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CmoCh13G010470 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G010470
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr13:8767160..8767384
RNA-Seq ExpressionCmoCh13G010470
SyntenyCmoCh13G010470
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4281319.1 unnamed protein product [Prunus armeniaca]1.2e-1356.76Show/hide
Query:  MARLMREFGSQNGSFGLAGDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA
        M R+ RE GS +G  G+A   +L+FWAAL +LC++S I+FSC+DG+S+K +N+  D ELYG GCAA CGA CGA
Subjt:  MARLMREFGSQNGSFGLAGDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA

KAE8652552.1 hypothetical protein Csa_013579 [Cucumis sativus]1.6e-2485.33Show/hide
Query:  MARLMREFGSQNGSFGLA-GDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA
        MARLMRE  SQNGSFGLA G+ Y LFW ALFTLCIIST+IFSCSDGMS KDRNST DVELYG GCAAGCGAGCGA
Subjt:  MARLMREFGSQNGSFGLA-GDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA

KAG6572949.1 hypothetical protein SDJN03_26836, partial [Cucurbita argyrosperma subsp. sororia]7.5e-1978.57Show/hide
Query:  MARLMREFGSQNGSFGLAGDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGA
        MARL+ E GS +GSFGL+GDI  LF AALFTLCIIS I FSCSDG+S K+RNSTADVELYG GCAAGCGA
Subjt:  MARLMREFGSQNGSFGLAGDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGA

KAG6584341.1 hypothetical protein SDJN03_20273, partial [Cucurbita argyrosperma subsp. sororia]1.5e-32100Show/hide
Query:  MARLMREFGSQNGSFGLAGDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA
        MARLMREFGSQNGSFGLAGDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA
Subjt:  MARLMREFGSQNGSFGLAGDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA

ONI09219.1 hypothetical protein PRUPE_5G224700 [Prunus persica]1.2e-1355.41Show/hide
Query:  MARLMREFGSQNGSFGLAGDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA
        M R+ RE GS +G  G+A   +L+FWAAL +LC++S I+FSC+DG+S+K++N+  D +LYG GCAA CGA CGA
Subjt:  MARLMREFGSQNGSFGLAGDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA

TrEMBL top hitse value%identityAlignment
A0A0A0LQU7 Uncharacterized protein7.5e-2585.33Show/hide
Query:  MARLMREFGSQNGSFGLA-GDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA
        MARLMRE  SQNGSFGLA G+ Y LFW ALFTLCIIST+IFSCSDGMS KDRNST DVELYG GCAAGCGAGCGA
Subjt:  MARLMREFGSQNGSFGLA-GDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA

A0A6J5UX91 Uncharacterized protein6.0e-1456.76Show/hide
Query:  MARLMREFGSQNGSFGLAGDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA
        M R+ RE GS +G  G+A   +L+FWAAL +LC++S I+FSC+DG+S+K +N+  D ELYG GCAA CGA CGA
Subjt:  MARLMREFGSQNGSFGLAGDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA

A0A6P3ZT85 uncharacterized protein LOC1074186063.9e-1362.16Show/hide
Query:  MARLMREFGSQNGSFGLAGDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA
        M RL R+  S +GS G AG  +++ W AL  +CIIS IIFSC+DG+S K++ STAD ELYG GCAAGCGAGCGA
Subjt:  MARLMREFGSQNGSFGLAGDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA

A0A803R005 Uncharacterized protein4.3e-1257.33Show/hide
Query:  MARLMREFGSQNGSFGLAGDIYLLFWAA-LFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA
        M RL RE  + +G  G     +L+F    L TLCI+STIIFSC+DG+S K++ S  D ELYG GCAAGCGAGCGA
Subjt:  MARLMREFGSQNGSFGLAGDIYLLFWAA-LFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA

M5WF59 Uncharacterized protein6.0e-1455.41Show/hide
Query:  MARLMREFGSQNGSFGLAGDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA
        M R+ RE GS +G  G+A   +L+FWAAL +LC++S I+FSC+DG+S+K++N+  D +LYG GCAA CGA CGA
Subjt:  MARLMREFGSQNGSFGLAGDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68238.1 unknown protein4.5e-0643.64Show/hide
Query:  GDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCG
        G++ L  WAA+    +I+ +IFSCSD  S    N     ++ G+ CAAGCG GCG
Subjt:  GDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCG

AT3G18250.1 Putative membrane lipoprotein2.5e-0440.35Show/hide
Query:  AGDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGC-AAGCGAGCG
        A  ++ + + A+   CI+S ++FSC+DG+S  D  +T+     G GC  AGCG GCG
Subjt:  AGDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGC-AAGCGAGCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGGCTAATGAGAGAATTTGGCAGTCAAAATGGCAGCTTTGGCCTCGCCGGTGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGTATAATCTCCAC
CATAATTTTCTCTTGCTCCGACGGCATGTCAACAAAAGACAGGAATTCCACGGCCGACGTTGAGCTTTACGGTGCCGGTTGCGCAGCCGGCTGCGGCGCTGGATGTGGTG
CTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGGCTAATGAGAGAATTTGGCAGTCAAAATGGCAGCTTTGGCCTCGCCGGTGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGTATAATCTCCAC
CATAATTTTCTCTTGCTCCGACGGCATGTCAACAAAAGACAGGAATTCCACGGCCGACGTTGAGCTTTACGGTGCCGGTTGCGCAGCCGGCTGCGGCGCTGGATGTGGTG
CTTGA
Protein sequenceShow/hide protein sequence
MARLMREFGSQNGSFGLAGDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA