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CmoCh13G010230 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G010230
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotection of telomeres protein 1a-like isoform X2
Genome locationCmo_Chr13:8644141..8645646
RNA-Seq ExpressionCmoCh13G010230
SyntenyCmoCh13G010230
Gene Ontology termsGO:0016233 - telomere capping (biological process)
GO:0032210 - regulation of telomere maintenance via telomerase (biological process)
GO:0051974 - negative regulation of telomerase activity (biological process)
GO:0000783 - nuclear telomere cap complex (cellular component)
GO:0010521 - telomerase inhibitor activity (molecular function)
GO:0098505 - G-rich strand telomeric DNA binding (molecular function)
InterPro domainsIPR028389 - Protection of telomeres protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584317.1 Protection of telomeres protein 1b, partial [Cucurbita argyrosperma subsp. sororia]2.5e-5980.67Show/hide
Query:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPSIDVLTRKRNKL
        VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDG                             DKFFGEDPSIDVLTRKRNKL
Subjt:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPSIDVLTRKRNKL

Query:  LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD
        LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD
Subjt:  LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD

KAG7019909.1 Protection of telomeres protein 1b [Cucurbita argyrosperma subsp. argyrosperma]2.5e-5980.67Show/hide
Query:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPSIDVLTRKRNKL
        VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDG                             DKFFGEDPSIDVLTRKRNKL
Subjt:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPSIDVLTRKRNKL

Query:  LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD
        LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD
Subjt:  LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD

XP_022924202.1 protection of telomeres protein 1b-like isoform X1 [Cucurbita moschata]2.5e-5980.67Show/hide
Query:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPSIDVLTRKRNKL
        VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDG                             DKFFGEDPSIDVLTRKRNKL
Subjt:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPSIDVLTRKRNKL

Query:  LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD
        LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD
Subjt:  LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD

XP_022924203.1 protection of telomeres protein 1a-like isoform X2 [Cucurbita moschata]2.5e-5980.67Show/hide
Query:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPSIDVLTRKRNKL
        VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDG                             DKFFGEDPSIDVLTRKRNKL
Subjt:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPSIDVLTRKRNKL

Query:  LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD
        LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD
Subjt:  LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD

XP_023519964.1 protection of telomeres protein 1b-like isoform X1 [Cucurbita pepo subsp. pepo]2.1e-5878.67Show/hide
Query:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPSIDVLTRKRNKL
        VTAKFKCVVRVIA+YPFQA+DFRSPEGTYRVRLSLEDPTAR+HAFLYAEDG                             DKFFGEDPSIDVLTRKRNKL
Subjt:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPSIDVLTRKRNKL

Query:  LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD
        LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD
Subjt:  LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD

TrEMBL top hitse value%identityAlignment
A0A1S4DW72 protection of telomeres protein 1a-like isoform X29.7e-4969.33Show/hide
Query:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPSIDVLTRKRNKL
        VTAKFKCVVRVIAIYP QAKDFRSPEGTYRVRL LEDPTAR+HA LYAEDG                             ++FFG  PS D LTRKRNKL
Subjt:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPSIDVLTRKRNKL

Query:  LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD
        LGVSASEKNEASTR+PPWVQCCLKSYYL+KQD  GSRQYRIFGTRL   D
Subjt:  LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD

A0A6J1E898 protection of telomeres protein 1b-like isoform X11.2e-5980.67Show/hide
Query:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPSIDVLTRKRNKL
        VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDG                             DKFFGEDPSIDVLTRKRNKL
Subjt:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPSIDVLTRKRNKL

Query:  LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD
        LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD
Subjt:  LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD

A0A6J1EBQ9 protection of telomeres protein 1a-like isoform X21.2e-5980.67Show/hide
Query:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPSIDVLTRKRNKL
        VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDG                             DKFFGEDPSIDVLTRKRNKL
Subjt:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPSIDVLTRKRNKL

Query:  LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD
        LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD
Subjt:  LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD

A0A6J1KHL8 protection of telomeres protein 1b-like isoform X15.1e-5877.33Show/hide
Query:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPSIDVLTRKRNKL
        VTAKFKCV+RVIAIYPFQAKDFRSPEGTYRVRLSLEDPTAR+HAFLYAEDG                             DKFFG+DPSIDVLTRKRNKL
Subjt:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPSIDVLTRKRNKL

Query:  LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD
        LGVSASE NEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVA+D
Subjt:  LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD

A0A6J1KRJ5 protection of telomeres protein 1a-like isoform X25.1e-5877.33Show/hide
Query:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPSIDVLTRKRNKL
        VTAKFKCV+RVIAIYPFQAKDFRSPEGTYRVRLSLEDPTAR+HAFLYAEDG                             DKFFG+DPSIDVLTRKRNKL
Subjt:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPSIDVLTRKRNKL

Query:  LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD
        LGVSASE NEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVA+D
Subjt:  LGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD

SwissProt top hitse value%identityAlignment
Q56Y52 Protection of telomeres protein 1a1.2e-2238.99Show/hide
Query:  LMSTVVIP-VTAKFKCVVRVIAIYPFQAKDFRSPEGT--YRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGED-P
        LM  +  P VT K++C+VRV+A YP+Q +DF S E    ++V L+LED TA + AFL  +D  +                             F+G    
Subjt:  LMSTVVIP-VTAKFKCVVRVIAIYPFQAKDFRSPEGT--YRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGED-P

Query:  SIDVLTRKRNKLLGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLV
          + L +KRN LLG+  S  N  + RNPPW++CC+ SYY +K D W +R YRIFGTRL+
Subjt:  SIDVLTRKRNKLLGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLV

Q6NKX5 Protection of telomeres protein 1b3.0e-2342Show/hide
Query:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPS-IDVLTRKRNK
        VTAKF+CVVR I +YP   +  R   G  ++   LED TAR+HA LYA++G                             +KFFG D S  + L +K N+
Subjt:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPS-IDVLTRKRNK

Query:  LLGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVAS
        LLG    E+ E   RNPPWVQCCL S+Y  K D W SR++RIF T + AS
Subjt:  LLGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVAS

Arabidopsis top hitse value%identityAlignment
AT2G05210.1 Nucleic acid-binding, OB-fold-like protein8.2e-2438.99Show/hide
Query:  LMSTVVIP-VTAKFKCVVRVIAIYPFQAKDFRSPEGT--YRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGED-P
        LM  +  P VT K++C+VRV+A YP+Q +DF S E    ++V L+LED TA + AFL  +D  +                             F+G    
Subjt:  LMSTVVIP-VTAKFKCVVRVIAIYPFQAKDFRSPEGT--YRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGED-P

Query:  SIDVLTRKRNKLLGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLV
          + L +KRN LLG+  S  N  + RNPPW++CC+ SYY +K D W +R YRIFGTRL+
Subjt:  SIDVLTRKRNKLLGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLV

AT2G05210.2 Nucleic acid-binding, OB-fold-like protein8.2e-2438.99Show/hide
Query:  LMSTVVIP-VTAKFKCVVRVIAIYPFQAKDFRSPEGT--YRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGED-P
        LM  +  P VT K++C+VRV+A YP+Q +DF S E    ++V L+LED TA + AFL  +D  +                             F+G    
Subjt:  LMSTVVIP-VTAKFKCVVRVIAIYPFQAKDFRSPEGT--YRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGED-P

Query:  SIDVLTRKRNKLLGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLV
          + L +KRN LLG+  S  N  + RNPPW++CC+ SYY +K D W +R YRIFGTRL+
Subjt:  SIDVLTRKRNKLLGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLV

AT2G05210.3 Nucleic acid-binding, OB-fold-like protein8.2e-2438.99Show/hide
Query:  LMSTVVIP-VTAKFKCVVRVIAIYPFQAKDFRSPEGT--YRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGED-P
        LM  +  P VT K++C+VRV+A YP+Q +DF S E    ++V L+LED TA + AFL  +D  +                             F+G    
Subjt:  LMSTVVIP-VTAKFKCVVRVIAIYPFQAKDFRSPEGT--YRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGED-P

Query:  SIDVLTRKRNKLLGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLV
          + L +KRN LLG+  S  N  + RNPPW++CC+ SYY +K D W +R YRIFGTRL+
Subjt:  SIDVLTRKRNKLLGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLV

AT5G06310.1 Nucleic acid-binding, OB-fold-like protein2.2e-2442Show/hide
Query:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPS-IDVLTRKRNK
        VTAKF+CVVR I +YP   +  R   G  ++   LED TAR+HA LYA++G                             +KFFG D S  + L +K N+
Subjt:  VTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAFLYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPS-IDVLTRKRNK

Query:  LLGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVAS
        LLG    E+ E   RNPPWVQCCL S+Y  K D W SR++RIF T + AS
Subjt:  LLGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTTGAAGGTTCCATGAATGGTCTTCAAAATGAACGCGTGCTTTCAGTTATTTTGTTTCTGTTGTGCCGATTCCCTCTTTCATATATTGATTGTATGGATGTATT
CGAGAGAAAACTTCTTCCTCACATATTTCAAAATCCTTGTTTATTTTTCTCGGTTACCCATTTGATGTCCACAGTTGTCATCCCGGTAACTGCAAAATTCAAATGTGTTG
TACGAGTTATAGCAATATATCCATTCCAGGCCAAGGACTTCCGCTCTCCTGAAGGGACTTACAGGGTTAGGCTGAGCCTAGAAGATCCAACTGCAAGAGTTCATGCCTTC
TTATATGCGGAGGATGGAAACTTTCTTGTATGTGAAGATCGAGGAAATGTTCTACTTATTGGCTCTCTTCTGATTGTTTTTCACATTTATCATAATCCACTCAAGGACAA
ATTCTTTGGTGAAGATCCATCAATTGATGTTTTAACAAGGAAGCGAAACAAGTTACTTGGGGTTTCAGCAAGTGAGAAAAATGAAGCGAGTACAAGAAATCCTCCATGGG
TGCAGTGCTGCCTAAAATCTTATTACCTTGATAAACAAGATGCGTGGGGAAGTAGACAGTACAGAATATTTGGCACTCGGCTAGTAGCATCAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTTGAAGGTTCCATGAATGGTCTTCAAAATGAACGCGTGCTTTCAGTTATTTTGTTTCTGTTGTGCCGATTCCCTCTTTCATATATTGATTGTATGGATGTATT
CGAGAGAAAACTTCTTCCTCACATATTTCAAAATCCTTGTTTATTTTTCTCGGTTACCCATTTGATGTCCACAGTTGTCATCCCGGTAACTGCAAAATTCAAATGTGTTG
TACGAGTTATAGCAATATATCCATTCCAGGCCAAGGACTTCCGCTCTCCTGAAGGGACTTACAGGGTTAGGCTGAGCCTAGAAGATCCAACTGCAAGAGTTCATGCCTTC
TTATATGCGGAGGATGGAAACTTTCTTGTATGTGAAGATCGAGGAAATGTTCTACTTATTGGCTCTCTTCTGATTGTTTTTCACATTTATCATAATCCACTCAAGGACAA
ATTCTTTGGTGAAGATCCATCAATTGATGTTTTAACAAGGAAGCGAAACAAGTTACTTGGGGTTTCAGCAAGTGAGAAAAATGAAGCGAGTACAAGAAATCCTCCATGGG
TGCAGTGCTGCCTAAAATCTTATTACCTTGATAAACAAGATGCGTGGGGAAGTAGACAGTACAGAATATTTGGCACTCGGCTAGTAGCATCAGATTAA
Protein sequenceShow/hide protein sequence
MDVEGSMNGLQNERVLSVILFLLCRFPLSYIDCMDVFERKLLPHIFQNPCLFFSVTHLMSTVVIPVTAKFKCVVRVIAIYPFQAKDFRSPEGTYRVRLSLEDPTARVHAF
LYAEDGNFLVCEDRGNVLLIGSLLIVFHIYHNPLKDKFFGEDPSIDVLTRKRNKLLGVSASEKNEASTRNPPWVQCCLKSYYLDKQDAWGSRQYRIFGTRLVASD