CuGenDBv2

Gene ID	CmoCh13G010180
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	DDE Tnp4 domain-containing protein
Genome location	Cmo_Chr13:8630623..8631514
RNA-Seq Expression	CmoCh13G010180
Synteny	CmoCh13G010180
Gene Ontology terms	GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR040344 - Uncharacterized protein At3g17950-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6584313.1 hypothetical protein SDJN03_20245, partial [Cucurbita argyrosperma subsp. sororia]

3.5e-97

99.47

Show/hide

Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW

Query:  RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQT+EDTSAAGALCRFSVSLTGICSGGAG
Subjt:  RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

XP_016899568.1 PREDICTED: uncharacterized protein At3g17950 isoform X2 [Cucumis melo]

1.4e-93

95.74

Show/hide

Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AAT  AGGGSRKSKK KRKTT APALVADRKRRWW
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW

Query:  RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RLCRDDGVKPASLGEFLEVERRFGDGAF+GNAVDLEGVV+ADQQRNGRSLFADGRVLPPAQTEEDTSA GALCRFSVSLTGICSGGAG
Subjt:  RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

XP_022924210.1 uncharacterized protein At3g17950 [Cucurbita moschata]

1.6e-97

100

Show/hide

Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW

Query:  RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
Subjt:  RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

XP_023001809.1 uncharacterized protein At3g17950-like [Cucurbita maxima]

7.3e-95

97.87

Show/hide

Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AAT AAGGGSRKSKKPKRKTTAAPALVADRKRRWW
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW

Query:  RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RLCRDDGVKPASLGEFLEVERRFGDGAFF NAVDLEGVVSADQQRNGR LFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
Subjt:  RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

XP_023520118.1 uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo]

3.5e-97

99.47

Show/hide

Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH+AATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW

Query:  RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
Subjt:  RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CPP8 uncharacterized protein At3g17950 isoform X1

6.7e-94

95.74

Show/hide

Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AAT  AGGGSRKSKK KRKTT APALVADRKRRWW
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW

Query:  RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RLCRDDGVKPASLGEFLEVERRFGDGAF+GNAVDLEGVV+ADQQRNGRSLFADGRVLPPAQTEEDTSA GALCRFSVSLTGICSGGAG
Subjt:  RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

A0A1S4DUB1 uncharacterized protein At3g17950 isoform X2

6.7e-94

95.74

Show/hide

Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AAT  AGGGSRKSKK KRKTT APALVADRKRRWW
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW

Query:  RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RLCRDDGVKPASLGEFLEVERRFGDGAF+GNAVDLEGVV+ADQQRNGRSLFADGRVLPPAQTEEDTSA GALCRFSVSLTGICSGGAG
Subjt:  RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

A0A5D3BLI7 Putative nuclease HARBI1

6.7e-94

95.74

Show/hide

Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AAT  AGGGSRKSKK KRKTT APALVADRKRRWW
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW

Query:  RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RLCRDDGVKPASLGEFLEVERRFGDGAF+GNAVDLEGVV+ADQQRNGRSLFADGRVLPPAQTEEDTSA GALCRFSVSLTGICSGGAG
Subjt:  RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

A0A6J1E8Y2 uncharacterized protein At3g17950

7.6e-98

100

Show/hide

Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW

Query:  RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
Subjt:  RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

A0A6J1KNQ0 uncharacterized protein At3g17950-like

3.5e-95

97.87

Show/hide

Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AAT AAGGGSRKSKKPKRKTTAAPALVADRKRRWW
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW

Query:  RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RLCRDDGVKPASLGEFLEVERRFGDGAFF NAVDLEGVVSADQQRNGR LFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
Subjt:  RLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

SwissProt top hits

e value

%identity

Alignment

Q6DR24 Uncharacterized protein At3g17950

1.1e-37

51.71

Show/hide

Query:  PSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNR-DQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWWRLCRDD-
        PSSPT SS+SSSDLDTESTGSFFHDRS +LGTLMG SF A   + FR  S+       A + A+   +R++ + KR  + +      R+R+WWR CRDD 
Subjt:  PSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNR-DQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWWRLCRDD-

Query:  ------GV-------KPASLGEFLEVERRFGDGAFFGNA-VDLEGVVSA---DQQ--RNGRSLFADGRVLPPAQTE----EDTSAAGALCRFSVSLTGIC
              G+       K +SLGE+LEVERRFGD A + +A  +LE  V A   DQQ     R+LFADGRVLPPA  E    E T  A +LCRF VSLTGIC
Subjt:  ------GV-------KPASLGEFLEVERRFGDGAFFGNA-VDLEGVVSA---DQQ--RNGRSLFADGRVLPPAQTE----EDTSAAGALCRFSVSLTGIC

Query:  SGGAG
        SGG G
Subjt:  SGGAG

Arabidopsis top hits

e value

%identity

Alignment

AT3G17950.1 unknown protein

7.9e-39

51.71

Show/hide

Query:  PSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNR-DQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWWRLCRDD-
        PSSPT SS+SSSDLDTESTGSFFHDRS +LGTLMG SF A   + FR  S+       A + A+   +R++ + KR  + +      R+R+WWR CRDD 
Subjt:  PSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNR-DQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWWRLCRDD-

Query:  ------GV-------KPASLGEFLEVERRFGDGAFFGNA-VDLEGVVSA---DQQ--RNGRSLFADGRVLPPAQTE----EDTSAAGALCRFSVSLTGIC
              G+       K +SLGE+LEVERRFGD A + +A  +LE  V A   DQQ     R+LFADGRVLPPA  E    E T  A +LCRF VSLTGIC
Subjt:  ------GV-------KPASLGEFLEVERRFGDGAFFGNA-VDLEGVVSA---DQQ--RNGRSLFADGRVLPPAQTE----EDTSAAGALCRFSVSLTGIC

Query:  SGGAG
        SGG G
Subjt:  SGGAG

AT3G17950.2 unknown protein

2.1e-23

44.77

Show/hide

Query:  MGVSFPA---ITFRVPSQNR-DQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWWRLCRDD-------GV-------KPASLGEFLEVERRFGDG
        MG SF A   + FR  S+       A + A+   +R++ + KR  + +      R+R+WWR CRDD       G+       K +SLGE+LEVERRFGD 
Subjt:  MGVSFPA---ITFRVPSQNR-DQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWWRLCRDD-------GV-------KPASLGEFLEVERRFGDG

Query:  AFFGNA-VDLEGVVSA---DQQ--RNGRSLFADGRVLPPAQTE----EDTSAAGALCRFSVSLTGICSGGAG
        A + +A  +LE  V A   DQQ     R+LFADGRVLPPA  E    E T  A +LCRF VSLTGICSGG G
Subjt:  AFFGNA-VDLEGVVSA---DQQ--RNGRSLFADGRVLPPAQTE----EDTSAAGALCRFSVSLTGICSGGAG

AT5G02440.1 unknown protein

4.4e-05

52.73

Show/hide

Query:  SPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGV-SFPAITFRVPSQNRDQHAAA
        SP+ SS SSSDLD++S GSFF DRS +LG L+G+ SF  ++ R      DQ  AA
Subjt:  SPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGV-SFPAITFRVPSQNRDQHAAA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

ATGTTGAATCCGGCCAACGATCTGTTACCGCCGCCGTCGTCTCCGACCAATTCATCCATTTCCTCCTCCGATCTCGACACTGAGTCTACAGGTTCGTTCTTCCATGACAG
GAGCACCAGCTTGGGGACTCTAATGGGTGTTAGTTTCCCGGCGATTACCTTCCGAGTGCCCTCCCAGAACCGAGACCAACACGCCGCCGCGACCGCCGCCGCTGGTGGTG
GTTCCCGCAAGAGTAAGAAGCCAAAGAGAAAAACGACGGCAGCGCCGGCACTGGTCGCAGATCGGAAACGGCGGTGGTGGCGGCTATGCAGGGATGACGGTGTTAAGCCG
GCGTCTCTGGGCGAGTTTCTTGAGGTGGAACGGAGATTTGGGGACGGTGCTTTCTTCGGCAACGCGGTGGATCTGGAAGGCGTAGTTTCGGCGGATCAGCAGAGGAATGG
CCGGTCTTTGTTCGCCGATGGGAGGGTTCTTCCGCCGGCACAAACGGAGGAAGATACGTCTGCGGCCGGCGCTCTATGCCGATTTTCTGTATCGCTCACCGGAATTTGCA
GCGGCGGTGCCGGCTAAAATGTGGGATTTGATTTGTGAGAGTATATTTAAAATCTTATATTATATTTAATTAATCAAACGCTTGAATTAAGGTAAGAAAAAAGAAAAAAA
GAAAAAAGGAAAATGTCACCTTTATCGTGTAGGTGACCCTCTTTTTAATTTCCTTTTAATCATCTCACAGGTTACTTCTATCTTCTTTTTTTCTTTTTCAAAATAATAAT
AATAATAAAATAACACTCAGATCTTCATTTTTGAAGCTTTGGAGAT

Protein sequence

Show/hide protein sequence

MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWWRLCRDDGVKP
ASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

CmoCh13G010180 (gene) of Cucurbita moschata (Rifu) v1 genome