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CmoCh13G008030 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G008030
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProgrammed cell death protein 4-like
Genome locationCmo_Chr13:7585496..7587257
RNA-Seq ExpressionCmoCh13G008030
SyntenyCmoCh13G008030
Gene Ontology termsGO:0006417 - regulation of translation (biological process)
GO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsIPR039778 - Programmed cell death protein 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055292.1 programmed cell death protein 4-like [Cucumis melo var. makuwa]1.7e-4479.34Show/hide
Query:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN
        MASNEGFLTEEQREVLKIA+QN+D+LSSSP SPK SLPEY IKAP+GG VPAPG  VKHVRRS+SGKYIRVKKDGAGGKGTWGKLLDTD DSH DRNDPN
Subjt:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN

Query:  YDSGEVISILSWTSFSDIVYD
        YDSGE    L  ++ SD + D
Subjt:  YDSGEVISILSWTSFSDIVYD

KAG7019710.1 Programmed cell death protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-5099.05Show/hide
Query:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN
        MASNEGFLTEEQREVLKIAT NVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN
Subjt:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN

Query:  YDSGE
        YDSGE
Subjt:  YDSGE

XP_022923982.1 uncharacterized protein LOC111431537 [Cucurbita moschata]4.3e-51100Show/hide
Query:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN
        MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN
Subjt:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN

Query:  YDSGE
        YDSGE
Subjt:  YDSGE

XP_023001234.1 uncharacterized protein LOC111495424 isoform X1 [Cucurbita maxima]1.3e-4796.19Show/hide
Query:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN
        MASNEGFLTEEQREVLK+ATQNVDILSSSP SPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGT GKLLDTDDDSHTDRND N
Subjt:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN

Query:  YDSGE
        YDSGE
Subjt:  YDSGE

XP_023520083.1 uncharacterized protein LOC111783385 isoform X1 [Cucurbita pepo subsp. pepo]3.6e-5099.05Show/hide
Query:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN
        MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHV RSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN
Subjt:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN

Query:  YDSGE
        YDSGE
Subjt:  YDSGE

TrEMBL top hitse value%identityAlignment
A0A1S3AY21 programmed cell death protein 4-like8.4e-4579.34Show/hide
Query:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN
        MASNEGFLTEEQREVLKIA+QN+D+LSSSP SPK SLPEY IKAP+GG VPAPG  VKHVRRS+SGKYIRVKKDGAGGKGTWGKLLDTD DSH DRNDPN
Subjt:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN

Query:  YDSGEVISILSWTSFSDIVYD
        YDSGE    L  ++ SD + D
Subjt:  YDSGEVISILSWTSFSDIVYD

A0A5A7UHI7 Programmed cell death protein 4-like8.4e-4579.34Show/hide
Query:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN
        MASNEGFLTEEQREVLKIA+QN+D+LSSSP SPK SLPEY IKAP+GG VPAPG  VKHVRRS+SGKYIRVKKDGAGGKGTWGKLLDTD DSH DRNDPN
Subjt:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN

Query:  YDSGEVISILSWTSFSDIVYD
        YDSGE    L  ++ SD + D
Subjt:  YDSGEVISILSWTSFSDIVYD

A0A5D3BJE1 Programmed cell death protein 4-like8.4e-4579.34Show/hide
Query:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN
        MASNEGFLTEEQREVLKIA+QN+D+LSSSP SPK SLPEY IKAP+GG VPAPG  VKHVRRS+SGKYIRVKKDGAGGKGTWGKLLDTD DSH DRNDPN
Subjt:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN

Query:  YDSGEVISILSWTSFSDIVYD
        YDSGE    L  ++ SD + D
Subjt:  YDSGEVISILSWTSFSDIVYD

A0A6J1E7L7 uncharacterized protein LOC1114315372.1e-51100Show/hide
Query:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN
        MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN
Subjt:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN

Query:  YDSGE
        YDSGE
Subjt:  YDSGE

A0A6J1KKM6 uncharacterized protein LOC111495424 isoform X16.2e-4896.19Show/hide
Query:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN
        MASNEGFLTEEQREVLK+ATQNVDILSSSP SPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGT GKLLDTDDDSHTDRND N
Subjt:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPN

Query:  YDSGE
        YDSGE
Subjt:  YDSGE

SwissProt top hitse value%identityAlignment
Q8W4Q4 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 31.5e-2252.99Show/hide
Query:  EGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPNYDSG
        EGFLT++QRE++K+ATQ  D L  S   P S L E+  K   GG        VKH RRS++G+ IR KKDG GGKG WGKL+DTD D H D NDPNYDSG
Subjt:  EGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPNYDSG

Query:  EVISILSWTSFSDIVYD
        E    L   + SD + D
Subjt:  EVISILSWTSFSDIVYD

Q94BR1 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 12.2e-2662.26Show/hide
Query:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDD-DSHTDRNDP
        MAS EG LT+ Q + L+IAT N   LSSSP S  +   +  IK+P+GG  P  G   +HVRR++SGK+IRVKK+GAGGKGTWGKLLDTDD DS  D+NDP
Subjt:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDD-DSHTDRNDP

Query:  NYDSGE
        NYDSGE
Subjt:  NYDSGE

Arabidopsis top hitse value%identityAlignment
AT4G24800.1 MA3 domain-containing protein1.1e-2352.99Show/hide
Query:  EGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPNYDSG
        EGFLT++QRE++K+ATQ  D L  S   P S L E+  K   GG        VKH RRS++G+ IR KKDG GGKG WGKL+DTD D H D NDPNYDSG
Subjt:  EGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPNYDSG

Query:  EVISILSWTSFSDIVYD
        E    L   + SD + D
Subjt:  EVISILSWTSFSDIVYD

AT4G24800.2 MA3 domain-containing protein1.1e-2352.99Show/hide
Query:  EGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPNYDSG
        EGFLT++QRE++K+ATQ  D L  S   P S L E+  K   GG        VKH RRS++G+ IR KKDG GGKG WGKL+DTD D H D NDPNYDSG
Subjt:  EGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPNYDSG

Query:  EVISILSWTSFSDIVYD
        E    L   + SD + D
Subjt:  EVISILSWTSFSDIVYD

AT4G24800.3 MA3 domain-containing protein1.1e-2352.99Show/hide
Query:  EGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPNYDSG
        EGFLT++QRE++K+ATQ  D L  S   P S L E+  K   GG        VKH RRS++G+ IR KKDG GGKG WGKL+DTD D H D NDPNYDSG
Subjt:  EGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPNYDSG

Query:  EVISILSWTSFSDIVYD
        E    L   + SD + D
Subjt:  EVISILSWTSFSDIVYD

AT5G63190.1 MA3 domain-containing protein1.6e-2762.26Show/hide
Query:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDD-DSHTDRNDP
        MAS EG LT+ Q + L+IAT N   LSSSP S  +   +  IK+P+GG  P  G   +HVRR++SGK+IRVKK+GAGGKGTWGKLLDTDD DS  D+NDP
Subjt:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDD-DSHTDRNDP

Query:  NYDSGE
        NYDSGE
Subjt:  NYDSGE

AT5G63190.2 MA3 domain-containing protein1.6e-2762.26Show/hide
Query:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDD-DSHTDRNDP
        MAS EG LT+ Q + L+IAT N   LSSSP S  +   +  IK+P+GG  P  G   +HVRR++SGK+IRVKK+GAGGKGTWGKLLDTDD DS  D+NDP
Subjt:  MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDD-DSHTDRNDP

Query:  NYDSGE
        NYDSGE
Subjt:  NYDSGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCGAATGAAGGATTTCTGACTGAAGAGCAGCGGGAAGTGCTGAAAATAGCAACTCAGAATGTGGATATTTTATCATCCTCTCCAAACTCTCCCAAAAGCTCACT
TCCTGAATATCGTATAAAAGCCCCTTCTGGTGGGAACGTCCCGGCACCTGGAGCTAATGTGAAGCACGTGCGTAGATCTAACTCTGGGAAGTATATTAGGGTGAAAAAGG
ATGGGGCTGGTGGAAAGGGCACCTGGGGTAAATTGCTTGACACTGATGATGATTCTCATACTGACAGAAATGATCCTAACTATGACAGTGGTGAGGTAATTTCAATATTG
AGTTGGACTTCATTTTCTGATATTGTGTATGATTGCCCAATATAA
mRNA sequenceShow/hide mRNA sequence
GTTTTTTTTTTTTCCTTTTCCGGTTTTCTTTTTCGCTCTCTTTCTCAGACTCTCAACCGGCAAGAACAAGCAGACAAATTCGGATCGGGGTCCGATAATCCGGCGTCTTT
CTGATCTAGGGTTTTCCCTTTCCTTTCACATTCCAATTTGTTCTTGATATTCACTCTCCGTTGCTGTGATTTGGAGTTCCGATTCGTGTCTCCTGTCTTGGCTCGAGATC
CGGGCCAAGCACAGAAGAATACCACTCCTACAAGTGTTTTCTTTCGGTTCATTGCGCCTCCCAGTGCTCGCCGATAGGTACCCGCATCTCCAGCATAAATGGCCTCGAAT
GAAGGATTTCTGACTGAAGAGCAGCGGGAAGTGCTGAAAATAGCAACTCAGAATGTGGATATTTTATCATCCTCTCCAAACTCTCCCAAAAGCTCACTTCCTGAATATCG
TATAAAAGCCCCTTCTGGTGGGAACGTCCCGGCACCTGGAGCTAATGTGAAGCACGTGCGTAGATCTAACTCTGGGAAGTATATTAGGGTGAAAAAGGATGGGGCTGGTG
GAAAGGGCACCTGGGGTAAATTGCTTGACACTGATGATGATTCTCATACTGACAGAAATGATCCTAACTATGACAGTGGTGAGGTAATTTCAATATTGAGTTGGACTTCA
TTTTCTGATATTGTGTATGATTGCCCAATATAA
Protein sequenceShow/hide protein sequence
MASNEGFLTEEQREVLKIATQNVDILSSSPNSPKSSLPEYRIKAPSGGNVPAPGANVKHVRRSNSGKYIRVKKDGAGGKGTWGKLLDTDDDSHTDRNDPNYDSGEVISIL
SWTSFSDIVYDCPI