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CmoCh13G009490 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G009490
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGlycine-rich protein family
Genome locationCmo_Chr13:8266527..8269270
RNA-Seq ExpressionCmoCh13G009490
SyntenyCmoCh13G009490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBK6629703.1 enoyl-CoA hydratase/isomerase family protein [Betaproteobacteria bacterium]9.2e-0444.79Show/hide
Query:  GAVGRDGVAAVDGEGFVGGGPGGRGGLIMGGGPRGGPNGGLAINGTIIPGGSGSPGADNVGRISGGGGGGGNRDIPGGNTSVCKVGNNEGPGTGGLEGGG
        GA G  G  A  G G  GGG GG GG   GGG RGG   G    G    GG G  G    G   GGGGGGG     GG       G   G G GG  GGG
Subjt:  GAVGRDGVAAVDGEGFVGGGPGGRGGLIMGGGPRGGPNGGLAINGTIIPGGSGSPGADNVGRISGGGGGGGNRDIPGGNTSVCKVGNNEGPGTGGLEGGG

Query:  GGTRCIIVACCKDGGSKKGERPATCSLGGGPGGGGGNDGKPKFDATGIGGNGGGGGRRKESGRAGPLAESGKGGGGGGGGGGGGTAKGTSSG
        GG R       + GG   G  P     GGG G GGG  G  K    G GG GGGGG     G  G    +G GGGGGGGGGGGG   G  SG
Subjt:  GGTRCIIVACCKDGGSKKGERPATCSLGGGPGGGGGNDGKPKFDATGIGGNGGGGGRRKESGRAGPLAESGKGGGGGGGGGGGGTAKGTSSG
TrEMBL top hitse value%identityAlignment
R1D7J2 Uncharacterized protein9.9e-0441.45Show/hide
Query:  GRDGVAAVDGEGFVGGGPGGRGGLIMGGGPRGGPNGGLAINGTIIPGGSGSPGADNVGRISGGGGGGGNRDIPGGNTSVCKVGNNEGPGTGGLEGGGGGT
        G DG    +G G + GG GG GG + GGG  GG  GG  + G+    G G  G +  G   GGG GGG  D      + C  G   G G GG  GGGGG 
Subjt:  GRDGVAAVDGEGFVGGGPGGRGGLIMGGGPRGGPNGGLAINGTIIPGGSGSPGADNVGRISGGGGGGGNRDIPGGNTSVCKVGNNEGPGTGGLEGGGGGT

Query:  RCIIVACCKDGGSKKGERPATCSLGGGPGGGGGNDGKPKFDATGIGGNGGGGGRRKESGRAGPLAESGKGGGGGGGGGGGGTAKGTSSGSMFE
         C      +DGG + G        GGGPGGGG  +G       G GG GGGGG     G  G     G GGGGGGGGGGGG   G  +    E
Subjt:  RCIIVACCKDGGSKKGERPATCSLGGGPGGGGGNDGKPKFDATGIGGNGGGGGRRKESGRAGPLAESGKGGGGGGGGGGGGTAKGTSSGSMFE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36120.1 Glycine-rich protein family4.4e-0440.41Show/hide
Query:  GAVGRDGVAAVDGEGFVGGGPGGRGGLIMGGGPRGGPNGGLAINGTIIPGGSGSPGADNVGRISGGGGGGGNRDIPGGNTSVCKVGNNEGPGTGGLEGGG
        G  G  G A   GEG +GGG GG  G   GGG  GGP GG    G+   GG+G  G +  G   GGGGG G     GG       G  +G G GG  GGG
Subjt:  GAVGRDGVAAVDGEGFVGGGPGGRGGLIMGGGPRGGPNGGLAINGTIIPGGSGSPGADNVGRISGGGGGGGNRDIPGGNTSVCKVGNNEGPGTGGLEGGG

Query:  GGTRCIIVACCKDGGSKKGERPATCSLGGGPGGGGGNDGKPKFDATGIGGNGGGGGRRKESGRAGPLAESGKGGGGGGGGGGGGTAKGTSSGS
        G            GG   G        GGG  GGGG  G  +  A G G   GGG      G AG     G GGGGGG GGGGG   G ++ S
Subjt:  GGTRCIIVACCKDGGSKKGERPATCSLGGGPGGGGGNDGKPKFDATGIGGNGGGGGRRKESGRAGPLAESGKGGGGGGGGGGGGTAKGTSSGS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCCAAAAAGGCCATATATGAGTCGTCGATACTCTGTTTCTTTGGGGCTGATGACGAGCTAACCAACTCTGGCTTCCCTACAATAGGAGCTGTGGGCAGAGACGG
TGTTGCTGCAGTTGATGGAGAAGGCTTCGTGGGAGGAGGGCCAGGAGGAAGAGGTGGTCTCATCATGGGTGGAGGTCCAAGGGGAGGCCCAAATGGTGGCCTTGCCATCA
ACGGGACCATCATTCCAGGCGGAAGTGGGAGTCCAGGTGCAGATAATGTTGGCCGCATATCTGGTGGAGGTGGAGGTGGGGGAAATCGAGATATTCCAGGGGGTAATACA
TCAGTCTGCAAGGTTGGTAACAATGAAGGCCCAGGTACCGGAGGTCTTGAAGGTGGAGGTGGAGGAACAAGGTGCATCATAGTAGCCTGCTGCAAAGATGGAGGCAGCAA
AAAGGGAGAGCGACCTGCAACTTGTTCCCTTGGTGGAGGTCCAGGAGGTGGTGGAGGCAACGATGGTAAACCCAAGTTTGATGCTACAGGCATAGGCGGCAATGGAGGTG
GAGGAGGTAGACGTAAGGAATCAGGTAGAGCAGGACCATTAGCAGAGTCTGGCAAAGGAGGCGGAGGGGGAGGGGGAGGGGGAGGTGGAGGTACAGCCAAGGGAACATCC
TCTGGCTCCATGTTTGAGGATGATGCAACACCACTAGATTCGGATGATTTGCTCCCTCTTCCTCCTCTTCTGTTCGTCTTTTTGGAGGTCCTAAATGACTGGCCAAAAGA
CAGAATACAGAGCTTGATTATAAACCATGGTATATTTCCAAAAGTGAAAATGCATTTAACTACACGAAGAGTAATAGCACTAATGAGCAAGAGAGCCTTTGATACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTCCAAAAAGGCCATATATGAGTCGTCGATACTCTGTTTCTTTGGGGCTGATGACGAGCTAACCAACTCTGGCTTCCCTACAATAGGAGCTGTGGGCAGAGACGG
TGTTGCTGCAGTTGATGGAGAAGGCTTCGTGGGAGGAGGGCCAGGAGGAAGAGGTGGTCTCATCATGGGTGGAGGTCCAAGGGGAGGCCCAAATGGTGGCCTTGCCATCA
ACGGGACCATCATTCCAGGCGGAAGTGGGAGTCCAGGTGCAGATAATGTTGGCCGCATATCTGGTGGAGGTGGAGGTGGGGGAAATCGAGATATTCCAGGGGGTAATACA
TCAGTCTGCAAGGTTGGTAACAATGAAGGCCCAGGTACCGGAGGTCTTGAAGGTGGAGGTGGAGGAACAAGGTGCATCATAGTAGCCTGCTGCAAAGATGGAGGCAGCAA
AAAGGGAGAGCGACCTGCAACTTGTTCCCTTGGTGGAGGTCCAGGAGGTGGTGGAGGCAACGATGGTAAACCCAAGTTTGATGCTACAGGCATAGGCGGCAATGGAGGTG
GAGGAGGTAGACGTAAGGAATCAGGTAGAGCAGGACCATTAGCAGAGTCTGGCAAAGGAGGCGGAGGGGGAGGGGGAGGGGGAGGTGGAGGTACAGCCAAGGGAACATCC
TCTGGCTCCATGTTTGAGGATGATGCAACACCACTAGATTCGGATGATTTGCTCCCTCTTCCTCCTCTTCTGTTCGTCTTTTTGGAGGTCCTAAATGACTGGCCAAAAGA
CAGAATACAGAGCTTGATTATAAACCATGGTATATTTCCAAAAGTGAAAATGCATTTAACTACACGAAGAGTAATAGCACTAATGAGCAAGAGAGCCTTTGATACCTGA
Protein sequenceShow/hide protein sequence
MSSKKAIYESSILCFFGADDELTNSGFPTIGAVGRDGVAAVDGEGFVGGGPGGRGGLIMGGGPRGGPNGGLAINGTIIPGGSGSPGADNVGRISGGGGGGGNRDIPGGNT
SVCKVGNNEGPGTGGLEGGGGGTRCIIVACCKDGGSKKGERPATCSLGGGPGGGGGNDGKPKFDATGIGGNGGGGGRRKESGRAGPLAESGKGGGGGGGGGGGGTAKGTS
SGSMFEDDATPLDSDDLLPLPPLLFVFLEVLNDWPKDRIQSLIINHGIFPKVKMHLTTRRVIALMSKRAFDT