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CmoCh13G010690 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G010690
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAspartyl protease APCB1 isoform X2
Genome locationCmo_Chr13:8882887..8887238
RNA-Seq ExpressionCmoCh13G010690
SyntenyCmoCh13G010690
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ98986.1 aspartyl protease APCB1 isoform X2 [Cucumis melo var. makuwa]1.6e-2280.26Show/hide
Query:  SLVIVGLAFPGIDDEGSLDIIVFSEGITLLNLQYLYSAVGLLPYFDCYILRAKLSTNAYPALLLFYQMVLQLYQED
        S +I+G    GIDD+G LDIIVF EGITLLNLQYLYSAVG LPYFDCYILRAKL TNAYPA+LLFYQM LQLYQ+D
Subjt:  SLVIVGLAFPGIDDEGSLDIIVFSEGITLLNLQYLYSAVGLLPYFDCYILRAKLSTNAYPALLLFYQMVLQLYQED
TrEMBL top hitse value%identityAlignment
A0A5D3BIS5 Aspartyl protease APCB1 isoform X27.9e-2380.26Show/hide
Query:  SLVIVGLAFPGIDDEGSLDIIVFSEGITLLNLQYLYSAVGLLPYFDCYILRAKLSTNAYPALLLFYQMVLQLYQED
        S +I+G    GIDD+G LDIIVF EGITLLNLQYLYSAVG LPYFDCYILRAKL TNAYPA+LLFYQM LQLYQ+D
Subjt:  SLVIVGLAFPGIDDEGSLDIIVFSEGITLLNLQYLYSAVGLLPYFDCYILRAKLSTNAYPALLLFYQMVLQLYQED
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTACAACAAATTTCAGCTTGGTCATAGTTGGATTGGCATTTCCAGGCATTGATGATGAAGGGTCCTTGGATATCATTGTTTTCAGTGAAGGTATCACACTCTTGAA
TCTCCAATATCTCTACTCTGCGGTTGGTCTTCTTCCTTATTTTGATTGCTATATCTTGAGGGCTAAACTTTCCACAAACGCTTACCCTGCACTGCTTTTGTTCTATCAAA
TGGTCCTCCAACTCTATCAAGAAGACAAGGATTTACATGTCATAAAATACCGAATAGAATCCATTGAAGAGAGACAGAGAAAAAATAAGCTCTTCTTACTTTCCTGTAAC
ATCCATTACAGTCCATGTGAATCCTCAAAACCATCCAGAAAAACTGCCATAGTTGTCAAGGGAAAACAGTTCAATATTGCCAATGAAGAAGAAGAATGGAAAAAGTTGCC
TACAAACTTGAAACGACGTCGTCCGACCAACACTAAAAGACACCCAAAACCACGACCCCCACTCGAAACCGTCTCTACAAAGCCGACAATGACTCCGGTCGAAACGGCAC
GTCCGAATAATCAAACAAACCGCCCAATGCAACGAACTCCCCGCCCAACCCATTCTCCTCCGCCGCGCCGGAGGAGAACCCCATTCCAATCTCGAACAAGTCGTAACACG
GAATCTCATCTTCAAACCCAGCGTTCCCATCCAACTCAAACACGCCAGGAGGAGAAGAAGAAGCAGGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTACAACAAATTTCAGCTTGGTCATAGTTGGATTGGCATTTCCAGGCATTGATGATGAAGGGTCCTTGGATATCATTGTTTTCAGTGAAGGTATCACACTCTTGAA
TCTCCAATATCTCTACTCTGCGGTTGGTCTTCTTCCTTATTTTGATTGCTATATCTTGAGGGCTAAACTTTCCACAAACGCTTACCCTGCACTGCTTTTGTTCTATCAAA
TGGTCCTCCAACTCTATCAAGAAGACAAGGATTTACATGTCATAAAATACCGAATAGAATCCATTGAAGAGAGACAGAGAAAAAATAAGCTCTTCTTACTTTCCTGTAAC
ATCCATTACAGTCCATGTGAATCCTCAAAACCATCCAGAAAAACTGCCATAGTTGTCAAGGGAAAACAGTTCAATATTGCCAATGAAGAAGAAGAATGGAAAAAGTTGCC
TACAAACTTGAAACGACGTCGTCCGACCAACACTAAAAGACACCCAAAACCACGACCCCCACTCGAAACCGTCTCTACAAAGCCGACAATGACTCCGGTCGAAACGGCAC
GTCCGAATAATCAAACAAACCGCCCAATGCAACGAACTCCCCGCCCAACCCATTCTCCTCCGCCGCGCCGGAGGAGAACCCCATTCCAATCTCGAACAAGTCGTAACACG
GAATCTCATCTTCAAACCCAGCGTTCCCATCCAACTCAAACACGCCAGGAGGAGAAGAAGAAGCAGGCATAA
Protein sequenceShow/hide protein sequence
MLTTNFSLVIVGLAFPGIDDEGSLDIIVFSEGITLLNLQYLYSAVGLLPYFDCYILRAKLSTNAYPALLLFYQMVLQLYQEDKDLHVIKYRIESIEERQRKNKLFLLSCN
IHYSPCESSKPSRKTAIVVKGKQFNIANEEEEWKKLPTNLKRRRPTNTKRHPKPRPPLETVSTKPTMTPVETARPNNQTNRPMQRTPRPTHSPPPRRRRTPFQSRTSRNT
ESHLQTQRSHPTQTRQEEKKKQA