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CmoCh13G009240 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G009240
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein DELETION OF SUV3 SUPPRESSOR 1(I)-like
Genome locationCmo_Chr13:8152568..8155678
RNA-Seq ExpressionCmoCh13G009240
SyntenyCmoCh13G009240
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006406 - mRNA export from nucleus (biological process)
GO:0043248 - proteasome assembly (biological process)
GO:0008541 - proteasome regulatory particle, lid subcomplex (cellular component)
InterPro domainsIPR007834 - DSS1/SEM1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573049.1 Protein DELETION OF SUV3 SUPPRESSOR 1(I), partial [Cucurbita argyrosperma subsp. sororia]3.9e-2897.26Show/hide
Query:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MATE+KTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELES TEKK
Subjt:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

XP_004152470.1 protein DELETION OF SUV3 SUPPRESSOR 1(I) [Cucumis sativus]1.0e-2897.26Show/hide
Query:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MATE+KTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

XP_022923645.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita moschata]1.6e-29100Show/hide
Query:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

XP_022954951.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita moschata]3.9e-2897.26Show/hide
Query:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MATE+KTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELES TEKK
Subjt:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

XP_038893721.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Benincasa hispida]5.1e-2894.52Show/hide
Query:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MATE+KTATEEVK+DLFEDDDEFEEFEINEEWEVKEEGKE+TQQWEDDWDDDDVNDDFSLQLRRELESN EKK
Subjt:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

TrEMBL top hitse value%identityAlignment
A0A0A0LU33 Uncharacterized protein5.0e-2997.26Show/hide
Query:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MATE+KTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

A0A1S3AW15 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like5.0e-2997.26Show/hide
Query:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MATE+KTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

A0A5A7UJ57 Putative 26S proteasome complex subunit sem1-15.0e-2997.26Show/hide
Query:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MATE+KTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

A0A6J1ECF8 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like7.7e-30100Show/hide
Query:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

A0A6J1KGG4 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like7.7e-30100Show/hide
Query:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

SwissProt top hitse value%identityAlignment
P60896 26S proteasome complex subunit SEM13.7e-0550.79Show/hide
Query:  EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEK
        + V + L E+DDEFEEF   E+W   +E ++    WED+WDDD+V DDFS QLR ELE +  K
Subjt:  EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEK

P60897 26S proteasome complex subunit SEM13.7e-0550.79Show/hide
Query:  EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEK
        + V + L E+DDEFEEF   E+W   +E ++    WED+WDDD+V DDFS QLR ELE +  K
Subjt:  EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEK

Q3ZBR6 26S proteasome complex subunit SEM13.7e-0550.79Show/hide
Query:  EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEK
        + V + L E+DDEFEEF   E+W   +E ++    WED+WDDD+V DDFS QLR ELE +  K
Subjt:  EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEK

Q9FL96 Protein DSS1 HOMOLOG ON CHROMOSOME V6.3e-2172.6Show/hide
Query:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MA E K A E VK+DLFEDDDEFEEFEINE+W  KEE KE++ QWEDDWDDDDV+DDFS QL++ELE+ +EKK
Subjt:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

Q9XIR8 Protein DELETION OF SUV3 SUPPRESSOR 1(I)4.3e-2277.03Show/hide
Query:  MATETKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MA E K AT E VK+DLFEDDDEFEEFEINE+W  KEE KE++QQWEDDWDDDDVNDDFS QLR+ELE+ T+KK
Subjt:  MATETKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

Arabidopsis top hitse value%identityAlignment
AT1G64750.1 deletion of SUV3 suppressor 1(I)3.1e-2377.03Show/hide
Query:  MATETKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MA E K AT E VK+DLFEDDDEFEEFEINE+W  KEE KE++QQWEDDWDDDDVNDDFS QLR+ELE+ T+KK
Subjt:  MATETKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

AT1G64750.2 deletion of SUV3 suppressor 1(I)3.1e-2377.03Show/hide
Query:  MATETKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MA E K AT E VK+DLFEDDDEFEEFEINE+W  KEE KE++QQWEDDWDDDDVNDDFS QLR+ELE+ T+KK
Subjt:  MATETKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

AT1G64750.3 deletion of SUV3 suppressor 1(I)3.3e-1749.57Show/hide
Query:  MATETKTATEE-VKIDLFEDDDEFEEFEINE-----------------------------------------EWEVKEEGKEITQQWEDDWDDDDVNDDF
        MA E K AT E VK+DLFEDDDEFEEFEINE                                         +W  KEE KE++QQWEDDWDDDDVNDDF
Subjt:  MATETKTATEE-VKIDLFEDDDEFEEFEINE-----------------------------------------EWEVKEEGKEITQQWEDDWDDDDVNDDF

Query:  SLQLRRELESNTEKK
        S QLR+ELE+ T+KK
Subjt:  SLQLRRELESNTEKK

AT5G45010.1 DSS1 homolog on chromosome V4.4e-2272.6Show/hide
Query:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MA E K A E VK+DLFEDDDEFEEFEINE+W  KEE KE++ QWEDDWDDDDV+DDFS QL++ELE+ +EKK
Subjt:  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTGAAACCAAAACGGCGACTGAGGAAGTTAAGATTGACCTCTTTGAAGATGATGATGAGTTCGAAGAGTTTGAGATTAATGAAGAATGGGAAGTCAAA
GAAGAAGGGAAGGAAATTACACAGCAGTGGGAAGACGACTGGGATGACGATGATGTCAATGACGACTTCTCCTTGCAGCTTCGGAGAGAATTGGAGAGCAACACC
GAGAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
CAAGATCGGAGCACAGCGCTCACCGCTTTGACCTCTGGGTCGTGACCTGATAATTAGGGCGAAAATTTCATATGCGGAAACAATAAAATTTTTCAGTTGGTTCAT
CTTCTTCGCTCTCTCTCGAGTCTTCCCCTAGCTTTTCGTTTCTCTCTTCTCCACGTAATCTTCTGCAGTTCAAACTTTGTGATGGCAACTGAAACCAAAACGGCG
ACTGAGGAAGTTAAGATTGACCTCTTTGAAGATGATGATGAGTTCGAAGAGTTTGAGATTAATGAAGAATGGGAAGTCAAAGAAGAAGGGAAGGAAATTACACAG
CAGTGGGAAGACGACTGGGATGACGATGATGTCAATGACGACTTCTCCTTGCAGCTTCGGAGAGAATTGGAGAGCAACACCGAGAAGAAATGAGAAGATTTTTTT
GTTGTCTTATCAGATAATTGGAAAATCGTCGAAACCTTTGGCACCGAAGAAAACAGTGTGTTCTTTTGTCGCTGTTGTCGTCGTCGTTGTCGTCACGGACCATGA
ATCCATCGAGATTATCAACATTGTGAGTAATAGATGTCCGAAATGTTGTTGGAATGTCAAAAATGTTTGAAAGAGTTGGTAGTTGTTGGAATGTTGACAAATTGC
CCGACTAGTCACTAGAGTAGGAGGAAGTTGGGTG
Protein sequenceShow/hide protein sequence
MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK