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CmoCh14G001390 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G001390
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr14:613729..614671
RNA-Seq ExpressionCmoCh14G001390
SyntenyCmoCh14G001390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580541.1 E3 ubiquitin-protein ligase PRT6, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2459.52Show/hide
Query:  NFHINSRRAVKEGLMSFLSSGMMSKPLRSNLLVFKNPYSYRTNSRAQVFSE-VRNGPLFSCVAV--GSQWPRGYQRCI--ITFQCAVLAKHCFGVAFISE
        +FHINSRRAVKEGLMSFLSSGMMSKPL     V               F E V     FSC ++  G +WP  +  C   +     ++AKHCFGVAFISE
Subjt:  NFHINSRRAVKEGLMSFLSSGMMSKPLRSNLLVFKNPYSYRTNSRAQVFSE-VRNGPLFSCVAV--GSQWPRGYQRCI--ITFQCAVLAKHCFGVAFISE

Query:  SRPLASFYLEGGDGSGGHFVLSNLAV
        SRPLASFYLEGGDGSGGHFVLSNLAV
Subjt:  SRPLASFYLEGGDGSGGHFVLSNLAV
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAGATTTTGCACTTACCTGTTATAGTTCATGCTGAGTTCCTTGTCCTAGTTTGCCTAGCAGCGAATTTTCATATCAATTCTAGAAGGGCTGTAAAGGAGGGATT
AATGAGCTTTTTAAGTTCAGGCATGATGAGTAAGCCTTTGCGTTCCAATTTATTGGTTTTCAAGAATCCGTACTCCTACAGAACGAATTCTCGTGCACAAGTCTTTTCAG
AGGTGAGAAATGGCCCTTTGTTTTCATGTGTTGCAGTCGGTAGCCAGTGGCCCAGAGGATATCAAAGATGCATCATCACCTTTCAATGTGCAGTGTTGGCAAAGCATTGT
TTTGGAGTTGCCTTCATTTCTGAATCAAGGCCGTTGGCATCTTTCTATTTGGAGGGTGGAGATGGGAGTGGTGGCCATTTTGTTCTGTCAAATCTGGCCGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAGATTTTGCACTTACCTGTTATAGTTCATGCTGAGTTCCTTGTCCTAGTTTGCCTAGCAGCGAATTTTCATATCAATTCTAGAAGGGCTGTAAAGGAGGGATT
AATGAGCTTTTTAAGTTCAGGCATGATGAGTAAGCCTTTGCGTTCCAATTTATTGGTTTTCAAGAATCCGTACTCCTACAGAACGAATTCTCGTGCACAAGTCTTTTCAG
AGGTGAGAAATGGCCCTTTGTTTTCATGTGTTGCAGTCGGTAGCCAGTGGCCCAGAGGATATCAAAGATGCATCATCACCTTTCAATGTGCAGTGTTGGCAAAGCATTGT
TTTGGAGTTGCCTTCATTTCTGAATCAAGGCCGTTGGCATCTTTCTATTTGGAGGGTGGAGATGGGAGTGGTGGCCATTTTGTTCTGTCAAATCTGGCCGTATGA
Protein sequenceShow/hide protein sequence
MVQILHLPVIVHAEFLVLVCLAANFHINSRRAVKEGLMSFLSSGMMSKPLRSNLLVFKNPYSYRTNSRAQVFSEVRNGPLFSCVAVGSQWPRGYQRCIITFQCAVLAKHC
FGVAFISESRPLASFYLEGGDGSGGHFVLSNLAV