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CmoCh13G009850 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G009850
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPlant invertase/pectin methylesterase inhibitor superfamily
Genome locationCmo_Chr13:8416997..8417949
RNA-Seq ExpressionCmoCh13G009850
SyntenyCmoCh13G009850
Gene Ontology termsGO:0042545 - cell wall modification (biological process)
GO:0045490 - pectin catabolic process (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030599 - pectinesterase activity (molecular function)
GO:0045330 - aspartyl esterase activity (molecular function)
InterPro domainsIPR000070 - Pectinesterase, catalytic
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055287.1 putative pectinesterase/pectinesterase inhibitor 41 [Cucumis melo var. makuwa]5.1e-2561.86Show/hide
Query:  NNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARLLNNTVTVTAQSK
        +NFIA S+TF NS  AGP++GQAVA+L+   +T +HKC FLG+QDTL++ GK  FFK+ ++Y TVDFIFGN L++FQDC IYAR  N  +TVTAQSK
Subjt:  NNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARLLNNTVTVTAQSK

KAG6584281.1 putative pectinesterase/pectinesterase inhibitor 39, partial [Cucurbita argyrosperma subsp. sororia]2.8e-3986.41Show/hide
Query:  VTCANNFIAISITFSNSSLAGPKHGQAVALL--NNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARLLNNTVTVTA
        V  AN+F+A+SITFSNS+ AGPKHGQAVALL  NN NYTVF+KCVFLGYQDTLFINGKMLFFKD EIY TVDFIFGNAL VFQDCRIYARLLNNTVTVTA
Subjt:  VTCANNFIAISITFSNSSLAGPKHGQAVALL--NNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARLLNNTVTVTA

Query:  QSK
        QSK
Subjt:  QSK

KAG6584282.1 putative pectinesterase/pectinesterase inhibitor 39, partial [Cucurbita argyrosperma subsp. sororia]2.1e-3986.41Show/hide
Query:  VTCANNFIAISITFSNSSLAGPKHGQAVALL--NNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARLLNNTVTVTA
        V  AN+F+A+SITFSNS+ AGP HGQAVALL  NNVNYTVF+KCVFLGYQDTLFINGKMLFFKD EIY TVDFIFGNAL VFQDCRIYARLLNNTVTVTA
Subjt:  VTCANNFIAISITFSNSSLAGPKHGQAVALL--NNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARLLNNTVTVTA

Query:  QSK
        QSK
Subjt:  QSK

KAG7019877.1 putative pectinesterase/pectinesterase inhibitor 39, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-4087.38Show/hide
Query:  VTCANNFIAISITFSNSSLAGPKHGQAVALL--NNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARLLNNTVTVTA
        V  AN+F+A+SITFSNS+ AGPKHGQAVALL  NNVNYTVF+KCVFLGYQDTLFINGKMLFFKD EIY TVDFIFGNAL VFQDCRIYARLLNNTVTVTA
Subjt:  VTCANNFIAISITFSNSSLAGPKHGQAVALL--NNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARLLNNTVTVTA

Query:  QSK
        QSK
Subjt:  QSK

XP_022143502.1 pectinesterase-like [Momordica charantia]1.3e-2872.45Show/hide
Query:  NNFIAISITFSNSSLAGPKHGQAVALLNN-VNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARLLNNTVTVTAQSK
        NNF+A SITF NS  AGP +GQAVALLN+  NY  F++CVFLGYQDT+FING  LFFKD EI  TVDFIFG+ L+VFQDC+IYAR  NNT+TVTAQSK
Subjt:  NNFIAISITFSNSSLAGPKHGQAVALLNN-VNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARLLNNTVTVTAQSK

TrEMBL top hitse value%identityAlignment
A0A5A7UNS3 Pectinesterase6.1e-2458.76Show/hide
Query:  NNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARLLNNTVTVTAQSK
        NNF+A S+TF NS  AGP++GQAVA+ +  ++T ++KC FLG+QDTL++NGK  FFK+  IY +VDFIFG+   +FQDC IYAR+ +N++TVTAQSK
Subjt:  NNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARLLNNTVTVTAQSK

A0A5D3BHF7 Pectinesterase2.5e-2561.86Show/hide
Query:  NNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARLLNNTVTVTAQSK
        +NFIA S+TF NS  AGP++GQAVA+L+   +T +HKC FLG+QDTL++ GK  FFK+ ++Y TVDFIFGN L++FQDC IYAR  N  +TVTAQSK
Subjt:  NNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARLLNNTVTVTAQSK

A0A5D3BKF8 Pectinesterase6.1e-2461.86Show/hide
Query:  NNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARLLNNTVTVTAQSK
        NNF+A S+TF NS  AGP++GQAVA+L+  ++T +HKC FLG+QDTL++ G   FFK+ EIY +VDFIFGN L +FQDC IYAR  N  +TVTAQSK
Subjt:  NNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARLLNNTVTVTAQSK

A0A5D3BM28 Pectinesterase6.1e-2458.76Show/hide
Query:  NNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARLLNNTVTVTAQSK
        NNF+A S+TF NS  AGP++GQAVA+ +  ++T ++KC FLG+QDTL++NGK  FFK+  IY +VDFIFG+   +FQDC IYAR+ +N++TVTAQSK
Subjt:  NNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARLLNNTVTVTAQSK

A0A6J1CR03 Pectinesterase6.3e-2972.45Show/hide
Query:  NNFIAISITFSNSSLAGPKHGQAVALLNN-VNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARLLNNTVTVTAQSK
        NNF+A SITF NS  AGP +GQAVALLN+  NY  F++CVFLGYQDT+FING  LFFKD EI  TVDFIFG+ L+VFQDC+IYAR  NNT+TVTAQSK
Subjt:  NNFIAISITFSNSSLAGPKHGQAVALLNN-VNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARLLNNTVTVTAQSK

SwissProt top hitse value%identityAlignment
O04887 Pectinesterase 26.2e-1847.57Show/hide
Query:  IVTCANNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARL-LNNTVTVTA
        +    +NFIA  IT  N+  AGP + QAVAL +  + +VF++C F GYQDTL+++ +  F+++ +IY TVDFIFGNA  V Q+C I+AR   N T T+TA
Subjt:  IVTCANNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARL-LNNTVTVTA

Query:  QSK
        Q +
Subjt:  QSK

O49298 Probable pectinesterase/pectinesterase inhibitor 61.1e-1748.48Show/hide
Query:  NNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYAR--LLNNTVTVTAQSK
        N FIA  ITF N+  AGP+  QAVAL ++ +++VF+ C F GYQDTL+++    F ++  IY TVDFIFG+A ++ Q+C IYAR  +     T+TAQS+
Subjt:  NNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYAR--LLNNTVTVTAQSK

O81320 Putative pectinesterase/pectinesterase inhibitor 381.3e-1844.72Show/hide
Query:  RSKGFSLSPFRLRLIVAGDVIVTCANNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSV
        +SKG   S ++    VA        + F+   IT  N+  AGP++ QAVAL +N + +VF++C   GYQDTL+++    FF++ +IY TVDFIFGNA +V
Subjt:  RSKGFSLSPFRLRLIVAGDVIVTCANNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSV

Query:  FQDCRIYARLLNNTV-TVTAQSK
         Q+CRI+AR   N V T+TAQS+
Subjt:  FQDCRIYARLLNNTV-TVTAQSK

Q94CB1 Probable pectinesterase/pectinesterase inhibitor 256.2e-1852.44Show/hide
Query:  FIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYAR
        F+A+ +TF N+  AGP+  QAVAL NN   + F++C F GYQDTL+++    F+++ +IY TVDFIFGNA ++FQ+C IYAR
Subjt:  FIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYAR

Q9FF77 Probable pectinesterase/pectinesterase inhibitor 471.3e-1845.45Show/hide
Query:  NNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYAR--LLNNTVTVTAQSK
        + F+A+ +TF N+  AGP+  QAVA+ NN + + F++C F GYQDTL+++    F+++ +IY T+DFIFGNA ++FQ+C IYAR  + N    VTA  +
Subjt:  NNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYAR--LLNNTVTVTAQSK

Arabidopsis top hitse value%identityAlignment
AT1G23200.1 Plant invertase/pectin methylesterase inhibitor superfamily7.6e-1948.48Show/hide
Query:  NNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYAR--LLNNTVTVTAQSK
        N FIA  ITF N+  AGP+  QAVAL ++ +++VF+ C F GYQDTL+++    F ++  IY TVDFIFG+A ++ Q+C IYAR  +     T+TAQS+
Subjt:  NNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYAR--LLNNTVTVTAQSK

AT3G10720.1 Plant invertase/pectin methylesterase inhibitor superfamily4.4e-1952.44Show/hide
Query:  FIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYAR
        F+A+ +TF N+  AGP+  QAVAL NN   + F++C F GYQDTL+++    F+++ +IY TVDFIFGNA ++FQ+C IYAR
Subjt:  FIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYAR

AT3G10720.2 Plant invertase/pectin methylesterase inhibitor superfamily4.4e-1952.44Show/hide
Query:  FIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYAR
        F+A+ +TF N+  AGP+  QAVAL NN   + F++C F GYQDTL+++    F+++ +IY TVDFIFGNA ++FQ+C IYAR
Subjt:  FIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYAR

AT4G00190.1 pectin methylesterase 388.9e-2044.72Show/hide
Query:  RSKGFSLSPFRLRLIVAGDVIVTCANNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSV
        +SKG   S ++    VA        + F+   IT  N+  AGP++ QAVAL +N + +VF++C   GYQDTL+++    FF++ +IY TVDFIFGNA +V
Subjt:  RSKGFSLSPFRLRLIVAGDVIVTCANNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSV

Query:  FQDCRIYARLLNNTV-TVTAQSK
         Q+CRI+AR   N V T+TAQS+
Subjt:  FQDCRIYARLLNNTV-TVTAQSK

AT5G04970.1 Plant invertase/pectin methylesterase inhibitor superfamily8.9e-2045.45Show/hide
Query:  NNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYAR--LLNNTVTVTAQSK
        + F+A+ +TF N+  AGP+  QAVA+ NN + + F++C F GYQDTL+++    F+++ +IY T+DFIFGNA ++FQ+C IYAR  + N    VTA  +
Subjt:  NNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQDTLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYAR--LLNNTVTVTAQSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGAAGGTCTCTGTTTTGTCGGCGTTTATGTCTGGCGAGGTTCCTATCTTTGAGGTTCGTTCGTCTTCCCCTCTTTTCTCTCTTCATGTCGTGTTCCTATCTTTG
AGGTCTAAGGGTTTCAGCCTATCACCATTTCGTTTGAGGCTGATAGTCGCCGGAGATGTAATAGTGACATGTGCGAACAACTTCATAGCTATTTCTATTACATTT
TCAAATTCTTCTCTGGCTGGACCTAAACACGGCCAAGCAGTTGCTCTTCTGAATAATGTAAATTATACCGTATTTCATAAGTGCGTTTTTCTTGGGTATCAAGAC
ACACTTTTCATAAATGGAAAGATGTTGTTTTTCAAAGATTTTGAAATCTACCGTACAGTGGATTTCATATTTGGAAACGCACTTTCTGTTTTTCAAGATTGTAGG
ATTTACGCCCGACTACTAAATAACACTGTTACTGTCACTGCACAATCTAAATGA
mRNA sequenceShow/hide mRNA sequence
TTGAAGGTCTCTGTTTTGTCGGCGTTTATGTCTGGCGAGGTTCCTATCTTTGAGGTTCGTTCGTCTTCCCCTCTTTTCTCTCTTCATGTCGTGTTCCTATCTTTG
AGGTCTAAGGGTTTCAGCCTATCACCATTTCGTTTGAGGCTGATAGTCGCCGGAGATGTAATAGTGACATGTGCGAACAACTTCATAGCTATTTCTATTACATTT
TCAAATTCTTCTCTGGCTGGACCTAAACACGGCCAAGCAGTTGCTCTTCTGAATAATGTAAATTATACCGTATTTCATAAGTGCGTTTTTCTTGGGTATCAAGAC
ACACTTTTCATAAATGGAAAGATGTTGTTTTTCAAAGATTTTGAAATCTACCGTACAGTGGATTTCATATTTGGAAACGCACTTTCTGTTTTTCAAGATTGTAGG
ATTTACGCCCGACTACTAAATAACACTGTTACTGTCACTGCACAATCTAAATGA
Protein sequenceShow/hide protein sequence
LKVSVLSAFMSGEVPIFEVRSSSPLFSLHVVFLSLRSKGFSLSPFRLRLIVAGDVIVTCANNFIAISITFSNSSLAGPKHGQAVALLNNVNYTVFHKCVFLGYQD
TLFINGKMLFFKDFEIYRTVDFIFGNALSVFQDCRIYARLLNNTVTVTAQSK