CuGenDBv2

Gene ID	CmoCh13G011160
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Protein of unknown function (DUF1118)
Genome location	Cmo_Chr13:9116446..9117255
RNA-Seq Expression	CmoCh13G011160
Synteny	CmoCh13G011160
Gene Ontology terms	GO:0010027 - thylakoid membrane organization (biological process) GO:0010196 - nonphotochemical quenching (biological process) GO:0045893 - positive regulation of transcription, DNA-templated (biological process) GO:0090391 - granum assembly (biological process) GO:0009515 - granal stacked thylakoid (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR009500 - Protein of unknown function DUF1118

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6584405.1 hypothetical protein SDJN03_20337, partial [Cucurbita argyrosperma subsp. sororia]

2.7e-86

99.46

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Query:  MEVTSFCGSSRAASFVYTYPSKTNSRKQSLDLRSMAIASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSS
        MEVTSFCGSSRAASFVYTYPSKTNSRKQSLDLRSMA+ASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSS
Subjt:  MEVTSFCGSSRAASFVYTYPSKTNSRKQSLDLRSMAIASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSS

Query:  IEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN
        IEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN
Subjt:  IEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN

XP_008451074.1 PREDICTED: uncharacterized protein LOC103492437 [Cucumis melo]

3.8e-72

83.76

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Query:  MEVTSFCGSS-RAASFVYTYPSKTNS-RKQSLDLRSMA----------IASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL
        MEVTSFC SS RAASF+Y+YPS T S RK+ L L SMA             +KK+N+TVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL
Subjt:  MEVTSFCGSS-RAASFVYTYPSKTNS-RKQSLDLRSMA----------IASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL

Query:  SAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN
        SAAEKAGLSLSSIEKLGLLSKAEELG+LSAATDPGTPGALLSLSLGLLLLGPSCVYLVPE+SVWEI LQ AVALVS+VGGSAAFAASNLVSNLQRSN
Subjt:  SAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN

XP_022924182.1 uncharacterized protein LOC111431704 [Cucurbita moschata]

2.1e-86

100

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Query:  MEVTSFCGSSRAASFVYTYPSKTNSRKQSLDLRSMAIASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSS
        MEVTSFCGSSRAASFVYTYPSKTNSRKQSLDLRSMAIASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSS
Subjt:  MEVTSFCGSSRAASFVYTYPSKTNSRKQSLDLRSMAIASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSS

Query:  IEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN
        IEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN
Subjt:  IEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN

XP_023520287.1 uncharacterized protein LOC111783600 [Cucurbita pepo subsp. pepo]

1.1e-82

92.35

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Query:  MEVTSFCGSSRAASFVYTYPSKTNSRKQSLDLRSMA-----------IASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLS
        MEVTSFCGSSRAASFVY+YPSKTNSRKQSLDLRSMA           +ASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLS
Subjt:  MEVTSFCGSSRAASFVYTYPSKTNSRKQSLDLRSMA-----------IASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLS

Query:  AAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN
        AAEKAGLSLSSIEKLG LSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVS+VGGSAAFAASNLVSNLQRSN
Subjt:  AAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN

XP_038893804.1 uncharacterized protein LOC120082623 [Benincasa hispida]

4.4e-76

86.15

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Query:  MEVTSFCGSSRAASFVYTYPSKTNSRKQSLDLRSMA----------IASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSA
        MEV+SFC SSRAASFV++YPSKTNSRK+SL L SMA             +KK+NSTVFPLGEKGPR+SISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSA
Subjt:  MEVTSFCGSSRAASFVYTYPSKTNSRKQSLDLRSMA----------IASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSA

Query:  AEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN
        AEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPE+SVW+IALQ +VALVSVVGGSAAFAASNLVSNLQRSN
Subjt:  AEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQ98 Uncharacterized protein

1.9e-72

83.76

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Query:  MEVTSFCGSS-RAASFVYTYPSKTNS-RKQSLDLRSMA----------IASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL
        MEVTSFC SS RAASF+Y+YPS T S RK+ L L SMA             +KK+N+TVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL
Subjt:  MEVTSFCGSS-RAASFVYTYPSKTNS-RKQSLDLRSMA----------IASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL

Query:  SAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN
        SAAEKAGLSLSSIEKLGLLSKAEELG+LSAATDPGTPGALLSLSLGLLLLGPSCVYLVPE+SVWEI LQ AVALVS+VGGSAAFAASNLVSNLQRSN
Subjt:  SAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN

A0A1S3BQ40 uncharacterized protein LOC103492437

1.9e-72

83.76

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Query:  MEVTSFCGSS-RAASFVYTYPSKTNS-RKQSLDLRSMA----------IASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL
        MEVTSFC SS RAASF+Y+YPS T S RK+ L L SMA             +KK+N+TVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL
Subjt:  MEVTSFCGSS-RAASFVYTYPSKTNS-RKQSLDLRSMA----------IASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL

Query:  SAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN
        SAAEKAGLSLSSIEKLGLLSKAEELG+LSAATDPGTPGALLSLSLGLLLLGPSCVYLVPE+SVWEI LQ AVALVS+VGGSAAFAASNLVSNLQRSN
Subjt:  SAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN

A0A5D3BGQ3 Uncharacterized protein

1.9e-72

83.76

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Query:  MEVTSFCGSS-RAASFVYTYPSKTNS-RKQSLDLRSMA----------IASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL
        MEVTSFC SS RAASF+Y+YPS T S RK+ L L SMA             +KK+N+TVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL
Subjt:  MEVTSFCGSS-RAASFVYTYPSKTNS-RKQSLDLRSMA----------IASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL

Query:  SAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN
        SAAEKAGLSLSSIEKLGLLSKAEELG+LSAATDPGTPGALLSLSLGLLLLGPSCVYLVPE+SVWEI LQ AVALVS+VGGSAAFAASNLVSNLQRSN
Subjt:  SAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN

A0A6J1CAU4 uncharacterized protein LOC111009021

2.7e-71

82.09

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Query:  MEVTSFCGSSRAASFVYTYPSKTNSRKQS------LDLRSMA----------IASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEK
        MEVTSFC SSR  SFVY+YP KT SR  +      L +RSMA             +KK+NSTVFPLGEKGPRSSISLSTSP IKLLTRVEQLKLLSKAEK
Subjt:  MEVTSFCGSSRAASFVYTYPSKTNSRKQS------LDLRSMA----------IASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEK

Query:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRS
        AGLLSAAEKAGLSLSSIEKLGLLSKAEELG+LSAATDPGTPGALLSLSLGLLLLGPSCVYLVPE+SVWEI LQAAVALVSVVGGSAAFAASNLVSNLQRS
Subjt:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRS

Query:  N
        N
Subjt:  N

A0A6J1E885 uncharacterized protein LOC111431704

1.0e-86

100

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Query:  MEVTSFCGSSRAASFVYTYPSKTNSRKQSLDLRSMAIASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSS
        MEVTSFCGSSRAASFVYTYPSKTNSRKQSLDLRSMAIASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSS
Subjt:  MEVTSFCGSSRAASFVYTYPSKTNSRKQSLDLRSMAIASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSS

Query:  IEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN
        IEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN
Subjt:  IEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G74730.1 Protein of unknown function (DUF1118)

3.8e-09

34.84

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Query:  MAIASTKKVNSTVFPLGEKGPRSSISLSTSPPIK--LLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKAEELGILSAATD-PGT-PGALLS
        +A+A  KKVN       ++   + +    S  I   +  ++E+ K+LS  EK+GLLS AE  GL+LSS+EKL + SKAE+LG+LS   +  GT P  L S
Subjt:  MAIASTKKVNSTVFPLGEKGPRSSISLSTSPPIK--LLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKAEELGILSAATD-PGT-PGALLS

Query:  LSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN
         +L  L      V L+P++S   +  QA +A    + G      S ++  LQ ++
Subjt:  LSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN

AT5G08050.1 Protein of unknown function (DUF1118)

1.6e-39

62.84

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Query:  TVFPLGEKGPRSSISLST--------SPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLL
        TV  +  K P  S +  T        +P +KLLTRVEQLKLL+KAEKAGLLS AEK+G SLS+IE+LGLL+KAEE G+LSAAT+P TPG L +LSLGLLL
Subjt:  TVFPLGEKGPRSSISLST--------SPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLL

Query:  LGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN
        LGP   Y+VPE+  WE+ +Q  VAL+SV+GGSAAFAAS  VSNLQ+S+
Subjt:  LGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAGGTCACTTCTTTCTGTGGCAGCAGCAGAGCAGCTTCGTTCGTCTACACCTATCCATCCAAAACGAATTCAAGAAAACAATCTCTTGATCTACGCTCCATGGCCAT
CGCCTCCACCAAGAAGGTTAACTCGACGGTGTTCCCTCTCGGGGAGAAAGGACCGAGGAGTAGCATCTCGCTCTCGACCTCGCCGCCGATTAAACTACTGACGAGGGTGG
AGCAATTGAAGCTACTGAGCAAGGCGGAGAAGGCTGGCCTGCTGTCTGCGGCGGAGAAGGCCGGGTTGTCTCTGTCGTCGATTGAGAAATTAGGGCTTCTGTCGAAGGCT
GAGGAATTGGGGATTTTATCGGCGGCGACGGATCCGGGAACTCCCGGGGCGCTACTTAGTCTGAGCTTGGGGCTGTTGCTATTGGGGCCTTCGTGCGTGTATTTGGTGCC
GGAGGAGAGTGTTTGGGAAATCGCGTTGCAGGCGGCGGTGGCTCTGGTCTCAGTCGTGGGCGGCTCAGCGGCATTTGCTGCGTCGAATTTGGTGTCCAATTTGCAGAGAT
CCAATTGA

mRNA sequence

Show/hide mRNA sequence

TTCAAATATCTGAATCCTCAGCCTCTCCATCACTCATGTCCATGGTGCAGGCCTCTGCAATTCTCTCAGTCAGATTCAGCCCTAACCATCGCCGTTCTTCAGAGCTCATA
CACACTCCCCGGCTAGAGACGCTCAGCTATGGAGGTCACTTCTTTCTGTGGCAGCAGCAGAGCAGCTTCGTTCGTCTACACCTATCCATCCAAAACGAATTCAAGAAAAC
AATCTCTTGATCTACGCTCCATGGCCATCGCCTCCACCAAGAAGGTTAACTCGACGGTGTTCCCTCTCGGGGAGAAAGGACCGAGGAGTAGCATCTCGCTCTCGACCTCG
CCGCCGATTAAACTACTGACGAGGGTGGAGCAATTGAAGCTACTGAGCAAGGCGGAGAAGGCTGGCCTGCTGTCTGCGGCGGAGAAGGCCGGGTTGTCTCTGTCGTCGAT
TGAGAAATTAGGGCTTCTGTCGAAGGCTGAGGAATTGGGGATTTTATCGGCGGCGACGGATCCGGGAACTCCCGGGGCGCTACTTAGTCTGAGCTTGGGGCTGTTGCTAT
TGGGGCCTTCGTGCGTGTATTTGGTGCCGGAGGAGAGTGTTTGGGAAATCGCGTTGCAGGCGGCGGTGGCTCTGGTCTCAGTCGTGGGCGGCTCAGCGGCATTTGCTGCG
TCGAATTTGGTGTCCAATTTGCAGAGATCCAATTGA

Protein sequence

Show/hide protein sequence

MEVTSFCGSSRAASFVYTYPSKTNSRKQSLDLRSMAIASTKKVNSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKA
EELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEESVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSN

CmoCh13G011160 (gene) of Cucurbita moschata (Rifu) v1 genome