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CmoCh13G011000 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G011000
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiondof zinc finger protein 4-like
Genome locationCmo_Chr13:9041440..9041925
RNA-Seq ExpressionCmoCh13G011000
SyntenyCmoCh13G011000
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003851 - Zinc finger, Dof-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584390.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]6.7e-6593.08Show/hide
Query:  MGELGHMDLQDIRSKPWKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDL
        M ELGHMDLQDIRSKPWKCPRC S DTKFCYYNNYN SQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNS K KPK  AAMIVRDSPSSKSNSWKSDL
Subjt:  MGELGHMDLQDIRSKPWKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDL

Query:  EILPSPLRLNQAGDWYGWIETGREAEKGAR
        EILPSPL LNQAGDWYGWIETGREAEKGAR
Subjt:  EILPSPLRLNQAGDWYGWIETGREAEKGAR

XP_004137607.1 dof zinc finger protein DOF1.7 [Cucumis sativus]2.5e-2760.16Show/hide
Query:  DIRSKP----WKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLEILPSP
        D +SKP     +CPRC S  TKFCYYNNYNYSQPRHFCKTCRRYWT+GG+LRN+PVGGG RK+K + K K   RA         S  NS  SDL++L SP
Subjt:  DIRSKP----WKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLEILPSP

Query:  LRL-NQAGDWYGWIETGREAEKG
        L+L NQAGD + W   GRE E G
Subjt:  LRL-NQAGDWYGWIETGREAEKG

XP_008445935.1 PREDICTED: dof zinc finger protein DOF3.4-like [Cucumis melo]3.5e-2959.02Show/hide
Query:  DIRSKP----WKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLEILPSP
        D +SKP     +CPRC S  TKFCYYNNYNYSQPRHFCKTCRRYWT+GG+LRNVPVGGG+RK+K + KPK     A     + +S S    SDL++  SP
Subjt:  DIRSKP----WKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLEILPSP

Query:  LRLNQAGDWYGWIETGREAEKG
        L+LNQ+GD   W   GRE E G
Subjt:  LRLNQAGDWYGWIETGREAEKG

XP_022924220.1 dof zinc finger protein 4-like [Cucurbita moschata]1.2e-93100Show/hide
Query:  MGELGHMDLQDIRSKPWKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDL
        MGELGHMDLQDIRSKPWKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDL
Subjt:  MGELGHMDLQDIRSKPWKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDL

Query:  EILPSPLRLNQAGDWYGWIETGREAEKGARDLDRWIICRRVMKPNEWLRLPVASQSEITTI
        EILPSPLRLNQAGDWYGWIETGREAEKGARDLDRWIICRRVMKPNEWLRLPVASQSEITTI
Subjt:  EILPSPLRLNQAGDWYGWIETGREAEKGARDLDRWIICRRVMKPNEWLRLPVASQSEITTI

XP_023520188.1 dof zinc finger protein DOF3.1-like [Cucurbita pepo subsp. pepo]2.2e-5586.15Show/hide
Query:  MGELGHMDLQDIRSKPWKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDL
        M ELGHMDLQDIRSKPWKCPRC SPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNS K KPK  AAMIVRDSPSSKSNSWKSDL
Subjt:  MGELGHMDLQDIRSKPWKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDL

Query:  EILPSPLRLNQAGDWYGWIETGREAEKGAR
        EILPSPL+LNQ GD          AEKGAR
Subjt:  EILPSPLRLNQAGDWYGWIETGREAEKGAR

TrEMBL top hitse value%identityAlignment
A0A0A0LTJ9 Dof-type domain-containing protein1.2e-2760.16Show/hide
Query:  DIRSKP----WKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLEILPSP
        D +SKP     +CPRC S  TKFCYYNNYNYSQPRHFCKTCRRYWT+GG+LRN+PVGGG RK+K + K K   RA         S  NS  SDL++L SP
Subjt:  DIRSKP----WKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLEILPSP

Query:  LRL-NQAGDWYGWIETGREAEKG
        L+L NQAGD + W   GRE E G
Subjt:  LRL-NQAGDWYGWIETGREAEKG

A0A1S3BDV3 dof zinc finger protein DOF3.4-like1.7e-2959.02Show/hide
Query:  DIRSKP----WKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLEILPSP
        D +SKP     +CPRC S  TKFCYYNNYNYSQPRHFCKTCRRYWT+GG+LRNVPVGGG+RK+K + KPK     A     + +S S    SDL++  SP
Subjt:  DIRSKP----WKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLEILPSP

Query:  LRLNQAGDWYGWIETGREAEKG
        L+LNQ+GD   W   GRE E G
Subjt:  LRLNQAGDWYGWIETGREAEKG

A0A5D3BGN5 Dof zinc finger protein DOF3.4-like1.7e-2959.02Show/hide
Query:  DIRSKP----WKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLEILPSP
        D +SKP     +CPRC S  TKFCYYNNYNYSQPRHFCKTCRRYWT+GG+LRNVPVGGG+RK+K + KPK     A     + +S S    SDL++  SP
Subjt:  DIRSKP----WKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLEILPSP

Query:  LRLNQAGDWYGWIETGREAEKG
        L+LNQ+GD   W   GRE E G
Subjt:  LRLNQAGDWYGWIETGREAEKG

A0A6J1C7U6 dof zinc finger protein DOF5.8-like3.5e-2753.6Show/hide
Query:  DIRSKPWKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLEI-LPSPLRL
        D R     CPRC S DTKFCYYNNYNYSQPRH CKTCRRYWTIGG LRN+PVGG  RK+ NS K KPKP A +  ++S ++ + +   +    L +P +L
Subjt:  DIRSKPWKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLEI-LPSPLRL

Query:  NQ--AGDWYGWIET-GREAEKGARD
        ++  A D+YGWI++ GR    G  D
Subjt:  NQ--AGDWYGWIET-GREAEKGARD

A0A6J1EE71 dof zinc finger protein 4-like5.7e-94100Show/hide
Query:  MGELGHMDLQDIRSKPWKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDL
        MGELGHMDLQDIRSKPWKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDL
Subjt:  MGELGHMDLQDIRSKPWKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDL

Query:  EILPSPLRLNQAGDWYGWIETGREAEKGARDLDRWIICRRVMKPNEWLRLPVASQSEITTI
        EILPSPLRLNQAGDWYGWIETGREAEKGARDLDRWIICRRVMKPNEWLRLPVASQSEITTI
Subjt:  EILPSPLRLNQAGDWYGWIETGREAEKGARDLDRWIICRRVMKPNEWLRLPVASQSEITTI

SwissProt top hitse value%identityAlignment
Q6Z345 Dof zinc finger protein 46.6e-2355.21Show/hide
Query:  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLEILPSPLRLNQAG
        KCPRC S +TKFCYYNNYN SQPRHFCK+CRRYWT GGVLRNVPVGGG RK K S        AA     +P++ +++ K+      S  R +  G
Subjt:  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLEILPSPLRLNQAG

Q8LDR0 Dof zinc finger protein DOF5.41.1e-2276.92Show/hide
Query:  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAA
        KCPRC S +TKFCYYNNYN SQPRHFCK CRRYWT GGVLRNVPVGGG RKAK S K K  P ++
Subjt:  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAA

Q94AR6 Dof zinc finger protein DOF3.11.5e-2262.96Show/hide
Query:  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKS
        KCPRC SP+TKFCYYNNYN SQPRHFCK+CRRYWT GG LRNVPVGGG+R  KN+ K   +  ++     SPS+ S + K+
Subjt:  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKS

Q9LSL6 Dof zinc finger protein DOF5.71.0e-2361.9Show/hide
Query:  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLE
        KCPRC SP+TKFCYYNNY+ SQPRHFCK+CRRYWT GG LRNVP+GGG RK K S     KP ++M    S SS    + S +E
Subjt:  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLE

Q9ZV33 Dof zinc finger protein DOF2.21.9e-2250.47Show/hide
Query:  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRK--------AKNSPKPKPKPRAAMIVRDSPSSKSN---SWKSDLEILPSP
        KCPRC S +TKFCY+NNYN +QPRHFCK CRRYWT GG LRNVPVGGG R+        +K+S   + K   +M+   SP++ SN      S    LP+ 
Subjt:  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRK--------AKNSPKPKPKPRAAMIVRDSPSSKSN---SWKSDLEILPSP

Query:  LRLNQAG
          L Q G
Subjt:  LRLNQAG

Arabidopsis top hitse value%identityAlignment
AT2G28810.1 Dof-type zinc finger DNA-binding family protein1.4e-2350.47Show/hide
Query:  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRK--------AKNSPKPKPKPRAAMIVRDSPSSKSN---SWKSDLEILPSP
        KCPRC S +TKFCY+NNYN +QPRHFCK CRRYWT GG LRNVPVGGG R+        +K+S   + K   +M+   SP++ SN      S    LP+ 
Subjt:  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRK--------AKNSPKPKPKPRAAMIVRDSPSSKSN---SWKSDLEILPSP

Query:  LRLNQAG
          L Q G
Subjt:  LRLNQAG

AT2G28810.2 Dof-type zinc finger DNA-binding family protein1.4e-2350.47Show/hide
Query:  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRK--------AKNSPKPKPKPRAAMIVRDSPSSKSN---SWKSDLEILPSP
        KCPRC S +TKFCY+NNYN +QPRHFCK CRRYWT GG LRNVPVGGG R+        +K+S   + K   +M+   SP++ SN      S    LP+ 
Subjt:  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRK--------AKNSPKPKPKPRAAMIVRDSPSSKSN---SWKSDLEILPSP

Query:  LRLNQAG
          L Q G
Subjt:  LRLNQAG

AT3G21270.1 DOF zinc finger protein 21.0e-2362.96Show/hide
Query:  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKS
        KCPRC SP+TKFCYYNNYN SQPRHFCK+CRRYWT GG LRNVPVGGG+R  KN+ K   +  ++     SPS+ S + K+
Subjt:  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKS

AT5G60850.1 OBF binding protein 48.0e-2476.92Show/hide
Query:  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAA
        KCPRC S +TKFCYYNNYN SQPRHFCK CRRYWT GGVLRNVPVGGG RKAK S K K  P ++
Subjt:  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAA

AT5G65590.1 Dof-type zinc finger DNA-binding family protein7.3e-2561.9Show/hide
Query:  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLE
        KCPRC SP+TKFCYYNNY+ SQPRHFCK+CRRYWT GG LRNVP+GGG RK K S     KP ++M    S SS    + S +E
Subjt:  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAATTAGGGCACATGGATTTGCAAGACATTCGATCCAAGCCATGGAAGTGCCCAAGGTGCGGTTCGCCCGACACCAAATTCTGCTATTACAATAACTACAATTA
CTCTCAGCCTCGCCACTTCTGCAAGACCTGCCGCCGCTACTGGACCATCGGCGGTGTCCTCCGCAACGTTCCTGTTGGCGGCGGAAATCGCAAAGCGAAGAACAGCCCGA
AGCCGAAGCCGAAGCCGAGGGCTGCAATGATCGTGAGAGATTCGCCGTCGTCGAAATCGAATTCGTGGAAGTCCGATTTGGAAATCCTCCCGTCGCCGCTGAGGTTGAAT
CAGGCGGGTGATTGGTACGGTTGGATTGAGACTGGAAGGGAGGCGGAGAAAGGGGCGAGGGATTTGGATCGTTGGATCATTTGCCGACGAGTGATGAAACCGAATGAATG
GTTGAGATTACCGGTGGCGTCGCAATCGGAAATCACAACTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAATTAGGGCACATGGATTTGCAAGACATTCGATCCAAGCCATGGAAGTGCCCAAGGTGCGGTTCGCCCGACACCAAATTCTGCTATTACAATAACTACAATTA
CTCTCAGCCTCGCCACTTCTGCAAGACCTGCCGCCGCTACTGGACCATCGGCGGTGTCCTCCGCAACGTTCCTGTTGGCGGCGGAAATCGCAAAGCGAAGAACAGCCCGA
AGCCGAAGCCGAAGCCGAGGGCTGCAATGATCGTGAGAGATTCGCCGTCGTCGAAATCGAATTCGTGGAAGTCCGATTTGGAAATCCTCCCGTCGCCGCTGAGGTTGAAT
CAGGCGGGTGATTGGTACGGTTGGATTGAGACTGGAAGGGAGGCGGAGAAAGGGGCGAGGGATTTGGATCGTTGGATCATTTGCCGACGAGTGATGAAACCGAATGAATG
GTTGAGATTACCGGTGGCGTCGCAATCGGAAATCACAACTATTTAA
Protein sequenceShow/hide protein sequence
MGELGHMDLQDIRSKPWKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLEILPSPLRLN
QAGDWYGWIETGREAEKGARDLDRWIICRRVMKPNEWLRLPVASQSEITTI