957982.3e-9098.79Show/hide
Query:  MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLG
        MSERGNSSETFG NMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLG
Subjt:  MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLG

Query:  HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL
        HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPV CPPERIPWPQHQHNDLSYATTSSHFTENSSSL
Subjt:  HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09812.1 unknown protein1.5e-1744.07Show/hide
Query:  APLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFS--HAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPT
        +P +   E  WR    S++A+SFGFVATAIL+SMFL+MAIFE   RP  ++F   H  R+   D  +Q           P  TV    VSV+MPG+ +P+
Subjt:  APLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFS--HAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPT

Query:  YIAHPAPVSCPPERIPWP
        +IA PAP+ C  E I WP
Subjt:  YIAHPAPVSCPPERIPWP

AT1G11120.1 unknown protein1.5e-3347.09Show/hide
Query:  WSPTGAPLDVQREDHWR-HFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSH---AGRRTHLDPEAQMGFAG---KLGHPSPK---------
        W P GAP++++RE+ W+  FD+SV+AVSFGFVATAIL+SMFL+MAIFER +R T T+ ++   +  R     ++++GF G   KLG+ SPK         
Subjt:  WSPTGAPLDVQREDHWR-HFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSH---AGRRTHLDPEAQMGFAG---KLGHPSPK---------

Query:  -----------------MTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTE
                         MTVYS GVSVLMPGD IPT+IAHPAPV CPP+ I   QHQH     +++S+   E
Subjt:  -----------------MTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTE

AT1G11120.2 unknown protein7.7e-3855.48Show/hide
Query:  WSPTGAPLDVQREDHWR-HFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSH---AGRRTHLDPEAQMGFAG---KLGHPSPKMTVYSCGVS
        W P GAP++++RE+ W+  FD+SV+AVSFGFVATAIL+SMFL+MAIFER +R T T+ ++   +  R     ++++GF G   KLG+ SPKMTVYS GVS
Subjt:  WSPTGAPLDVQREDHWR-HFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSH---AGRRTHLDPEAQMGFAG---KLGHPSPKMTVYSCGVS

Query:  VLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTE
        VLMPGD IPT+IAHPAPV CPP+ I   QHQH     +++S+   E
Subjt:  VLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTE

AT1G58007.1 unknown protein2.6e-1442.72Show/hide
Query:  NSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPW
        +S++A+SFGFVATAIL+ MF++MAI E   R      S       +D  +Q     KL   +  + V +  VSV+MPGD +P+Y+A PAP  C  E I W
Subjt:  NSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPW

Query:  PQH
        P H
Subjt:  PQH

AT1G58007.2 unknown protein2.6e-1442.72Show/hide
Query:  NSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPW
        +S++A+SFGFVATAIL+ MF++MAI E   R      S       +D  +Q     KL   +  + V +  VSV+MPGD +P+Y+A PAP  C  E I W
Subjt:  NSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVSCPPERIPW

Query:  PQH
        P H
Subjt:  PQH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGAGCGGGGAAATTCGTCTGAAACTTTTGGGGATAATATGGGTGAAGAAGGTTATGGATGGTCCCCGACTGGGGCTCCTCTTGACGTCCAGAGAGAGGACCACTG
GAGGCACTTCGACAACTCCGTCGATGCAGTCTCTTTTGGTTTTGTTGCCACTGCCATTCTCGTCTCAATGTTCTTGCTCATGGCTATCTTTGAAAGGTTTTTGCGACCTA
CTCCGACCGCTTTCTCTCACGCCGGCCGTCGGACCCACCTTGACCCTGAGGCTCAGATGGGGTTCGCTGGAAAGCTTGGCCACCCATCACCCAAAATGACTGTGTATTCC
TGTGGAGTTTCAGTGCTAATGCCTGGAGATCATATTCCTACATATATTGCCCACCCGGCTCCCGTCTCGTGTCCCCCTGAACGCATTCCATGGCCACAACATCAACACAA
TGACTTATCCTATGCCACAACCAGTTCCCATTTCACTGAAAACTCGAGTTCCTTATGA
mRNA sequenceShow/hide mRNA sequence
TATTTTCATGCTTTAATCATCTTCTCCGTATGAACGAAAAAACGTACATACTTTACTACTCAGTAGCTTCGCTTTAGCAATGGCGATACTGTAAATTGGCGCAGTCAATT
GGAATCTGAAACTTTCGGAAATTTCTGGGTTTAGCTAAAACAACCACTTCCGAAACGATGATTCTAATGGAATTTCTAATCCAAATTCCAAAGCCCCCTTTTCACCTTCT
GGTAAACTGTGGAATTTTGTTGTGATGGTAATGGTAGCCCACACCTTCAATCTCTCTCTCTCTCTCTTCTGTCGCTGTTCTCTCTCTCTATATTACGAGTTTGGTAGCTG
CTTAAGTTTTTGATAACACCGAAAAACCCTGAAACTTTTCCCTCCAATTCTTCTCCTTCATAATTAAGCTGCCATGAGCTACAAATCCAGCTATGTCGGAGCGGGGAAAT
TCGTCTGAAACTTTTGGGGATAATATGGGTGAAGAAGGTTATGGATGGTCCCCGACTGGGGCTCCTCTTGACGTCCAGAGAGAGGACCACTGGAGGCACTTCGACAACTC
CGTCGATGCAGTCTCTTTTGGTTTTGTTGCCACTGCCATTCTCGTCTCAATGTTCTTGCTCATGGCTATCTTTGAAAGGTTTTTGCGACCTACTCCGACCGCTTTCTCTC
ACGCCGGCCGTCGGACCCACCTTGACCCTGAGGCTCAGATGGGGTTCGCTGGAAAGCTTGGCCACCCATCACCCAAAATGACTGTGTATTCCTGTGGAGTTTCAGTGCTA
ATGCCTGGAGATCATATTCCTACATATATTGCCCACCCGGCTCCCGTCTCGTGTCCCCCTGAACGCATTCCATGGCCACAACATCAACACAATGACTTATCCTATGCCAC
AACCAGTTCCCATTTCACTGAAAACTCGAGTTCCTTATGAGATCGAACATACCGAGGATGCAAAAGAGTTCACTAGTTTTCGATTGATTCAAGCAAAACTGAGGCTGTTT
TTCCCCCATTTCCAGAGGTTCTTATTCTGTATATACGCTCACAGCCCACCTTGCTTTACCTCATCTCTCTGCATTGCCTTCTTCAAGATAGCAAGTTTCACATTTTTATG
CCTTCCGCAAGGTTAAGCTTTTATCTCTTTTTTGGCTCTGAAAATCTGGCTTGACGCCTCTGCAATCATATATACAAATTTCTCTTTGTGCAGGCGAACTTCACCTGTTG
AGATATATATGAAATGCATGCTCGTTTCTTCTATATATACTCGTTTCTACTTGAATCAGTCATTGTTCTTGCATTGCACACAACGATAATATCAAAATGAAGGAAATTGT
TTTTTGTCTGCTACAAAGATCAAGAGTTCAAAACAG
Protein sequenceShow/hide protein sequence
MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYS
CGVSVLMPGDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL