CuGenDBv2

Gene ID	CmoCh13G009940
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	DNA-binding protein RHL1-like
Genome location	Cmo_Chr13:8500502..8507472
RNA-Seq Expression	CmoCh13G009940
Synteny	CmoCh13G009940
Gene Ontology terms	GO:0042023 - DNA endoreduplication (biological process) GO:0003677 - DNA binding (molecular function)
InterPro domains	IPR038859 - DNA-binding protein RHL1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7019884.1 DNA-binding protein RHL1, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-226

96.3

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Query:  MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
        MARGSSSSKRDEAKGEM+PEIAARKRLKKLAF NNILSETQAKPQAY SPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
Subjt:  MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI
        LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPK+MTMG+CGEYDFNGGAGVASTSKQSVQKKGI
Subjt:  LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI

Query:  NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEK--------TEVVSVDSE
        NRAEE SLK EHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASE         TEVVSVDSE
Subjt:  NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEK--------TEVVSVDSE

Query:  DKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDG
        DKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDG
Subjt:  DKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDG

Query:  GKFRRKDTEYEDEDDIEELSSSQEDTDEDWTS
        GKFRRKDTEYEDEDDIEELSSSQEDTDEDWTS
Subjt:  GKFRRKDTEYEDEDDIEELSSSQEDTDEDWTS

XP_008467323.1 PREDICTED: DNA-binding protein RHL1 isoform X2 [Cucumis melo]

7.9e-190

84.24

Show/hide

Query:  MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
        MARGSSSSK+DEAKGE+ PEI  RKRLKKLAF+NNILSETQAKPQAY SPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL TKNP+
Subjt:  MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI
        LYLDFPQGR+KLFGTI+YPKNRYLTLQFS+GGKNV CEDCFDNMIVFSDAWWIGTKDENPEE  LDFPKE+T+G+CGEYDFNGGAGV STSKQSVQKKGI
Subjt:  LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI

Query:  NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVE-R
        N A E S KGEHGDDLV LE ++TNS+KT PVRHSERSA KVFNFA+A S++ES GT  D SEGEEKNIVIHEPSIGDHASEKTE +SV+S D+DAVE +
Subjt:  NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVE-R

Query:  PRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKD
        P FLEGN+T ISK K  SRAKG+AQS  RG LVQPTL SLFKKVEEKRTPRSSKRSS PKVS QKMQLSGSKQKIDQDEG KKRR V+GQ  GGK +RKD
Subjt:  PRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKD

Query:  TEYEDEDDIEELSSSQEDTDEDWTS
        TEYE ED+IEELSSSQEDTDEDWTS
Subjt:  TEYEDEDDIEELSSSQEDTDEDWTS

XP_022924051.1 DNA-binding protein RHL1-like [Cucurbita moschata]

6.8e-234

100

Show/hide

Query:  MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
        MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
Subjt:  MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI
        LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI
Subjt:  LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI

Query:  NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVERP
        NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVERP
Subjt:  NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVERP

Query:  RFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDT
        RFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDT
Subjt:  RFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDT

Query:  EYEDEDDIEELSSSQEDTDEDWTS
        EYEDEDDIEELSSSQEDTDEDWTS
Subjt:  EYEDEDDIEELSSSQEDTDEDWTS

XP_023001787.1 DNA-binding protein RHL1-like [Cucurbita maxima]

3.4e-225

97.17

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Query:  MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
        MARGSSSSKRDEAKGEM+PEIAARKRLKKLAFTNNILSETQAKPQAY SPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
Subjt:  MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI
        LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI
Subjt:  LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI

Query:  NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVERP
        +RAEE SLK EHGDDLVDLEDNMTNSMKTTPVRHSERS GKVFNFAQAFSKEESAGT ADFSEGEEKNIVI+EPSIGDHASEKTEVVSVDSEDKDAVERP
Subjt:  NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVERP

Query:  RFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDT
        RFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQK QLSGSKQKIDQDEGLKKR VVQGQDDGGKF RKDT
Subjt:  RFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDT

Query:  EYEDEDDIEELSSSQEDTDEDWTS
        EYEDEDDIEEL SSQEDTDEDWTS
Subjt:  EYEDEDDIEELSSSQEDTDEDWTS

XP_023519239.1 DNA-binding protein RHL1-like [Cucurbita pepo subsp. pepo]

1.1e-228

98.11

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Query:  MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
        MARGSSSSKRDEAKG M+PEIAARKRLKKLAFTNNILSETQAKPQAY SPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
Subjt:  MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI
        LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMG+CGEYDFNGGAGVASTSKQSVQKKGI
Subjt:  LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI

Query:  NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVERP
        NRAEE SLK EHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVERP
Subjt:  NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVERP

Query:  RFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDT
        RFLEGN+TPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGK RRKDT
Subjt:  RFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDT

Query:  EYEDEDDIEELSSSQEDTDEDWTS
        EYEDEDDIEELSSSQEDTDEDWTS
Subjt:  EYEDEDDIEELSSSQEDTDEDWTS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CTA5 DNA-binding protein RHL1 isoform X2

3.8e-190

84.24

Show/hide

Query:  MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
        MARGSSSSK+DEAKGE+ PEI  RKRLKKLAF+NNILSETQAKPQAY SPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL TKNP+
Subjt:  MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI
        LYLDFPQGR+KLFGTI+YPKNRYLTLQFS+GGKNV CEDCFDNMIVFSDAWWIGTKDENPEE  LDFPKE+T+G+CGEYDFNGGAGV STSKQSVQKKGI
Subjt:  LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI

Query:  NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVE-R
        N A E S KGEHGDDLV LE ++TNS+KT PVRHSERSA KVFNFA+A S++ES GT  D SEGEEKNIVIHEPSIGDHASEKTE +SV+S D+DAVE +
Subjt:  NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVE-R

Query:  PRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKD
        P FLEGN+T ISK K  SRAKG+AQS  RG LVQPTL SLFKKVEEKRTPRSSKRSS PKVS QKMQLSGSKQKIDQDEG KKRR V+GQ  GGK +RKD
Subjt:  PRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKD

Query:  TEYEDEDDIEELSSSQEDTDEDWTS
        TEYE ED+IEELSSSQEDTDEDWTS
Subjt:  TEYEDEDDIEELSSSQEDTDEDWTS

A0A6J1C822 DNA-binding protein RHL1

3.2e-189

82.35

Show/hide

Query:  MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
        MARGSSSSKR+   GE++PE A RKRLKKLAF+NN+LS+TQAKPQAY SPSATVLKHHGKDIVKKSQRKNRFLFSFSGLL PVSGGKIGELKDLGTKNPI
Subjt:  MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI
        LYLDFPQGR+KLFGTI+YPKNRYLTLQFSRGGKNV CED FD+M+VFSDAWWIGTKDENPEE RLD PKE+T GKCGEYDFNGGAGV STSK SVQKKGI
Subjt:  LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI

Query:  NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVERP
        N AEE S KGE GD L DLEDNM NS+ TTPVRHSERSAGKVF FA+A S++ES G+Y D SEGEEKNIVIHEPSIGDHASEKTE +SVD++D+D + RP
Subjt:  NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVERP

Query:  RFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDT
         FLEGN+  ISK K  SRAKGN +S NRGL VQ TLPSLFKKVEEKRTPRSSKRSS PKVSA+KMQLSGSK+KI+QDEG KKRR V+GQDDGGK  RKD 
Subjt:  RFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDT

Query:  EYEDEDDIEELSSSQ-EDTDEDWTS
        EYE EDDIEELSSSQ EDTDEDWTS
Subjt:  EYEDEDDIEELSSSQ-EDTDEDWTS

A0A6J1E8G5 DNA-binding protein RHL1-like

3.3e-234

100

Show/hide

Query:  MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
        MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
Subjt:  MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI
        LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI
Subjt:  LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI

Query:  NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVERP
        NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVERP
Subjt:  NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVERP

Query:  RFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDT
        RFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDT
Subjt:  RFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDT

Query:  EYEDEDDIEELSSSQEDTDEDWTS
        EYEDEDDIEELSSSQEDTDEDWTS
Subjt:  EYEDEDDIEELSSSQEDTDEDWTS

A0A6J1GT04 DNA-binding protein RHL1-like isoform X2

5.7e-186

82.12

Show/hide

Query:  MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
        MARGSSSSK ++A  E+EPEIAARKRLKKLAF+NN+LS TQAKPQ    PSATVLKH+GKDIVKKS RKNRFLFSFSGLLAPVSGGKIGELKDLG+KNPI
Subjt:  MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI
        LYL+FPQGR+KLFGTI+YPKNRYLTLQFSRGGKNV CED FDNMIVFSDAWWIGTKDEN EE RLDFPKE++M +CGEYDFNGGAGV +T K S QKKGI
Subjt:  LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI

Query:  NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKE-ESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVER
        NR EE SLKGEHGDDLVDLEDNMT  +KTTPVRHSERSAGKVFNFA+A S E ESAGT  D SEGEEKN+VIHEPSIGDHASE TE +SVDS+D DAVE+
Subjt:  NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKE-ESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVER

Query:  PRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKD
           L+G++  ISK+K  SRAKGNAQS NRG+LVQPTL SLFKKVEEKRTPR SKRSST KVSAQK+QLSGSK+KIDQDEG +KRRVV+ QDDGGK  RKD
Subjt:  PRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKD

Query:  TEYEDEDDIEELSSSQEDTDEDWTS
        TEYE EDDIEELSSSQEDTDEDWTS
Subjt:  TEYEDEDDIEELSSSQEDTDEDWTS

A0A6J1KHM2 DNA-binding protein RHL1-like

1.6e-225

97.17

Show/hide

Query:  MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
        MARGSSSSKRDEAKGEM+PEIAARKRLKKLAFTNNILSETQAKPQAY SPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
Subjt:  MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI
        LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI
Subjt:  LYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGI

Query:  NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVERP
        +RAEE SLK EHGDDLVDLEDNMTNSMKTTPVRHSERS GKVFNFAQAFSKEESAGT ADFSEGEEKNIVI+EPSIGDHASEKTEVVSVDSEDKDAVERP
Subjt:  NRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVERP

Query:  RFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDT
        RFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQK QLSGSKQKIDQDEGLKKR VVQGQDDGGKF RKDT
Subjt:  RFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDT

Query:  EYEDEDDIEELSSSQEDTDEDWTS
        EYEDEDDIEEL SSQEDTDEDWTS
Subjt:  EYEDEDDIEELSSSQEDTDEDWTS

SwissProt top hits

e value

%identity

Alignment

O81242 DNA-binding protein RHL1

5.5e-77

46.38

Show/hide

Query:  MARGSSSSKRDEAKGEM-EPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNP
        M R SSS K     G+  + E   RKRLK LA  N +LS++ AK  +   PS  VLKHHG DI++KSQRKNRFLFSF GLLAP+S   IG+L  L TKNP
Subjt:  MARGSSSSKRDEAKGEM-EPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNP

Query:  ILYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQ------
        +LYL+FPQGR+KLFGTI+YPKNRYLTLQFSRGGKNV+C+D FDNMIVFS++WWIGTK+ENPEE RLDFPKE+   +  E+DF GGAG A++ K+      
Subjt:  ILYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQ------

Query:  -----SVQKKGINRAEEKSLKGEHGDDLVDLED--NMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEV
                   ++  +  S  GE  DD + +     +T  ++ TPVR S+R++GK FNFA+  S+  S  +  + S+ +EK ++  EP     + E+++ 
Subjt:  -----SVQKKGINRAEEKSLKGEHGDDLVDLED--NMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEV

Query:  VSVDSEDKDAVERPRFLEGNKTPISKSKNGSR--AKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSST
                         +GN    S SK      AK          LVQ TL +LFKK EEK    S  +SS+
Subjt:  VSVDSEDKDAVERPRFLEGNKTPISKSKNGSR--AKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSST

Arabidopsis top hits

e value

%identity

Alignment

AT1G48380.1 root hair initiation protein root hairless 1 (RHL1)

3.9e-78

46.38

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Query:  MARGSSSSKRDEAKGEM-EPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNP
        M R SSS K     G+  + E   RKRLK LA  N +LS++ AK  +   PS  VLKHHG DI++KSQRKNRFLFSF GLLAP+S   IG+L  L TKNP
Subjt:  MARGSSSSKRDEAKGEM-EPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNP

Query:  ILYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQ------
        +LYL+FPQGR+KLFGTI+YPKNRYLTLQFSRGGKNV+C+D FDNMIVFS++WWIGTK+ENPEE RLDFPKE+   +  E+DF GGAG A++ K+      
Subjt:  ILYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQ------

Query:  -----SVQKKGINRAEEKSLKGEHGDDLVDLED--NMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEV
                   ++  +  S  GE  DD + +     +T  ++ TPVR S+R++GK FNFA+  S+  S  +  + S+ +EK ++  EP     + E+++ 
Subjt:  -----SVQKKGINRAEEKSLKGEHGDDLVDLED--NMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEV

Query:  VSVDSEDKDAVERPRFLEGNKTPISKSKNGSR--AKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSST
                         +GN    S SK      AK          LVQ TL +LFKK EEK    S  +SS+
Subjt:  VSVDSEDKDAVERPRFLEGNKTPISKSKNGSR--AKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSST

AT1G48380.2 root hair initiation protein root hairless 1 (RHL1)

2.9e-73

42.82

Show/hide

Query:  MARGSSSSKRDEAKGEM-EPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNP
        M R SSS K     G+  + E   RKRLK LA  N +LS++ AK  +   PS  VLKHHG DI++KSQRKNRFLFSF GLLAP+S   IG+L  L TKNP
Subjt:  MARGSSSSKRDEAKGEM-EPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNP

Query:  ILYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMT---------------------------
        +LYL+FPQGR+KLFGTI+YPKNRYLTLQFSRGGKNV+C+D FDNMIVFS++WWIGTK+ENPEE RLDFPKE+                            
Subjt:  ILYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMT---------------------------

Query:  ----MGKCGEYDFNGGAGVASTSKQ-----------SVQKKGINRAEEKSLKGEHGDDLVDLED--NMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESA
              +  E+DF GGAG A++ K+                 ++  +  S  GE  DD + +     +T  ++ TPVR S+R++GK FNFA+  S+  S 
Subjt:  ----MGKCGEYDFNGGAGVASTSKQ-----------SVQKKGINRAEEKSLKGEHGDDLVDLED--NMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESA

Query:  GTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVERPRFLEGNKTPISKSKNGSR--AKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSK
         +  + S+ +EK ++  EP     + E+++                  +GN    S SK      AK          LVQ TL +LFKK EEK    S  
Subjt:  GTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVERPRFLEGNKTPISKSKNGSR--AKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSK

Query:  RSST
        +SS+
Subjt:  RSST

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGCGAGGATCATCGTCTTCGAAGAGGGACGAAGCAAAAGGAGAAATGGAACCTGAGATTGCAGCACGAAAGCGGCTTAAGAAGCTTGCATTTACCAATAACATACT
TTCAGAAACCCAGGCCAAGCCCCAGGCGTATCCGAGCCCTTCAGCGACGGTTCTGAAGCACCATGGCAAAGACATTGTCAAGAAATCTCAGCGAAAGAACAGGTTCCTGT
TCTCGTTTTCGGGCTTGCTCGCTCCCGTTAGTGGAGGAAAGATTGGCGAGCTCAAGGATTTGGGGACCAAGAATCCCATTCTCTATCTCGACTTTCCTCAGGGGCGTCTA
AAGTTGTTTGGAACTATCGTGTATCCGAAGAACAGATATTTGACATTGCAGTTTTCTAGAGGCGGAAAGAATGTGATGTGTGAAGATTGTTTTGATAATATGATTGTCTT
TTCTGATGCATGGTGGATTGGAACAAAAGATGAAAATCCAGAGGAGGACCGTCTTGATTTTCCTAAAGAAATGACTATGGGAAAATGTGGAGAATATGACTTTAACGGTG
GTGCTGGTGTTGCCAGTACGAGTAAGCAGAGTGTTCAAAAGAAGGGAATCAATCGTGCCGAAGAAAAATCCCTTAAAGGAGAACATGGAGATGACTTAGTGGACCTGGAA
GACAACATGACAAATTCAATGAAGACTACGCCAGTTAGACATTCTGAAAGATCTGCCGGAAAAGTATTCAATTTTGCACAGGCTTTTTCGAAGGAGGAGTCTGCTGGCAC
TTACGCTGATTTTTCTGAAGGAGAAGAAAAGAATATTGTCATCCATGAACCTTCAATTGGAGATCATGCGAGTGAAAAGACAGAAGTTGTCTCTGTCGATTCTGAAGATA
AAGATGCTGTGGAAAGACCTCGATTTCTTGAAGGAAATAAAACACCAATTTCTAAGTCTAAAAATGGTTCTCGGGCCAAGGGAAATGCTCAGAGTGGTAATCGTGGTTTA
CTTGTCCAGCCTACTCTACCTAGTTTGTTCAAGAAAGTGGAGGAAAAGAGGACACCGAGAAGTTCAAAGAGGTCTTCAACACCCAAAGTTTCTGCCCAAAAGATGCAGCT
CTCTGGTTCAAAGCAAAAGATTGACCAGGATGAAGGATTAAAGAAGAGGAGGGTTGTCCAGGGACAAGATGATGGAGGAAAATTCCGGAGGAAGGATACAGAATATGAGG
ACGAAGATGACATCGAAGAGTTATCGAGCTCTCAAGAGGACACTGATGAAGATTGGACAAGTTGA

mRNA sequence

Show/hide mRNA sequence

AAAGAAAGGAGTAAACTGGAGTCCAGAGCTGACTACCGGCATCAGAAATGGCGCGAGGATCATCGTCTTCGAAGAGGGACGAAGCAAAAGGAGAAATGGAACCTGAGATT
GCAGCACGAAAGCGGCTTAAGAAGCTTGCATTTACCAATAACATACTTTCAGAAACCCAGGCCAAGCCCCAGGCGTATCCGAGCCCTTCAGCGACGGTTCTGAAGCACCA
TGGCAAAGACATTGTCAAGAAATCTCAGCGAAAGAACAGGTTCCTGTTCTCGTTTTCGGGCTTGCTCGCTCCCGTTAGTGGAGGAAAGATTGGCGAGCTCAAGGATTTGG
GGACCAAGAATCCCATTCTCTATCTCGACTTTCCTCAGGGGCGTCTAAAGTTGTTTGGAACTATCGTGTATCCGAAGAACAGATATTTGACATTGCAGTTTTCTAGAGGC
GGAAAGAATGTGATGTGTGAAGATTGTTTTGATAATATGATTGTCTTTTCTGATGCATGGTGGATTGGAACAAAAGATGAAAATCCAGAGGAGGACCGTCTTGATTTTCC
TAAAGAAATGACTATGGGAAAATGTGGAGAATATGACTTTAACGGTGGTGCTGGTGTTGCCAGTACGAGTAAGCAGAGTGTTCAAAAGAAGGGAATCAATCGTGCCGAAG
AAAAATCCCTTAAAGGAGAACATGGAGATGACTTAGTGGACCTGGAAGACAACATGACAAATTCAATGAAGACTACGCCAGTTAGACATTCTGAAAGATCTGCCGGAAAA
GTATTCAATTTTGCACAGGCTTTTTCGAAGGAGGAGTCTGCTGGCACTTACGCTGATTTTTCTGAAGGAGAAGAAAAGAATATTGTCATCCATGAACCTTCAATTGGAGA
TCATGCGAGTGAAAAGACAGAAGTTGTCTCTGTCGATTCTGAAGATAAAGATGCTGTGGAAAGACCTCGATTTCTTGAAGGAAATAAAACACCAATTTCTAAGTCTAAAA
ATGGTTCTCGGGCCAAGGGAAATGCTCAGAGTGGTAATCGTGGTTTACTTGTCCAGCCTACTCTACCTAGTTTGTTCAAGAAAGTGGAGGAAAAGAGGACACCGAGAAGT
TCAAAGAGGTCTTCAACACCCAAAGTTTCTGCCCAAAAGATGCAGCTCTCTGGTTCAAAGCAAAAGATTGACCAGGATGAAGGATTAAAGAAGAGGAGGGTTGTCCAGGG
ACAAGATGATGGAGGAAAATTCCGGAGGAAGGATACAGAATATGAGGACGAAGATGACATCGAAGAGTTATCGAGCTCTCAAGAGGACACTGATGAAGATTGGACAAGTT
GAGGTTACACTCTAACAATGTAACCCACAGCAACAGCTAGGATTGCATAGCAAGGATTGTATTCAAGGAGATGCCATGCTCTACCAGTTTCTTTGATGCTGCTGGCTAAC
TAAAATTAAAGAAACTTAACCATAAAATAGTCTTGAAGTTAAGTTTTTATCATAAAGTTAGGCAATGTAAACCTGTACACATTTCGTAGGGGCTTGGACCAAATTTGCAA
CTTAAAAGTTGAAAGTATTCGACAATCTTATATATTAAG

Protein sequence

Show/hide protein sequence

MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRL
KLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYDFNGGAGVASTSKQSVQKKGINRAEEKSLKGEHGDDLVDLE
DNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGL
LVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDTEYEDEDDIEELSSSQEDTDEDWTS

CmoCh13G009940 (gene) of Cucurbita moschata (Rifu) v1 genome