; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh13G008660 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G008660
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionpentatricopeptide repeat-containing protein At3g22470, mitochondrial-like
Genome locationCmo_Chr13:7907635..7908405
RNA-Seq ExpressionCmoCh13G008660
SyntenyCmoCh13G008660
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584178.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]8.6e-13196.88Show/hide
Query:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
        MKT+ QRLL LHRLPLPPQLVHDQIPAIGTPFS  SSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
Subjt:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS

Query:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
        HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYS+QRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
Subjt:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP

Query:  DYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDGIINNWIE
        DYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLD II NWIE
Subjt:  DYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDGIINNWIE

KAG7019769.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-13398.05Show/hide
Query:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
        MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSF SSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
Subjt:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS

Query:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
        HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYS+QRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
Subjt:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP

Query:  DYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDGIINNWIE
        DYDLRSWVFRCLLREAMIG+ATELSETLNSIGDRNTSDHLRRVSELLD II NWIE
Subjt:  DYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDGIINNWIE

XP_022923926.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucurbita moschata]1.8e-136100Show/hide
Query:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
        MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
Subjt:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS

Query:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
        HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
Subjt:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP

Query:  DYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDGIINNWIE
        DYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDGIINNWIE
Subjt:  DYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDGIINNWIE

XP_023000755.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucurbita maxima]4.9e-12694.14Show/hide
Query:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
        MKTI QRLLPL RLPLPPQLVHDQIPAIGTPFS  SSSSSVYDSAASKINTTLTQDELTKISLLLPRLC YNHHSTAITLLDTALLTNLSLQSLPLSILS
Subjt:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS

Query:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
        HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLI SYSKQRK KEALKIFHWMLRPGSPCKPDE VYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
Subjt:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP

Query:  DYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDGIINNWIE
        DYDLRSWV  CLLREAMIGEATELSETLNSI DRN SDHLR+VSELLD +INNWIE
Subjt:  DYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDGIINNWIE

XP_023520260.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucurbita pepo subsp. pepo]2.2e-12694.53Show/hide
Query:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
        MKTI QRLLPLHR PLPPQLVHDQIPAIGTPFS  SSSSSVYDSAASKINTTLTQDELTKISLLLPRLC  NHHSTAITLLD ALLTNLSLQSLPLSILS
Subjt:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS

Query:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
        HSLASQSDFALTMSLLTRL HHRNALLYSSPIITMLI SY KQRK KEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
Subjt:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP

Query:  DYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDGIINNWIE
        DYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTS+HL++VSELLDGIINNWIE
Subjt:  DYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDGIINNWIE

TrEMBL top hitse value%identityAlignment
A0A0A0LRQ9 Uncharacterized protein3.4e-9373.26Show/hide
Query:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSS--SSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSI
        MK I Q+LL L RLPL P+L+  QIPAI +PFS  SS  S S   S A+K NTTLT DELT+I+LLLPRLC +NH STAI+LL   LLTN SL SL LS+
Subjt:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSS--SSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSI

Query:  LSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHH NALLYS+PI+TMLI SY K+RK KEALK+FHWMLRPGSPCKP+ERVYKTLIAGL RKGM  DALK+L+NMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNL

Query:  VPDYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDGIINNWIE
        VPD DLR+WVFR LL+EAMI EA E ++ LN +GD+NT DHLRRVSELL+ II NWI+
Subjt:  VPDYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDGIINNWIE

A0A5A7UP05 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X26.1e-9075.1Show/hide
Query:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSS--SSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSI
        MK I Q+LL L RLPL P+L+  QIP I +PFS  SS  S S   S A++ NTTLT DELT+I+LLLPRLC YNH STAITLL   LLTN SLQSL LS+
Subjt:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSS--SSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSI

Query:  LSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHH NALLYS+PI+TMLI SY K+RK KEALKIFHWMLRPGSPCKP+ERVYKTLIAGL RKGM  DALK+L+NMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNL

Query:  VPDYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRV
        VPD DLR+WVFRCLLREAMI EA E +ET N +GD++T DHLRRV
Subjt:  VPDYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRV

A0A5D3BHR6 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X16.1e-9075.1Show/hide
Query:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSS--SSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSI
        MK I Q+LL L RLPL P+L+  QIP I +PFS  SS  S S   S A++ NTTLT DELT+I+LLLPRLC YNH STAITLL   LLTN SLQSL LS+
Subjt:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSS--SSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSI

Query:  LSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHH NALLYS+PI+TMLI SY K+RK KEALKIFHWMLRPGSPCKP+ERVYKTLIAGL RKGM  DALK+L+NMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNL

Query:  VPDYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRV
        VPD DLR+WVFRCLLREAMI EA E +ET N +GD++T DHLRRV
Subjt:  VPDYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRV

A0A6J1E820 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like8.6e-137100Show/hide
Query:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
        MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
Subjt:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS

Query:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
        HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
Subjt:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP

Query:  DYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDGIINNWIE
        DYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDGIINNWIE
Subjt:  DYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDGIINNWIE

A0A6J1KEJ7 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like2.4e-12694.14Show/hide
Query:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
        MKTI QRLLPL RLPLPPQLVHDQIPAIGTPFS  SSSSSVYDSAASKINTTLTQDELTKISLLLPRLC YNHHSTAITLLDTALLTNLSLQSLPLSILS
Subjt:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS

Query:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
        HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLI SYSKQRK KEALKIFHWMLRPGSPCKPDE VYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
Subjt:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP

Query:  DYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDGIINNWIE
        DYDLRSWV  CLLREAMIGEATELSETLNSI DRN SDHLR+VSELLD +INNWIE
Subjt:  DYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDGIINNWIE

SwissProt top hitse value%identityAlignment
O49436 Pentatricopeptide repeat-containing protein At4g200901.8e-0626.7Show/hide
Query:  LLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQ---SDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPG
        L+  LC       A++LL+  + +      +    L + L  Q   +D    +S +    +H N  +YS     +LI    K+ K +EA+ ++  M   G
Subjt:  LLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQ---SDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPG

Query:  SPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGEATELSETLNSIG-DRNTSDHLRRVSELLDGI
          CKP+  VY  L+ GLCR+G   +A +IL  MI S  +P+    S + +   +  +  EA ++ + ++  G  RN   +    S L+DG+
Subjt:  SPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGEATELSETLNSIG-DRNTSDHLRRVSELLDGI

P0C8Q3 Pentatricopeptide repeat-containing protein At4g198901.1e-0642.67Show/hide
Query:  LLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
        L+ +    T +I  Y K+  +  ALK FH M R G  C PD   Y +LI+GLC+K MV +A K+ + MID  L P
Subjt:  LLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP

Q6NQ83 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial2.4e-0626.94Show/hide
Query:  ELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWM
        +L  +S L+  LC     S A+ L+D  +        +    + + L    + AL + L  +++  RN +  S    +++I S  K     +AL +F+ M
Subjt:  ELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWM

Query:  LRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDG
           G   K D   Y +LI GLC  G   D  K+L+ MI  N++PD    S +    ++E  + EA EL    N +  R  +      + L+DG
Subjt:  LRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDG

Q9FMF6 Pentatricopeptide repeat-containing protein At5g64320, mitochondrial1.4e-0634.83Show/hide
Query:  LILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGEATEL
        LI ++ K+ ++ EA++IF  M R G  CKPD   + +LI+GLC    +  AL +L++MI   +V +    + +    LR   I EA +L
Subjt:  LILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGEATEL

Q9LR67 Pentatricopeptide repeat-containing protein At1g03560, mitochondrial1.8e-0631.62Show/hide
Query:  TMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGEATELSETLNSIGD
        +++I    K+ KL E   +F  M+R GS  KP+  +Y  LI G  + G V DA+++L  MID    PD    S V   L +   + EA +   T    G 
Subjt:  TMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGEATELSETLNSIGD

Query:  RNTSDHLRRVSELLDGI
           + +    S L+DG+
Subjt:  RNTSDHLRRVSELLDGI

Arabidopsis top hitse value%identityAlignment
AT1G03560.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.3e-0731.62Show/hide
Query:  TMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGEATELSETLNSIGD
        +++I    K+ KL E   +F  M+R GS  KP+  +Y  LI G  + G V DA+++L  MID    PD    S V   L +   + EA +   T    G 
Subjt:  TMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGEATELSETLNSIGD

Query:  RNTSDHLRRVSELLDGI
           + +    S L+DG+
Subjt:  RNTSDHLRRVSELLDGI

AT3G22470.1 Pentatricopeptide repeat (PPR) superfamily protein1.7e-0726.94Show/hide
Query:  ELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWM
        +L  +S L+  LC     S A+ L+D  +        +    + + L    + AL + L  +++  RN +  S    +++I S  K     +AL +F+ M
Subjt:  ELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWM

Query:  LRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDG
           G   K D   Y +LI GLC  G   D  K+L+ MI  N++PD    S +    ++E  + EA EL    N +  R  +      + L+DG
Subjt:  LRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGEATELSETLNSIGDRNTSDHLRRVSELLDG

AT4G19890.1 Pentatricopeptide repeat (PPR-like) superfamily protein7.5e-0842.67Show/hide
Query:  LLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
        L+ +    T +I  Y K+  +  ALK FH M R G  C PD   Y +LI+GLC+K MV +A K+ + MID  L P
Subjt:  LLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP

AT4G20090.1 Pentatricopeptide repeat (PPR) superfamily protein1.3e-0726.7Show/hide
Query:  LLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQ---SDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPG
        L+  LC       A++LL+  + +      +    L + L  Q   +D    +S +    +H N  +YS     +LI    K+ K +EA+ ++  M   G
Subjt:  LLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQ---SDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPG

Query:  SPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGEATELSETLNSIG-DRNTSDHLRRVSELLDGI
          CKP+  VY  L+ GLCR+G   +A +IL  MI S  +P+    S + +   +  +  EA ++ + ++  G  RN   +    S L+DG+
Subjt:  SPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGEATELSETLNSIG-DRNTSDHLRRVSELLDGI

AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein9.8e-0834.83Show/hide
Query:  LILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGEATEL
        LI ++ K+ ++ EA++IF  M R G  CKPD   + +LI+GLC    +  AL +L++MI   +V +    + +    LR   I EA +L
Subjt:  LILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGEATEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACAATAACGCAACGGCTTCTTCCCCTCCACCGTCTTCCACTTCCACCGCAGCTCGTTCACGATCAAATTCCGGCCATTGGTACTCCATTTTCGTTTTTTTCCTC
CTCCTCCTCCGTTTATGATTCCGCAGCCAGTAAAATCAATACGACTCTTACCCAAGACGAGCTTACAAAGATCAGCCTCCTTCTTCCTCGTCTCTGTTTCTACAACCACC
ACTCCACTGCAATAACACTTCTGGACACGGCGCTCCTCACGAATCTTTCACTTCAATCGCTTCCTCTCTCGATTCTTTCCCATTCCCTTGCTTCCCAATCCGATTTCGCC
CTCACGATGTCCCTCCTCACCCGTCTCAAGCACCACCGGAATGCGCTGCTCTATTCAAGCCCTATTATCACCATGCTTATTTTATCTTATTCTAAGCAGCGGAAATTGAA
GGAGGCCTTGAAGATTTTCCATTGGATGCTAAGACCAGGGTCGCCATGTAAGCCGGATGAGAGGGTTTATAAAACCCTAATCGCGGGACTGTGTAGGAAGGGTATGGTAC
TTGATGCTTTGAAGATTCTGAAGAACATGATTGACTCGAATTTGGTTCCGGATTACGATCTGAGGAGTTGGGTTTTTAGGTGTTTGCTGAGAGAAGCGATGATCGGCGAA
GCAACAGAGTTGAGTGAGACTTTGAATTCCATTGGCGATCGGAATACCAGTGACCATCTGAGAAGGGTGTCGGAATTGTTGGACGGTATCATCAACAATTGGATTGAATA
G
mRNA sequenceShow/hide mRNA sequence
ATGAAGACAATAACGCAACGGCTTCTTCCCCTCCACCGTCTTCCACTTCCACCGCAGCTCGTTCACGATCAAATTCCGGCCATTGGTACTCCATTTTCGTTTTTTTCCTC
CTCCTCCTCCGTTTATGATTCCGCAGCCAGTAAAATCAATACGACTCTTACCCAAGACGAGCTTACAAAGATCAGCCTCCTTCTTCCTCGTCTCTGTTTCTACAACCACC
ACTCCACTGCAATAACACTTCTGGACACGGCGCTCCTCACGAATCTTTCACTTCAATCGCTTCCTCTCTCGATTCTTTCCCATTCCCTTGCTTCCCAATCCGATTTCGCC
CTCACGATGTCCCTCCTCACCCGTCTCAAGCACCACCGGAATGCGCTGCTCTATTCAAGCCCTATTATCACCATGCTTATTTTATCTTATTCTAAGCAGCGGAAATTGAA
GGAGGCCTTGAAGATTTTCCATTGGATGCTAAGACCAGGGTCGCCATGTAAGCCGGATGAGAGGGTTTATAAAACCCTAATCGCGGGACTGTGTAGGAAGGGTATGGTAC
TTGATGCTTTGAAGATTCTGAAGAACATGATTGACTCGAATTTGGTTCCGGATTACGATCTGAGGAGTTGGGTTTTTAGGTGTTTGCTGAGAGAAGCGATGATCGGCGAA
GCAACAGAGTTGAGTGAGACTTTGAATTCCATTGGCGATCGGAATACCAGTGACCATCTGAGAAGGGTGTCGGAATTGTTGGACGGTATCATCAACAATTGGATTGAATA
G
Protein sequenceShow/hide protein sequence
MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFFSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQSDFA
LTMSLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGE
ATELSETLNSIGDRNTSDHLRRVSELLDGIINNWIE