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CmoCh13G010670 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G010670
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B
Genome locationCmo_Chr13:8860424..8865437
RNA-Seq ExpressionCmoCh13G010670
SyntenyCmoCh13G010670
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR039993 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137473.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucumis sativus]1.5e-5295.24Show/hide
Query:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFDPE+PYKDPVAMLEMRE+IVREKWI+IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  SVESE
          ESE
Subjt:  SVESE

XP_022924082.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucurbita moschata]1.8e-55100Show/hide
Query:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  SVESE
        SVESE
Subjt:  SVESE

XP_022954577.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita moschata]7.8e-5497.14Show/hide
Query:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  SVESE
        +VE+E
Subjt:  SVESE

XP_022994087.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita maxima]1.7e-5396.19Show/hide
Query:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  SVESE
        +VE+E
Subjt:  SVESE

XP_038894613.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Benincasa hispida]2.7e-5497.14Show/hide
Query:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  SVESE
        + ESE
Subjt:  SVESE

TrEMBL top hitse value%identityAlignment
A0A0A0LSZ4 Uncharacterized protein7.1e-5395.24Show/hide
Query:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFDPE+PYKDPVAMLEMRE+IVREKWI+IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  SVESE
          ESE
Subjt:  SVESE

A0A6J1E7Z3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B8.9e-56100Show/hide
Query:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  SVESE
        SVESE
Subjt:  SVESE

A0A6J1GRC0 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like3.8e-5497.14Show/hide
Query:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  SVESE
        +VE+E
Subjt:  SVESE

A0A6J1JUQ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like8.4e-5496.19Show/hide
Query:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  SVESE
        +VE+E
Subjt:  SVESE

A0A6J1KJX6 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B8.9e-56100Show/hide
Query:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  SVESE
        SVESE
Subjt:  SVESE

SwissProt top hitse value%identityAlignment
P80267 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 (Fragment)5.9e-0468.97Show/hide
Query:  GRKKTVEFDESPPDDFDPEHPYKDPVAML
        GRKK V+FDE  PDDFDP +PYK  VA L
Subjt:  GRKKTVEFDESPPDDFDPEHPYKDPVAML

Q03015 NADH-ubiquinone oxidoreductase 12 kDa subunit, mitochondrial1.1e-0741.82Show/hide
Query:  YKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYL
        Y D   + + ++ I+RE+W+ +   +++RE+L  CY  EGVNHL+KC HL ++YL
Subjt:  YKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYL

Q94C12 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B6.2e-4681.13Show/hide
Query:  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV
        MGRKK + EF+ES PD FDPE+PYKDPVAM+EMREHIVREKWI+IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHGPK 
Subjt:  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV

Query:  ESVESE
        E+VE+E
Subjt:  ESVESE

Q9M9B4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A7.6e-4479.81Show/hide
Query:  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV
        MGRKK + EF+ES PD FDPE+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLD+TRG+GWGKD R  SLHGPK 
Subjt:  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV

Query:  ESVE
         +VE
Subjt:  ESVE

Arabidopsis top hitse value%identityAlignment
AT1G49140.1 Complex I subunit NDUFS65.4e-4579.81Show/hide
Query:  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV
        MGRKK + EF+ES PD FDPE+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLD+TRG+GWGKD R  SLHGPK 
Subjt:  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV

Query:  ESVE
         +VE
Subjt:  ESVE

AT3G18410.1 Complex I subunit NDUFS64.4e-4781.13Show/hide
Query:  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV
        MGRKK + EF+ES PD FDPE+PYKDPVAM+EMREHIVREKWI+IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHGPK 
Subjt:  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV

Query:  ESVESE
        E+VE+E
Subjt:  ESVESE

AT3G18410.2 Complex I subunit NDUFS64.4e-4781.13Show/hide
Query:  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV
        MGRKK + EF+ES PD FDPE+PYKDPVAM+EMREHIVREKWI+IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHGPK 
Subjt:  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV

Query:  ESVESE
        E+VE+E
Subjt:  ESVESE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGAAGAAGACGGTCGAATTCGATGAATCTCCGCCGGATGATTTCGATCCGGAGCATCCGTATAAGGATCCAGTGGCGATGCTGGAGATGAGGGAACACATTGT
GAGAGAGAAGTGGATCGAAATAGAAAAGGCGAAGATACTGAGGGAAAAGCTCAGATGGTGCTACCGTATTGAAGGGGTCAACCACCTTCAGAAATGCCGCCACCTTGTTC
AACAATACCTAGATTCCACTCGCGGCATCGGCTGGGGCAAGGATGGACGCCACCCATCCCTTCATGGTCCTAAAGTGGAGTCAGTGGAATCGGAGTGA
mRNA sequenceShow/hide mRNA sequence
GGGGCGTTGTGCTCCCGTGTAGGTGCGAGAGAGCGATCCTGAGAACTGAGAGCAGGCAAAGAGAAGAGGGGAAAAAAACTATGGGGAGGAAGAAGACGGTCGAATTCGAT
GAATCTCCGCCGGATGATTTCGATCCGGAGCATCCGTATAAGGATCCAGTGGCGATGCTGGAGATGAGGGAACACATTGTGAGAGAGAAGTGGATCGAAATAGAAAAGGC
GAAGATACTGAGGGAAAAGCTCAGATGGTGCTACCGTATTGAAGGGGTCAACCACCTTCAGAAATGCCGCCACCTTGTTCAACAATACCTAGATTCCACTCGCGGCATCG
GCTGGGGCAAGGATGGACGCCACCCATCCCTTCATGGTCCTAAAGTGGAGTCAGTGGAATCGGAGTGAATCTCTGGGAGGAATAACGGTGAACAAAATGGCTTGCAGGAA
AATGTTCGGATGGCTTGCCTCCTTGTGATCTGTTTTATTATCAGGGCCTCATCAGCTGCAGTTTTTTTTATCATTATTACTTTCTTTCTTGTTTCAAAAAAGGAATATGC
ATGGATCACACACAGTGCCATGGGCAATTGATTTACGTTAGATTTCTTGTTATTGCCTGCAATTGCCAATTACTTGGACATCGGAAAAACACCCAAATAATCAAAACATC
TGCCACTGCATGCTTCTGTTCAACTTTGTATTTGTTCTCTGTTAAACAAAGGTTTCATCTGGTTGCCAGTTTTAGATATAATCGGAAGTGATGCTCCTAAAGTCTAGCAG
AAGACTTCATGGTCGATTCATTGAGTTCGTCTAACTGTATTTAAGGTATATTTAGTATGCCTTCTAGTTTAAGCAC
Protein sequenceShow/hide protein sequence
MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVESVESE