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CmoCh13G011370 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh13G011370
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionmyosin heavy chain, embryonic smooth muscle isoform-like isoform X2
Genome locationCmo_Chr13:9221719..9226118
RNA-Seq ExpressionCmoCh13G011370
SyntenyCmoCh13G011370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022923655.1 myosin heavy chain, embryonic smooth muscle isoform-like isoform X1 [Cucurbita moschata]1.1e-5290.37Show/hide
Query:  MFLIVIELVPRIQIRSAKLRSYRYSQ-------------VLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELI
        MFLIVIELVPRIQIRSAKLRSYRYSQ             VLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELI
Subjt:  MFLIVIELVPRIQIRSAKLRSYRYSQ-------------VLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELI

Query:  RRLELHVKSLSEAREEDRLCIENLEKRLTNCTQEI
        RRLELHVKSLSEAREEDRLCIENLEKRLTNCTQEI
Subjt:  RRLELHVKSLSEAREEDRLCIENLEKRLTNCTQEI
XP_022923656.1 myosin heavy chain, embryonic smooth muscle isoform-like isoform X2 [Cucurbita moschata]1.8e-55100Show/hide
Query:  MFLIVIELVPRIQIRSAKLRSYRYSQVLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKSLSEA
        MFLIVIELVPRIQIRSAKLRSYRYSQVLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKSLSEA
Subjt:  MFLIVIELVPRIQIRSAKLRSYRYSQVLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKSLSEA

Query:  REEDRLCIENLEKRLTNCTQEI
        REEDRLCIENLEKRLTNCTQEI
Subjt:  REEDRLCIENLEKRLTNCTQEI
XP_022923661.1 myosin heavy chain, embryonic smooth muscle isoform-like isoform X5 [Cucurbita moschata]1.1e-5290.37Show/hide
Query:  MFLIVIELVPRIQIRSAKLRSYRYSQ-------------VLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELI
        MFLIVIELVPRIQIRSAKLRSYRYSQ             VLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELI
Subjt:  MFLIVIELVPRIQIRSAKLRSYRYSQ-------------VLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELI

Query:  RRLELHVKSLSEAREEDRLCIENLEKRLTNCTQEI
        RRLELHVKSLSEAREEDRLCIENLEKRLTNCTQEI
Subjt:  RRLELHVKSLSEAREEDRLCIENLEKRLTNCTQEI
XP_023519169.1 myosin heavy chain, fast skeletal muscle-like isoform X1 [Cucurbita pepo subsp. pepo]2.2e-4890.48Show/hide
Query:  MFLIVIELVPRIQIRS----AKLRSYRYSQVLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKS
        MFLIVIELVPRIQIRS      + S  + QVLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKS
Subjt:  MFLIVIELVPRIQIRS----AKLRSYRYSQVLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKS

Query:  LSEAREEDRLCIENLEKRLTNCTQEI
        LSEAREEDRLCIENLEKRLTNCTQEI
Subjt:  LSEAREEDRLCIENLEKRLTNCTQEI
XP_023519173.1 shootin-1-like isoform X3 [Cucurbita pepo subsp. pepo]2.2e-4890.48Show/hide
Query:  MFLIVIELVPRIQIRS----AKLRSYRYSQVLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKS
        MFLIVIELVPRIQIRS      + S  + QVLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKS
Subjt:  MFLIVIELVPRIQIRS----AKLRSYRYSQVLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKS

Query:  LSEAREEDRLCIENLEKRLTNCTQEI
        LSEAREEDRLCIENLEKRLTNCTQEI
Subjt:  LSEAREEDRLCIENLEKRLTNCTQEI
TrEMBL top hitse value%identityAlignment
A0A6J1E7C9 myosin heavy chain, embryonic smooth muscle isoform-like isoform X28.9e-56100Show/hide
Query:  MFLIVIELVPRIQIRSAKLRSYRYSQVLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKSLSEA
        MFLIVIELVPRIQIRSAKLRSYRYSQVLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKSLSEA
Subjt:  MFLIVIELVPRIQIRSAKLRSYRYSQVLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKSLSEA

Query:  REEDRLCIENLEKRLTNCTQEI
        REEDRLCIENLEKRLTNCTQEI
Subjt:  REEDRLCIENLEKRLTNCTQEI
A0A6J1E7D3 myosin heavy chain, embryonic smooth muscle isoform-like isoform X55.4e-5390.37Show/hide
Query:  MFLIVIELVPRIQIRSAKLRSYRYSQ-------------VLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELI
        MFLIVIELVPRIQIRSAKLRSYRYSQ             VLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELI
Subjt:  MFLIVIELVPRIQIRSAKLRSYRYSQ-------------VLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELI

Query:  RRLELHVKSLSEAREEDRLCIENLEKRLTNCTQEI
        RRLELHVKSLSEAREEDRLCIENLEKRLTNCTQEI
Subjt:  RRLELHVKSLSEAREEDRLCIENLEKRLTNCTQEI
A0A6J1ECH0 myosin heavy chain, embryonic smooth muscle isoform-like isoform X15.4e-5390.37Show/hide
Query:  MFLIVIELVPRIQIRSAKLRSYRYSQ-------------VLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELI
        MFLIVIELVPRIQIRSAKLRSYRYSQ             VLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELI
Subjt:  MFLIVIELVPRIQIRSAKLRSYRYSQ-------------VLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELI

Query:  RRLELHVKSLSEAREEDRLCIENLEKRLTNCTQEI
        RRLELHVKSLSEAREEDRLCIENLEKRLTNCTQEI
Subjt:  RRLELHVKSLSEAREEDRLCIENLEKRLTNCTQEI
A0A6J1KIY9 shootin-1-like isoform X43.4e-4788.89Show/hide
Query:  MFLIVIELVPRIQIRS----AKLRSYRYSQVLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKS
        MFLIVIELVPRIQIRS      + S  + QVLAPVHSSKSKDFVSPMLSRRSSS SSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKS
Subjt:  MFLIVIELVPRIQIRS----AKLRSYRYSQVLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKS

Query:  LSEAREEDRLCIENLEKRLTNCTQEI
        LSEAREEDRLCIENLE+RLTNCTQEI
Subjt:  LSEAREEDRLCIENLEKRLTNCTQEI
A0A6J1KKK8 myosin-13-like isoform X13.4e-4788.89Show/hide
Query:  MFLIVIELVPRIQIRS----AKLRSYRYSQVLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKS
        MFLIVIELVPRIQIRS      + S  + QVLAPVHSSKSKDFVSPMLSRRSSS SSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKS
Subjt:  MFLIVIELVPRIQIRS----AKLRSYRYSQVLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKS

Query:  LSEAREEDRLCIENLEKRLTNCTQEI
        LSEAREEDRLCIENLE+RLTNCTQEI
Subjt:  LSEAREEDRLCIENLEKRLTNCTQEI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G07890.1 myosin heavy chain-related9.8e-1552.44Show/hide
Query:  SPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKSLSEAREEDRLCIENLEKRLTNCTQEI
        S   S RS   +S D+E+L++I T  R+L+K+KD L +S+P S EL+RRLELH KSLSE+R ED   I+ +EK L NC +EI
Subjt:  SPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKSLSEAREEDRLCIENLEKRLTNCTQEI
AT5G07890.3 myosin heavy chain-related9.8e-1552.44Show/hide
Query:  SPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKSLSEAREEDRLCIENLEKRLTNCTQEI
        S   S RS   +S D+E+L++I T  R+L+K+KD L +S+P S EL+RRLELH KSLSE+R ED   I+ +EK L NC +EI
Subjt:  SPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKSLSEAREEDRLCIENLEKRLTNCTQEI
AT5G61200.3 FUNCTIONS IN: molecular_function unknown1.8e-1350.56Show/hide
Query:  SKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKSLSEAREEDRLCIENLEKRLTNCTQEI
        S S+D  S   S RS   +S D +EL++I +RC +L++EK+ L +S+ QS EL+RRLEL+  SLSE+R ED+  I+ LEK L NC QEI
Subjt:  SKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKSLSEAREEDRLCIENLEKRLTNCTQEI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTTGATTGTTATTGAGTTGGTTCCGAGAATTCAAATTCGATCTGCCAAGTTACGAAGTTATCGATATTCTCAGGTACTTGCCCCTGTGCATTCCTCTAAGTCGAA
GGATTTTGTTTCACCAATGTTGAGTCGCAGGAGCAGTAGCTATAGTTCATCTGATTTAGAGGAACTTATAGAGATTGAGACAAGATGTCGGCAGCTAAAGAAAGAAAAGG
ACACACTAATAGATTCACGGCCTCAAAGCTTTGAATTGATAAGGCGACTAGAACTACATGTGAAATCCTTATCAGAAGCACGCGAGGAAGACAGGCTTTGCATTGAAAAC
TTGGAGAAGCGGTTAACAAACTGCACTCAGGAAATAGGATCAATTATGTTTAAGGAACACAGAATTAAACTACCTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATCAATGTTGATGCATGTTTTTGATTGTTATTGAGTTGGTTCCGAGAATTCAAATTCGATCTGCCAAGTTACGAAGTTATCGATATTCTCAGGTACTTGCCCCTGTGCAT
TCCTCTAAGTCGAAGGATTTTGTTTCACCAATGTTGAGTCGCAGGAGCAGTAGCTATAGTTCATCTGATTTAGAGGAACTTATAGAGATTGAGACAAGATGTCGGCAGCT
AAAGAAAGAAAAGGACACACTAATAGATTCACGGCCTCAAAGCTTTGAATTGATAAGGCGACTAGAACTACATGTGAAATCCTTATCAGAAGCACGCGAGGAAGACAGGC
TTTGCATTGAAAACTTGGAGAAGCGGTTAACAAACTGCACTCAGGAAATAGGATCAATTATGTTTAAGGAACACAGAATTAAACTACCTGGTTGATCACATTGAAAACCT
CGAATTTAAATTAGTTCACATGGAGCGTTTGCAAGTAAAGGCTGGCAAGTTAGAGGAAGAGGTGAAGCGTTCAAACTTAGAGTCCCTCTTCTTGATGCAGAAATTGGATG
ACAAGGAAAAGAAGCTACGAGAATCAAATTCCTATATAGAAAAACTTGAGGAGTCCATCTCATCTATGACATTGGAGTCTCAATGTGAAATTGAGATTATGAAATTGGAT
ATGGTGGCCATGGAGCAGCGTTTCTTAGAAACCAAGAAAGTTCAGGAAGAGGCTCTTCATCTGAATGATAGAATGGATAGATTGATTCGGCAGCTTCAGAATGCACAGAA
AAATATCGAGTCTCTGGAGAAAGAAAAAAAGGAACTTCAAAGAGAGCTGGATATGTCAACTAAAAATGCCTCCACATTTTGTCGAAGTGTTGAGGAATTGATTGAAAACA
AGGAAAGATCACAAAATACTGTGTGTTTCTCAAATGTCCGGGATAGCAAGTTGACATCACTACTTGAGACTAGTTGTGGCGAACTCTTGGGCCATCTTATTCCAAAATTA
GCAGTTGCACTATTTGCAGATGCAAATTCAGAAGTCAAAATGAATGTGATGGCAAAGCAGATACAAGATTATGAACTTCTTGTGAATCAACTGAAGGAGGAGTTAAGAGA
GGAGAAGTTGAAAGCAAAAGAAGAAGCAGAGGACCTTGCTCAAGAAATGGCTGAGCTAAGGTACCAAATTACTGGTTTGCTTGAAGAAGAGTGCAAGCGCCGGGCTTGCA
TTGAACAGGCGTCTTTACAGAGAATTTCTCAGTTAGAGGCACAGGTTCTAAAAGAACGGAACAGATCATTTGCTGTCGCAAGGTGCATGTGCGAGATATAGTAGTTGGTG
TATAAATTAAAAGCTGCTTGAGGAAGAATGTGAATCAGAGATGTTGTCGCAAATGACTCCTATATTTTCCTCGTGCATTGTTGCTACAATCAAGAATATGAAGTACCTTA
GCTTTGCGCAGTTCTTTCTGGCAGCTCTGATCCTATATTTCTGATCAGAGTGCCTCCTTCTCATGAGTTATGTGATGAAAACTTGTTTGAATTAACATAATGTCCTCACT
GTTGTAGATGTATATGTATATGTATTTGTATTTGTATTTGAAGCAAGACAAGAATGCTGTATTTGTGCATTTTGCAATATGGGAAGTTTTGTAGGCGCCCATTCCTTGTT
TTAATTCCCACATTGCTTCTACTCATCTTGTTTTGCCATAAATTAGCTCAGTGGCAACAATTAAT
Protein sequenceShow/hide protein sequence
MFLIVIELVPRIQIRSAKLRSYRYSQVLAPVHSSKSKDFVSPMLSRRSSSYSSSDLEELIEIETRCRQLKKEKDTLIDSRPQSFELIRRLELHVKSLSEAREEDRLCIEN
LEKRLTNCTQEIGSIMFKEHRIKLPG