CuGenDBv2

Gene ID	CmoCh13G011680
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	UPF0426 protein At1g28150, chloroplastic
Genome location	Cmo_Chr13:9360951..9363517
RNA-Seq Expression	CmoCh13G011680
Synteny	CmoCh13G011680
Gene Ontology terms	GO:0043086 - negative regulation of catalytic activity (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0030599 - pectinesterase activity (molecular function) GO:0046910 - pectinesterase inhibitor activity (molecular function)
InterPro domains	IPR040278 - UPF0426 protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6584446.1 BTB/POZ and TAZ domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]

4.5e-56

97.41

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Query:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAGLLLHSSSTASVLLGGMGKFREGNRHSIF+PKKPMRAN LRLGCSNSTN ICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGITEEVDTQGS
        TVESAGITEEVDTQGS
Subjt:  TVESAGITEEVDTQGS

KAG7020036.1 UPF0426 protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-62

97.66

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Query:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAGLLLHSSSTASVLLGGMGKFREGNRHSIF+PKKPMRAN LRLGCSNSTN ICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGITEEVDTQGSVQEDGPTEIEIE
        TVESAGITEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGITEEVDTQGSVQEDGPTEIEIE

XP_022924196.1 UPF0426 protein At1g28150, chloroplastic [Cucurbita moschata]

1.2e-64

100

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Query:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGITEEVDTQGSVQEDGPTEIEIE
        TVESAGITEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGITEEVDTQGSVQEDGPTEIEIE

XP_023000721.1 UPF0426 protein At1g28150, chloroplastic [Cucurbita maxima]

2.1e-61

96.09

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Query:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAGLLLHSSSTA VLLGGMGKFREGNRHSIFSPKKPMRAN LRLGC+NSTN ICAFLF PLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGITEEVDTQGSVQEDGPTEIEIE
        TVESAGITEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGITEEVDTQGSVQEDGPTEIEIE

XP_023518976.1 UPF0426 protein At1g28150, chloroplastic [Cucurbita pepo subsp. pepo]

5.0e-63

98.44

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Query:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAGLLLHSSSTASVLLGGMGKFREGNRH IFSPKKPMRAN LRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGITEEVDTQGSVQEDGPTEIEIE
        TVESAGITEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGITEEVDTQGSVQEDGPTEIEIE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LT92 Uncharacterized protein

9.9e-49

80.47

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Query:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MA LLLHSSSTASVL G MGK +  N +SI S KKP+R++  RLG +NSTNGI AF FNP+ DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGITEEVDTQGSVQEDGPTEIEIE
        TVESAG+ EEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGITEEVDTQGSVQEDGPTEIEIE

A0A1S3AZP7 UPF0426 protein At1g28150, chloroplastic

1.6e-51

83.59

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Query:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MA LLLHSSSTASVL G MGK +  + HSI S KKPMR++ LRLG +NSTNGI AF FNP+EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGITEEVDTQGSVQEDGPTEIEIE
        TVESAG+TEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGITEEVDTQGSVQEDGPTEIEIE

A0A5D3BGH6 UPF0426 protein

1.6e-51

83.59

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Query:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MA LLLHSSSTASVL G MGK +  + HSI S KKPMR++ LRLG +NSTNGI AF FNP+EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGITEEVDTQGSVQEDGPTEIEIE
        TVESAG+TEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGITEEVDTQGSVQEDGPTEIEIE

A0A6J1E8W6 UPF0426 protein At1g28150, chloroplastic

5.8e-65

100

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Query:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGITEEVDTQGSVQEDGPTEIEIE
        TVESAGITEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGITEEVDTQGSVQEDGPTEIEIE

A0A6J1KGM3 UPF0426 protein At1g28150, chloroplastic

1.0e-61

96.09

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Query:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAGLLLHSSSTA VLLGGMGKFREGNRHSIFSPKKPMRAN LRLGC+NSTN ICAFLF PLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGITEEVDTQGSVQEDGPTEIEIE
        TVESAGITEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGITEEVDTQGSVQEDGPTEIEIE

SwissProt top hits

e value

%identity

Alignment

P74786 UPF0426 protein ssl0294

6.9e-07

40.3

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Query:  PVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITE--EVDTQGSVQEDGPTEIEIE
        PV +E  ++P+AFAGG  +G+LRL L +DPLK+W++K     G+T+    D   + Q++ P  I+I+
Subjt:  PVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITE--EVDTQGSVQEDGPTEIEIE

Q9FZ89 UPF0426 protein At1g28150, chloroplastic

3.5e-19

64.86

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Query:  FNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGIT-EEVDTQGSV--QEDGPTEIEIE
        FN  ++P++ EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++GIT EEVD  G V   ED P +IEIE
Subjt:  FNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGIT-EEVDTQGSV--QEDGPTEIEIE

Arabidopsis top hits

e value

%identity

Alignment

AT1G28150.1 unknown protein

2.5e-20

64.86

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Query:  FNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGIT-EEVDTQGSV--QEDGPTEIEIE
        FN  ++P++ EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++GIT EEVD  G V   ED P +IEIE
Subjt:  FNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGIT-EEVDTQGSV--QEDGPTEIEIE

Sequences

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CDS sequence

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ATGGCCGGTCTTCTTCTCCACTCCTCTTCAACTGCCAGCGTTCTGCTTGGAGGAATGGGGAAATTTAGGGAAGGGAATCGTCATTCGATTTTTTCGCCCAAGAAACCTAT
GCGTGCTAACCGCCTTCGTCTCGGCTGCAGTAATTCAACGAATGGCATCTGCGCTTTCCTTTTCAATCCTTTGGAGGATCCTGTTGTCAAAGAAGCTCTTAAGGAGCCAG
TTGCGTTCGCAGGTGGGCTATTTGCTGGGCTTCTAAGGCTTGATTTGAACGAAGATCCATTAAAGGAATGGGTTAAGAAGACAGTAGAATCTGCAGGAATCACAGAGGAA
GTTGACACCCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATCGAGATTGAATGA

mRNA sequence

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ATGTAGGAAGGCAACAAGTCCAAGTGAGTGTTTCTGGAAATGCTTGGCCTCTTGCAAGAAGCAAACGAGGGGGAGTTTTAAGCCATTAACTCATTTCTAACGCCAATATC
TTCATCCTCTTCTTCCATCCGAAGCAGCTCCATTTGCGTCATCGGAGACTCTCATCCATGGCCGGTCTTCTTCTCCACTCCTCTTCAACTGCCAGCGTTCTGCTTGGAGG
AATGGGGAAATTTAGGGAAGGGAATCGTCATTCGATTTTTTCGCCCAAGAAACCTATGCGTGCTAACCGCCTTCGTCTCGGCTGCAGTAATTCAACGAATGGCATCTGCG
CTTTCCTTTTCAATCCTTTGGAGGATCCTGTTGTCAAAGAAGCTCTTAAGGAGCCAGTTGCGTTCGCAGGTGGGCTATTTGCTGGGCTTCTAAGGCTTGATTTGAACGAA
GATCCATTAAAGGAATGGGTTAAGAAGACAGTAGAATCTGCAGGAATCACAGAGGAAGTTGACACCCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATCGAGATTGA
ATGATCCCATGAATATAAACTGGAAAAGTGGGGATAAAAGGGTATCTGATCTGATTCGTCTCAATATTACTATGGCTCCCTTGATTTAGAATAAGAAATGAAATGGTTTA
GGAGTTACCCCCTTTTCATAATCCAAATACTCTACGACTTCCTCTAAAAATACTTCTCGATTCAGAAGGAAACGCATCATTAGCGTTTACATATTTTTGCAAAGTACTTT
TACACCAACATACGGCTGCACATACTAGTTTTTATGTGAATTTTTTATGGAGGAAGCAAATGCCCATAGAACACAAGGACTTGGCTACTAAAACATCAAGTATAGGACCA
TCAGTGATTTGCGTCATTCGGTTCACATAATCGAGTTCAAGCCTTAAAAAAACTTTGAAGTTCTTGCACCTCTTGTCCA

Protein sequence

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MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEE
VDTQGSVQEDGPTEIEIE

CmoCh13G011680 (gene) of Cucurbita moschata (Rifu) v1 genome