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CmoCh13G009880 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G009880
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPectinesterase
Genome locationCmo_Chr13:8447666..8448060
RNA-Seq ExpressionCmoCh13G009880
SyntenyCmoCh13G009880
Gene Ontology termsGO:0042545 - cell wall modification (biological process)
GO:0045490 - pectin catabolic process (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0030599 - pectinesterase activity (molecular function)
GO:0045330 - aspartyl esterase activity (molecular function)
InterPro domainsIPR000070 - Pectinesterase, catalytic
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584281.1 putative pectinesterase/pectinesterase inhibitor 39, partial [Cucurbita argyrosperma subsp. sororia]2.4e-4897.17Show/hide
Query:  MSCFFILFFVTFFCTTSSCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSD
        MSCFFILFFVTFFCTTSSCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGT+D
Subjt:  MSCFFILFFVTFFCTTSSCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSD

Query:  SATFEI
        SATF +
Subjt:  SATFEI

KAG6584282.1 putative pectinesterase/pectinesterase inhibitor 39, partial [Cucurbita argyrosperma subsp. sororia]5.3e-4896.23Show/hide
Query:  MSCFFILFFVTFFCTTSSCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSD
        MSCFFILFFVTFFCTTSSCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYI+IESSKTFITLKGDDASTTTIVGNRSQATGFGT+D
Subjt:  MSCFFILFFVTFFCTTSSCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSD

Query:  SATFEI
        SATF +
Subjt:  SATFEI

KAG6584284.1 putative pectinesterase/pectinesterase inhibitor 42, partial [Cucurbita argyrosperma subsp. sororia]9.1e-4898.08Show/hide
Query:  MSCFFILFFVTFFCTTSSCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSD
        MSCFFILFFVTFFCTTSSCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDD STTTIVGNRSQATGFGT+D
Subjt:  MSCFFILFFVTFFCTTSSCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSD

Query:  SATF
        SATF
Subjt:  SATF

KAG7019877.1 putative pectinesterase/pectinesterase inhibitor 39, partial [Cucurbita argyrosperma subsp. argyrosperma]5.9e-3196Show/hide
Query:  GDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSATFEI
        GDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGT+DSATF +
Subjt:  GDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSATFEI

XP_022923776.1 pectinesterase-like [Cucurbita moschata]1.1e-4898.11Show/hide
Query:  MSCFFILFFVTFFCTTSSCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSD
        MSCFFILFFVTFFCTTSSCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSD
Subjt:  MSCFFILFFVTFFCTTSSCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSD

Query:  SATFEI
        SATF +
Subjt:  SATFEI

TrEMBL top hitse value%identityAlignment
A0A6J1C9Z6 Pectinesterase3.6e-1854.21Show/hide
Query:  MSCFFILFFVTFFCTTSSCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSD
        ++ F  L  + FF        +NATVSLDG GDY TI  AIAAAP+NS +RF IHV  G Y E+++I S+KTF+ L GDDASTT IV NRS   GF T  
Subjt:  MSCFFILFFVTFFCTTSSCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSD

Query:  SATFEIE
        SATF ++
Subjt:  SATFEIE

A0A6J1CR03 Pectinesterase1.1e-2266.67Show/hide
Query:  ISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSATFEI
        I +NATVSLDG GD+ +IGAAI+AAP+NS+SRF I +K G Y E+I++ES KTFITL GD+A+TT IV NRS  TGFGTS SATF +
Subjt:  ISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSATFEI

A0A6J1D381 Pectinesterase1.5e-1955.77Show/hide
Query:  FILFFVTFFCTTSSC-ISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSAT
        +++F +      S C I++NATVSLDG GDY  I  AIAAAPNN   RF IHVKPG+Y E+I++   KTFI+L GDDASTT IV +RS   GF T+ SAT
Subjt:  FILFFVTFFCTTSSC-ISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSAT

Query:  FEIE
        F ++
Subjt:  FEIE

A0A6J1E7N2 Pectinesterase5.2e-4998.11Show/hide
Query:  MSCFFILFFVTFFCTTSSCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSD
        MSCFFILFFVTFFCTTSSCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSD
Subjt:  MSCFFILFFVTFFCTTSSCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSD

Query:  SATFEI
        SATF +
Subjt:  SATFEI

A0A6J1KPG6 Pectinesterase1.6e-1853.4Show/hide
Query:  FFILFFVTFFCTTSSCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSAT
        F +   +  F   SS   +N+TVSLDG G++  I  AI AAPN + +RF IH+KPG+Y E+I+I S KTFI+L GD+ASTT IV NRS+ATGF T++SAT
Subjt:  FFILFFVTFFCTTSSCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSAT

Query:  FEI
          +
Subjt:  FEI

SwissProt top hitse value%identityAlignment
O81301 Probable pectinesterase/pectinesterase inhibitor 401.2e-1350.62Show/hide
Query:  NATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSAT
        N  V+ +G G+YTTIG AI+AAPN+S++RF+I++K G YFE I+I   KT I   GD    T I  NRS A G+    SAT
Subjt:  NATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSAT

O81415 Probable pectinesterase/pectinesterase inhibitor 392.0e-1342.53Show/hide
Query:  SYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSATFEIE
        +YN +V++DG G++TTI  A+ AAPN S++RFII++K G YFE +++   KT I   GD    T I  NRS+  G+ T  + T  ++
Subjt:  SYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSATFEIE

P85076 Pectinesterase3.4e-1342.86Show/hide
Query:  NATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSATFEI
        +  V+ DG G++TT+GAA+AAA ++S +RF+I++K G YFEY+ ++  KT +   GD    T I GNRS   G+ T  S+T  +
Subjt:  NATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSATFEI

Q42534 Pectinesterase 21.5e-1346.51Show/hide
Query:  SCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSAT
        S I  +ATV+ DG GD+TT+ AA+AAAP  S+ RF+IH+K G+Y E +++   KT I   GD    T I G+R+   G  T  SAT
Subjt:  SCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSAT

Q9SRX4 Probable pectinesterase/pectinesterase inhibitor 72.0e-1346.67Show/hide
Query:  ISYNATVSLDGKGDYTTIGAAIAAAPNNSDSR---FIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSATFEI
        IS   TVS DG G++T I AA+AAAPNN+D     F+I+V  G+Y EYI I  +K ++ + GD  + T + GNRS   G+ T +SATF +
Subjt:  ISYNATVSLDGKGDYTTIGAAIAAAPNNSDSR---FIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSATFEI

Arabidopsis top hitse value%identityAlignment
AT1G02810.1 Plant invertase/pectin methylesterase inhibitor superfamily1.4e-1446.67Show/hide
Query:  ISYNATVSLDGKGDYTTIGAAIAAAPNNSDSR---FIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSATFEI
        IS   TVS DG G++T I AA+AAAPNN+D     F+I+V  G+Y EYI I  +K ++ + GD  + T + GNRS   G+ T +SATF +
Subjt:  ISYNATVSLDGKGDYTTIGAAIAAAPNNSDSR---FIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSATFEI

AT1G53830.1 pectin methylesterase 21.1e-1446.51Show/hide
Query:  SCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSAT
        S I  +ATV+ DG GD+TT+ AA+AAAP  S+ RF+IH+K G+Y E +++   KT I   GD    T I G+R+   G  T  SAT
Subjt:  SCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSAT

AT2G26450.1 Plant invertase/pectin methylesterase inhibitor superfamily7.0e-1443.9Show/hide
Query:  NATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSATF
        NATV+ DG GD+TTI  A+ A P   + R+II+VK G+Y EY+ ++  K  +T+ GD +  T + GN+S A    T  +ATF
Subjt:  NATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSATF

AT4G02300.1 Plant invertase/pectin methylesterase inhibitor superfamily1.4e-1442.53Show/hide
Query:  SYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSATFEIE
        +YN +V++DG G++TTI  A+ AAPN S++RFII++K G YFE +++   KT I   GD    T I  NRS+  G+ T  + T  ++
Subjt:  SYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSATFEIE

AT4G02320.1 Plant invertase/pectin methylesterase inhibitor superfamily8.3e-1550.62Show/hide
Query:  NATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSAT
        N  V+ +G G+YTTIG AI+AAPN+S++RF+I++K G YFE I+I   KT I   GD    T I  NRS A G+    SAT
Subjt:  NATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTGCTTTTTCATCCTCTTCTTTGTTACATTTTTCTGTACTACATCCTCCTGCATTTCTTATAATGCAACCGTCTCATTGGACGGGAAGGGAGATTATACAACAAT
CGGTGCCGCTATAGCAGCGGCACCGAATAACAGTGACTCCAGGTTTATCATTCATGTTAAACCTGGAATGTATTTTGAATATATAAAAATCGAATCGTCGAAAACCTTCA
TTACATTAAAGGGCGACGATGCGTCTACCACAACTATAGTGGGTAACAGGAGCCAGGCCACTGGCTTTGGAACTTCGGATTCAGCCACATTCGAGATAGAAAAGTGTTTG
ACCATTTTTTTAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTGCTTTTTCATCCTCTTCTTTGTTACATTTTTCTGTACTACATCCTCCTGCATTTCTTATAATGCAACCGTCTCATTGGACGGGAAGGGAGATTATACAACAAT
CGGTGCCGCTATAGCAGCGGCACCGAATAACAGTGACTCCAGGTTTATCATTCATGTTAAACCTGGAATGTATTTTGAATATATAAAAATCGAATCGTCGAAAACCTTCA
TTACATTAAAGGGCGACGATGCGTCTACCACAACTATAGTGGGTAACAGGAGCCAGGCCACTGGCTTTGGAACTTCGGATTCAGCCACATTCGAGATAGAAAAGTGTTTG
ACCATTTTTTTAAATTAG
Protein sequenceShow/hide protein sequence
MSCFFILFFVTFFCTTSSCISYNATVSLDGKGDYTTIGAAIAAAPNNSDSRFIIHVKPGMYFEYIKIESSKTFITLKGDDASTTTIVGNRSQATGFGTSDSATFEIEKCL
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