; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh13G009670 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G009670
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionglucuronoxylan 4-O-methyltransferase 1-like
Genome locationCmo_Chr13:8354979..8356377
RNA-Seq ExpressionCmoCh13G009670
SyntenyCmoCh13G009670
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0009834 - plant-type secondary cell wall biogenesis (biological process)
GO:0032259 - methylation (biological process)
GO:0045492 - xylan biosynthetic process (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0030775 - glucuronoxylan 4-O-methyltransferase activity (molecular function)
InterPro domainsIPR006514 - IRX15/IRX15L/IGXM
IPR021148 - Polysaccharide biosynthesis domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012196.1 Glucuronoxylan 4-O-methyltransferase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-2878.82Show/hide
Query:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYM
        P  +VCQLA KGLPEEVY+       VDAPTGYYD+APGRMT IYT GMMARNREEG ITD+FVHD NREVEDKFSMEFLCEGYM
Subjt:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYM

XP_022954973.1 glucuronoxylan 4-O-methyltransferase 1-like [Cucurbita moschata]1.5e-2878.82Show/hide
Query:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYM
        P  +VCQLA KGLPEEVY+       VDAPTGYYD+APGRMT IYT GMMARNREEG ITD+FVHD NREVEDKFSMEFLCEGYM
Subjt:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYM

XP_022994652.1 glucuronoxylan 4-O-methyltransferase 1-like [Cucurbita maxima]1.5e-2878.82Show/hide
Query:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYM
        P  +VCQLA KGLPEEVY+       VDAPTGYYD+APGRMT IYT GMMARNREEG ITD+FVHD NREVEDKFSMEFLCEGYM
Subjt:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYM

XP_023542198.1 glucuronoxylan 4-O-methyltransferase 1-like [Cucurbita pepo subsp. pepo]1.5e-2878.82Show/hide
Query:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYM
        P  +VCQLA KGLPEEVY+       VDAPTGYYD+APGRMT IYT GMMARNREEG ITD+FVHD NREVEDKFSMEFLCEGYM
Subjt:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYM

XP_038895348.1 glucuronoxylan 4-O-methyltransferase 1 [Benincasa hispida]3.9e-2981.18Show/hide
Query:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYM
        P  +VCQLALKGLPEEVYE       VDAPTGYY+EAPGRMT IYT GMMARNREEG  TDLFVHD NREVEDKFSMEFLCEGYM
Subjt:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYM

TrEMBL top hitse value%identityAlignment
A0A0A0LTA4 Polysacc_synt_4 domain-containing protein1.3e-2776.47Show/hide
Query:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYM
        P  +VC LA+KGLPEEVYE       VDAPTG++DEAPGRMT IYT GMMARNREEG  TD+FVHD NREVEDKFSMEFLCEGYM
Subjt:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYM

A0A1S3ATM9 glucuronoxylan 4-O-methyltransferase 11.3e-2776.47Show/hide
Query:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYM
        P  +VC LA+KGLPEEVYE       VDAPTG++DEAPGRMT IYT GMMARNREEG  TD+FVHD NREVEDKFSMEFLCEGYM
Subjt:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYM

A0A5D3BL62 Glucuronoxylan 4-O-methyltransferase 11.3e-2776.47Show/hide
Query:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYM
        P  +VC LA+KGLPEEVYE       VDAPTG++DEAPGRMT IYT GMMARNREEG  TD+FVHD NREVEDKFSMEFLCEGYM
Subjt:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYM

A0A6J1GSM4 glucuronoxylan 4-O-methyltransferase 1-like7.1e-2978.82Show/hide
Query:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYM
        P  +VCQLA KGLPEEVY+       VDAPTGYYD+APGRMT IYT GMMARNREEG ITD+FVHD NREVEDKFSMEFLCEGYM
Subjt:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYM

A0A6J1JWG6 glucuronoxylan 4-O-methyltransferase 1-like7.1e-2978.82Show/hide
Query:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYM
        P  +VCQLA KGLPEEVY+       VDAPTGYYD+APGRMT IYT GMMARNREEG ITD+FVHD NREVEDKFSMEFLCEGYM
Subjt:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYM

SwissProt top hitse value%identityAlignment
Q6NMK1 Glucuronoxylan 4-O-methyltransferase 11.2e-2870.93Show/hide
Query:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYME
        P  ++CQLALKGLP E+YE       VDAPTGYYDEAPGRMT IYT GMMARNR++G  TD+FVHD NRE+EDKFS  FLCEGYM+
Subjt:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYME

Q9C7F9 Probable methyltransferase At1g279302.3e-1651.9Show/hide
Query:  CQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGY
        C+LAL GLP+E Y+       VDAP GY+ EAPGRM  I++  +MARNR++  +T +F+HD NR VE  F+ EFLC  Y
Subjt:  CQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGY

Q9LQ32 Glucuronoxylan 4-O-methyltransferase 35.6e-2359.55Show/hide
Query:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYMEPSN
        P ++ C LALK  P + YE       VDAPTGY++EAPGRM+ IYT G++ARNRE+GE TD+FVHD NR VED+FS  FLC+GYM   N
Subjt:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYMEPSN

Q9SNE5 Protein IRREGULAR XYLEM 151.0e-0840.66Show/hide
Query:  CQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEG-EITDLFVHDANREVEDKFSMEFLCEGYMEPSNEV--HY
        C+L L  LP  VY+       VD P G   E PGRM+ I+T  ++AR+++ G   T +FVHD  R+VE     EFLC   +  SN++  HY
Subjt:  CQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEG-EITDLFVHDANREVEDKFSMEFLCEGYMEPSNEV--HY

Q9T0F7 Glucuronoxylan 4-O-methyltransferase 25.6e-2360.47Show/hide
Query:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYME
        P  + C L+LKG P +VYE       VDAPTGY+DEAPGRM+ IYT G++ARNR +G  TD+FVHD NR VED+FS+ FLC GYM+
Subjt:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYME

Arabidopsis top hitse value%identityAlignment
AT1G09610.1 Protein of unknown function (DUF579)8.3e-3070.93Show/hide
Query:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYME
        P  ++CQLALKGLP E+YE       VDAPTGYYDEAPGRMT IYT GMMARNR++G  TD+FVHD NRE+EDKFS  FLCEGYM+
Subjt:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYME

AT1G33800.1 Protein of unknown function (DUF579)4.0e-2459.55Show/hide
Query:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYMEPSN
        P ++ C LALK  P + YE       VDAPTGY++EAPGRM+ IYT G++ARNRE+GE TD+FVHD NR VED+FS  FLC+GYM   N
Subjt:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYMEPSN

AT1G67330.1 Protein of unknown function (DUF579)9.5e-1849.43Show/hide
Query:  FPTPLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGY
        FP   +  C LAL  LP+E Y+       VDAP GY+ EAPGRM  I+++ +MARNR+    T +F+HD NR+VE+ F+ EFLCE Y
Subjt:  FPTPLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGY

AT1G71690.1 Protein of unknown function (DUF579)9.9e-2362.65Show/hide
Query:  TVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNR-EEGEITDLFVHDANREVEDKFSMEFLCEGYM
        + C+LALKGLPE VYE       VDAPTG+++EAPGRM+ IYT GM+AR R +E E T +FVHD +R+VED+FSMEFLC  YM
Subjt:  TVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNR-EEGEITDLFVHDANREVEDKFSMEFLCEGYM

AT4G09990.1 Protein of unknown function (DUF579)4.0e-2460.47Show/hide
Query:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYME
        P  + C L+LKG P +VYE       VDAPTGY+DEAPGRM+ IYT G++ARNR +G  TD+FVHD NR VED+FS+ FLC GYM+
Subjt:  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYME


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAACATCTTTGACTCACCCACACAAAACCCATCTTCAAAGTTGCAATCTTTTTCACCAAAAACCACAAAAAATTGCTCCCCATCTTCTTTCAACAACATCCCTTGC
TCATTTTCCCACGCCCTTATCCACGGTGTGTCAGTTGGCGCTTAAGGGACTGCCAGAGGAAGTGTATGAGGTGGATGCACCGACAGGGTACTACGACGAGGCACCAGGGA
GGATGACGGTGATTTATACGACGGGGATGATGGCGAGGAATAGGGAGGAAGGGGAAATTACGGACTTGTTTGTGCATGATGCGAATAGGGAAGTGGAAGATAAGTTTTCG
ATGGAGTTCTTGTGTGAAGGTTATATGGAGCCTTCGAACGAAGTACATTATAGAGCCTCTCCTAAGATCTATGGAGCCCTCGAACAATCTTCCGTTAATCGAGGCTCAAC
TCCTTCTCTAGAGCCCTTGAACAAAGTACCCCTTTGTTTAACACTTAAGTCACTTTTAACTACACCTTCGAGTCTCACTTCTTTGTTCAAATTGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAACATCTTTGACTCACCCACACAAAACCCATCTTCAAAGTTGCAATCTTTTTCACCAAAAACCACAAAAAATTGCTCCCCATCTTCTTTCAACAACATCCCTTGC
TCATTTTCCCACGCCCTTATCCACGGTGTGTCAGTTGGCGCTTAAGGGACTGCCAGAGGAAGTGTATGAGGTGGATGCACCGACAGGGTACTACGACGAGGCACCAGGGA
GGATGACGGTGATTTATACGACGGGGATGATGGCGAGGAATAGGGAGGAAGGGGAAATTACGGACTTGTTTGTGCATGATGCGAATAGGGAAGTGGAAGATAAGTTTTCG
ATGGAGTTCTTGTGTGAAGGTTATATGGAGCCTTCGAACGAAGTACATTATAGAGCCTCTCCTAAGATCTATGGAGCCCTCGAACAATCTTCCGTTAATCGAGGCTCAAC
TCCTTCTCTAGAGCCCTTGAACAAAGTACCCCTTTGTTTAACACTTAAGTCACTTTTAACTACACCTTCGAGTCTCACTTCTTTGTTCAAATTGAGATAG
Protein sequenceShow/hide protein sequence
MLTSLTHPHKTHLQSCNLFHQKPQKIAPHLLSTTSLAHFPTPLSTVCQLALKGLPEEVYEVDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFS
MEFLCEGYMEPSNEVHYRASPKIYGALEQSSVNRGSTPSLEPLNKVPLCLTLKSLLTTPSSLTSLFKLR