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CmoCh13G009580 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G009580
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein PXR1
Genome locationCmo_Chr13:8312000..8312302
RNA-Seq ExpressionCmoCh13G009580
SyntenyCmoCh13G009580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584261.1 hypothetical protein SDJN03_20193, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3093.14Show/hide
Query:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEE--DDHGKKKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQNA
        MGGTSEEKHEGKVEKKEKKKDKEKHEEEE  DDH KKKG  KDKDKE GEKKEKKKKDPADMKDPLKLRQKLEKLE KMQALAVKKEEILKLIHEAEQNA
Subjt:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEE--DDHGKKKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQNA

Query:  AP
        AP
Subjt:  AP
KAG7019857.1 hypothetical protein SDJN02_18822, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-3091.35Show/hide
Query:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEE----DDHGKKKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQ
        MGGTSEEKHEGKVEKKEKKKDKEKHEEEE    DDHGKKKG  KDKDKE  EKKEKKKKDPADMKDPLKLRQKLEKLE KMQALAVKKEEILKLIHEAEQ
Subjt:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEE----DDHGKKKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQ

Query:  NAAP
        NAAP
Subjt:  NAAP
XP_022923831.1 protein PXR1 [Cucurbita moschata]8.2e-37100Show/hide
Query:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEDDHGKKKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQNAAP
        MGGTSEEKHEGKVEKKEKKKDKEKHEEEEDDHGKKKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQNAAP
Subjt:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEDDHGKKKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQNAAP
XP_022994123.1 protein PXR1 [Cucurbita maxima]4.1e-2078Show/hide
Query:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEDDHGK-KKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQNAA
        MGG SEEKHE KVEKKEK     KHEEE D+  K KKGKDKDK+ + GEKKEKK KDPAD KDP KLRQKLEKLE KMQALAVKKEE+LKL+HEAEQNAA
Subjt:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEDDHGK-KKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQNAA
XP_023519141.1 protein PXR1 [Cucurbita pepo subsp. pepo]4.5e-3598Show/hide
Query:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEDDHGKKKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQNAAP
        MGGTSEEKHEGKVEKKEKKKDK KHEEEEDDHGKKKGKDKDKDKE GEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQNAAP
Subjt:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEDDHGKKKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQNAAP
TrEMBL top hitse value%identityAlignment
A0A0A0LQQ8 Uncharacterized protein4.6e-1770.59Show/hide
Query:  MGGTSEEKHEGKVEKKEK--KKDKEKHEEEEDDHGKKKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQNA
        MG TSEEKHEG+VEKKEK  KKDKEKH EE +D  KK             KK+KK+KDPAD KDP KLRQKLEKLE KMQALAVKKEEILKL+HEAEQN 
Subjt:  MGGTSEEKHEGKVEKKEK--KKDKEKHEEEEDDHGKKKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQNA

Query:  AP
         P
Subjt:  AP
A0A1S3AV24 protein PXR13.0e-1670Show/hide
Query:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEDDHGKKKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQNAAP
        MG TSEEKHEGKVEKKE KKDKEKH E ED+  KKK               KK+K+PAD KDP KLRQKLEKLE KMQALAVKKEEILKL+HEAEQN  P
Subjt:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEDDHGKKKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQNAAP
A0A6J1C8D9 nucleolar protein 581.4e-1367.65Show/hide
Query:  MGGTSEEKHEG-KVEKKEK--KKDKEKHEEEEDDHGKKKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQN
        MG  SEEKHEG +VEKKEK  KKDKEKHEE E   G+KK           EKKEKKKK+P D KDP KLRQKLEKLE KM+ LA+KKEE+LKL+ EAEQN
Subjt:  MGGTSEEKHEG-KVEKKEK--KKDKEKHEEEEDDHGKKKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQN

Query:  AA
        AA
Subjt:  AA
A0A6J1E7S6 protein PXR14.0e-37100Show/hide
Query:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEDDHGKKKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQNAAP
        MGGTSEEKHEGKVEKKEKKKDKEKHEEEEDDHGKKKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQNAAP
Subjt:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEDDHGKKKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQNAAP
A0A6J1K499 protein PXR12.0e-2078Show/hide
Query:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEDDHGK-KKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQNAA
        MGG SEEKHE KVEKKEK     KHEEE D+  K KKGKDKDK+ + GEKKEKK KDPAD KDP KLRQKLEKLE KMQALAVKKEE+LKL+HEAEQNAA
Subjt:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEDDHGK-KKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQNAA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G62750.1 unknown protein1.8e-1053.68Show/hide
Query:  EEKHE--GKVEKKEKKKDKEKHEEEEDDH--GKKKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQ
        EE+H    K EKKEKKKDK+K ++ EDD   G ++G+D++K  +  +KK KK+K+P D KDP KL+ KL+K+E+K+QA+ +KK+EI+KLIH+AEQ
Subjt:  EEKHE--GKVEKKEKKKDKEKHEEEEDDH--GKKKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGAACCTCGGAAGAGAAGCACGAGGGTAAGGTTGAGAAGAAGGAGAAGAAGAAAGATAAGGAGAAACATGAAGAAGAAGAAGATGATCATGGCAAAAAGAAGGG
AAAGGATAAGGATAAGGATAAGGAAGGAGGTGAAAAGAAAGAGAAGAAGAAAAAGGACCCTGCGGATATGAAGGATCCATTAAAGCTCAGACAGAAGCTTGAGAAGCTTG
AAGACAAGATGCAGGCTCTGGCGGTTAAGAAGGAAGAGATATTGAAACTGATCCATGAAGCTGAACAGAATGCTGCTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGAACCTCGGAAGAGAAGCACGAGGGTAAGGTTGAGAAGAAGGAGAAGAAGAAAGATAAGGAGAAACATGAAGAAGAAGAAGATGATCATGGCAAAAAGAAGGG
AAAGGATAAGGATAAGGATAAGGAAGGAGGTGAAAAGAAAGAGAAGAAGAAAAAGGACCCTGCGGATATGAAGGATCCATTAAAGCTCAGACAGAAGCTTGAGAAGCTTG
AAGACAAGATGCAGGCTCTGGCGGTTAAGAAGGAAGAGATATTGAAACTGATCCATGAAGCTGAACAGAATGCTGCTCCATGA
Protein sequenceShow/hide protein sequence
MGGTSEEKHEGKVEKKEKKKDKEKHEEEEDDHGKKKGKDKDKDKEGGEKKEKKKKDPADMKDPLKLRQKLEKLEDKMQALAVKKEEILKLIHEAEQNAAP