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CmoCh13G008410 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G008410
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein transport protein Sec61 subunit gamma
Genome locationCmo_Chr13:7785405..7788197
RNA-Seq ExpressionCmoCh13G008410
SyntenyCmoCh13G008410
Gene Ontology termsGO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0071261 - Ssh1 translocon complex (cellular component)
GO:0008320 - protein transmembrane transporter activity (molecular function)
InterPro domainsIPR001901 - Protein translocase complex, SecE/Sec61-gamma subunit
IPR008158 - Protein translocase SEC61 complex, gamma subunit
IPR023391 - Protein translocase SecE domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584155.1 Protein transport protein Sec61 subunit gamma, partial [Cucurbita argyrosperma subsp. sororia]7.8e-6198.37Show/hide
Query:  MAALQDSNHKPLIPLTMKLQGVILETQRNAKIQRSKHFFSSFIPPHAPNPFKSESKFRETFLLSTFPLHLGEMDAVDSVVDPLREFAKDSVRLVKRCHKP
        MAALQDSNHKPLIPLT+KLQGVILETQRNAKIQRSKHFFSSFIPPHAPNPFKSESKFR+TFLLSTFPLHLGEMDAVDSVVDPLREFAKDSVRLVKRCHKP
Subjt:  MAALQDSNHKPLIPLTMKLQGVILETQRNAKIQRSKHFFSSFIPPHAPNPFKSESKFRETFLLSTFPLHLGEMDAVDSVVDPLREFAKDSVRLVKRCHKP

Query:  DRKEFTKVAVRTAIGFVVMGFVG
        DRKEFTKVAVRTAIGFVVMGFVG
Subjt:  DRKEFTKVAVRTAIGFVVMGFVG

XP_008439824.1 PREDICTED: protein transport protein Sec61 subunit gamma [Cucumis melo]3.0e-28100Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_020163946.1 protein transport protein Sec61 subunit gamma [Aegilops tauschii subsp. strangulata]3.9e-2898.55Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_022137357.1 uncharacterized protein LOC111008832 isoform X1 [Momordica charantia]3.3e-3561.11Show/hide
Query:  KLQGVILETQRNAKIQ--------RSKHFFSS------------------------------FIPPHAPNPFKSESKFRETFLLSTFPLHLGEMDAVDSV
        KLQ VIL+TQRNAKIQ         +KH  +                               F+PP      K E+K    FL  TF  HLGEMDAVDSV
Subjt:  KLQGVILETQRNAKIQ--------RSKHFFSS------------------------------FIPPHAPNPFKSESKFRETFLLSTFPLHLGEMDAVDSV

Query:  VDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        VDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  VDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_022137358.1 uncharacterized protein LOC111008832 isoform X2 [Momordica charantia]1.6e-3460.25Show/hide
Query:  LQGVILETQRNAKIQ--------RSKHFFSS------------------------------FIPPHAPNPFKSESKFRETFLLSTFPLHLGEMDAVDSVV
        +Q VIL+TQRNAKIQ         +KH  +                               F+PP      K E+K    FL  TF  HLGEMDAVDSVV
Subjt:  LQGVILETQRNAKIQ--------RSKHFFSS------------------------------FIPPHAPNPFKSESKFRETFLLSTFPLHLGEMDAVDSVV

Query:  DPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        DPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  DPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

TrEMBL top hitse value%identityAlignment
A0A453NIA0 Uncharacterized protein8.5e-2989.87Show/hide
Query:  LSTFPLHLGEMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        LS  P     MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  LSTFPLHLGEMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A6J1C817 uncharacterized protein LOC111008832 isoform X11.6e-3561.11Show/hide
Query:  KLQGVILETQRNAKIQ--------RSKHFFSS------------------------------FIPPHAPNPFKSESKFRETFLLSTFPLHLGEMDAVDSV
        KLQ VIL+TQRNAKIQ         +KH  +                               F+PP      K E+K    FL  TF  HLGEMDAVDSV
Subjt:  KLQGVILETQRNAKIQ--------RSKHFFSS------------------------------FIPPHAPNPFKSESKFRETFLLSTFPLHLGEMDAVDSV

Query:  VDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        VDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  VDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A6J1CA50 uncharacterized protein LOC111008832 isoform X28.0e-3560.25Show/hide
Query:  LQGVILETQRNAKIQ--------RSKHFFSS------------------------------FIPPHAPNPFKSESKFRETFLLSTFPLHLGEMDAVDSVV
        +Q VIL+TQRNAKIQ         +KH  +                               F+PP      K E+K    FL  TF  HLGEMDAVDSVV
Subjt:  LQGVILETQRNAKIQ--------RSKHFFSS------------------------------FIPPHAPNPFKSESKFRETFLLSTFPLHLGEMDAVDSVV

Query:  DPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        DPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  DPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A6J1GT74 protein transport protein Sec61 subunit gamma1.5e-28100Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A6J1JW08 protein transport protein Sec61 subunit gamma1.5e-28100Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

SwissProt top hitse value%identityAlignment
P0DI74 Protein transport protein Sec61 subunit gamma-12.2e-2994.12Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

P0DI75 Protein transport protein Sec61 subunit gamma-22.2e-2994.12Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

P38385 Protein transport protein Sec61 subunit gamma1.1e-3098.55Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

Q7Z1B8 Protein transport protein Sec61 subunit gamma1.3e-2175Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MD V   ++P R+FAKDS+RLVKRC KPDRKEF K+AV TAIGF +MGF+GFFVKLI IPINNIIVGS
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

Q9SMP2 Protein transport protein Sec61 subunit gamma-31.6e-2788.24Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        M+A+DS +DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIPINNIIVGS
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

Arabidopsis top hitse value%identityAlignment
AT3G48570.1 secE/sec61-gamma protein transport protein1.1e-2888.24Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        M+A+DS +DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIPINNIIVGS
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

AT4G24920.1 secE/sec61-gamma protein transport protein1.5e-3094.12Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

AT5G50460.1 secE/sec61-gamma protein transport protein1.5e-3094.12Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGAGTCGCTGAAGAAGAAGAACCAGTACCGCTCGCTCTGTCCTCACTTGAAACTCTCCCTTCCATGGCCGCGCTTCAAGATTCAAATCACAAACCATTGATTCC
GTTAACAATGAAGCTTCAAGGAGTGATCCTCGAAACACAAAGGAATGCAAAAATTCAGCGCTCAAAGCATTTCTTTTCTTCCTTCATACCCCCACACGCCCCCAACCCGT
TCAAATCTGAATCCAAATTTCGCGAAACATTTCTTTTGTCGACGTTCCCTTTGCATCTCGGAGAAATGGATGCCGTAGATTCTGTTGTTGATCCTCTCAGAGAGTTCGCC
AAGGACAGCGTTCGTCTCGTTAAGAGGTGTCATAAACCCGATCGCAAGGAATTCACCAAGGTTGCCGTTCGTACCGCTATCGGCTTCGTTGTGATGGGATTTGTAGGGTT
CTTTGTCAAGCTAATCTTCATTCCGATCAACAATATCATCGTCGGATCTGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATTTCTCCCTCCACTGGTTTCGCCATGGAAGGAGTCGCTGAAGAAGAAGAACCAGTACCGCTCGCTCTGTCCTCACTTGAAACTCTCCCTTCCATGGCCGCGCTTCAAGA
TTCAAATCACAAACCATTGATTCCGTTAACAATGAAGCTTCAAGGAGTGATCCTCGAAACACAAAGGAATGCAAAAATTCAGCGCTCAAAGCATTTCTTTTCTTCCTTCA
TACCCCCACACGCCCCCAACCCGTTCAAATCTGAATCCAAATTTCGCGAAACATTTCTTTTGTCGACGTTCCCTTTGCATCTCGGAGAAATGGATGCCGTAGATTCTGTT
GTTGATCCTCTCAGAGAGTTCGCCAAGGACAGCGTTCGTCTCGTTAAGAGGTGTCATAAACCCGATCGCAAGGAATTCACCAAGGTTGCCGTTCGTACCGCTATCGGCTT
CGTTGTGATGGGATTTGTAGGGTTCTTTGTCAAGCTAATCTTCATTCCGATCAACAATATCATCGTCGGATCTGGTTAG
Protein sequenceShow/hide protein sequence
MEGVAEEEEPVPLALSSLETLPSMAALQDSNHKPLIPLTMKLQGVILETQRNAKIQRSKHFFSSFIPPHAPNPFKSESKFRETFLLSTFPLHLGEMDAVDSVVDPLREFA
KDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG