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CmoCh14G001650 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G001650
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNAC domain-containing protein 12-like
Genome locationCmo_Chr14:742172..746591
RNA-Seq ExpressionCmoCh14G001650
SyntenyCmoCh14G001650
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009299 - mRNA transcription (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003441 - NAC domain
IPR036093 - NAC domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588734.1 hypothetical protein SDJN03_17299, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1363.49Show/hide
Query:  RKVGLNGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVNANDDDCSWIMHEYTLDPTVL
        RKV  NG TWSG ++G +VFSS NN  IG+IKRFHYE      AND+DCSWIM EYT+DPT +
Subjt:  RKVGLNGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVNANDDDCSWIMHEYTLDPTVL

XP_022934631.1 NAC domain-containing protein 12-like [Cucurbita moschata]2.1e-3181.4Show/hide
Query:  FWRLRKEEPKTIINTIQILKRKVGLNGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVNANDDDCSWIMHEYTLDPTVLTNG
        F  L+K++ + I        RKVGLNGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVNANDDDCSWIMHEYTLDPTVLTNG
Subjt:  FWRLRKEEPKTIINTIQILKRKVGLNGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVNANDDDCSWIMHEYTLDPTVLTNG

XP_022934631.1 NAC domain-containing protein 12-like [Cucurbita moschata]6.9e-03100Show/hide
Query:  VRELKVAKNSEDNREGWERDQNEL
        VRELKVAKNSEDNREGWERDQNEL
Subjt:  VRELKVAKNSEDNREGWERDQNEL

XP_022934631.1 NAC domain-containing protein 12-like [Cucurbita moschata]2.1e-3181.4Show/hide
Query:  FWRLRKEEPKTIINTIQILKRKVGLNGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVNANDDDCSWIMHEYTLDPTVLTNG
        F  L+K++ + I        RKVGLNGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVNANDDDCSWIMHEYTLDPTVLTNG
Subjt:  FWRLRKEEPKTIINTIQILKRKVGLNGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVNANDDDCSWIMHEYTLDPTVLTNG

XP_023528741.1 transcription factor JUNGBRUNNEN 1-like [Cucurbita pepo subsp. pepo]3.5e-3180.23Show/hide
Query:  FWRLRKEEPKTIINTIQILKRKVGLNGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVNANDDDCSWIMHEYTLDPTVLTNG
        F  L+K++ + I        RKVG+NGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVNANDDDCSWIMHEYTLDPTVLTNG
Subjt:  FWRLRKEEPKTIINTIQILKRKVGLNGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVNANDDDCSWIMHEYTLDPTVLTNG

XP_023528741.1 transcription factor JUNGBRUNNEN 1-like [Cucurbita pepo subsp. pepo]6.9e-03100Show/hide
Query:  VRELKVAKNSEDNREGWERDQNEL
        VRELKVAKNSEDNREGWERDQNEL
Subjt:  VRELKVAKNSEDNREGWERDQNEL

XP_023528741.1 transcription factor JUNGBRUNNEN 1-like [Cucurbita pepo subsp. pepo]4.6e-3180.23Show/hide
Query:  FWRLRKEEPKTIINTIQILKRKVGLNGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVNANDDDCSWIMHEYTLDPTVLTNG
        F  L+K++ + I        RKVGLNGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVN+NDDDCSWIMHEYTLDPTVLTNG
Subjt:  FWRLRKEEPKTIINTIQILKRKVGLNGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVNANDDDCSWIMHEYTLDPTVLTNG

TrEMBL top hitse value%identityAlignment
A0A1S3B8F1 NAC domain-containing protein 105-like3.7e-1041.57Show/hide
Query:  FWRLRKEEPKTIINTIQILKRKVGLNGGTWSGESKGHKVFSSA-NNAPIGTIKRFHYETSGGVNAND-DDCSWIMHEYTLDPTVLTNGV
        F  L+K++ + I        RKVG NG TWS E++  +VFSS  ++  +G++KRFHY+     +  D +DC+WIM+EYTLDP+++  G+
Subjt:  FWRLRKEEPKTIINTIQILKRKVGLNGGTWSGESKGHKVFSSA-NNAPIGTIKRFHYETSGGVNAND-DDCSWIMHEYTLDPTVLTNGV

A0A5A7TSB0 NAC domain-containing protein 105-like protein3.7e-1041.57Show/hide
Query:  FWRLRKEEPKTIINTIQILKRKVGLNGGTWSGESKGHKVFSSA-NNAPIGTIKRFHYETSGGVNAND-DDCSWIMHEYTLDPTVLTNGV
        F  L+K++ + I        RKVG NG TWS E++  +VFSS  ++  +G++KRFHY+     +  D +DC+WIM+EYTLDP+++  G+
Subjt:  FWRLRKEEPKTIINTIQILKRKVGLNGGTWSGESKGHKVFSSA-NNAPIGTIKRFHYETSGGVNAND-DDCSWIMHEYTLDPTVLTNGV

A0A5A7UPM7 NAC domain-containing protein 105-like protein4.8e-1056.34Show/hide
Query:  RKVGLNGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVNANDDDC----SWIMHEYTLDPTVLTNGV
        RKVG NG  WSGESK  KVFS  +N  +GT KRFHYE S       DDC    SWIM+EYTL P ++  GV
Subjt:  RKVGLNGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVNANDDDC----SWIMHEYTLDPTVLTNGV

A0A6J1F2C3 NAC domain-containing protein 12-like1.0e-3181.4Show/hide
Query:  FWRLRKEEPKTIINTIQILKRKVGLNGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVNANDDDCSWIMHEYTLDPTVLTNG
        F  L+K++ + I        RKVGLNGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVNANDDDCSWIMHEYTLDPTVLTNG
Subjt:  FWRLRKEEPKTIINTIQILKRKVGLNGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVNANDDDCSWIMHEYTLDPTVLTNG

A0A6J1F2C3 NAC domain-containing protein 12-like3.4e-03100Show/hide
Query:  VRELKVAKNSEDNREGWERDQNEL
        VRELKVAKNSEDNREGWERDQNEL
Subjt:  VRELKVAKNSEDNREGWERDQNEL

A0A6J1F2C3 NAC domain-containing protein 12-like1.2e-1350Show/hide
Query:  VFWRLRKEEPKTIINTIQILKRKVGLNGGTWSGESKGHKVFSS-ANNAPIGTIKRFHYETSGGVNANDDDCSWIMHEYTLDPTVLTNG
        VF +L+K++ + I        RKVG NGGTWSGES   K+FSS  N+  +GT+KRFHYE +  V  ++++CSWIMHEYT++P ++ NG
Subjt:  VFWRLRKEEPKTIINTIQILKRKVGLNGGTWSGESKGHKVFSS-ANNAPIGTIKRFHYETSGGVNANDDDCSWIMHEYTLDPTVLTNG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGAGGAGCAAGGGTGTTTTGGAGACTAAGAAAAGAAGAGCCTAAAACCATCATCAATACCATTCAAATTCTCAAAAGGAAGGTCGGTCTTAACGGTGGC
ACTTGGAGTGGGGAGAGCAAAGGCCATAAAGTATTTTCTTCTGCTAACAATGCTCCCATCGGTACTATTAAACGTTTTCACTATGAGACTTCTGGAGGAGTGAAT
GCTAATGATGACGATTGTTCCTGGATAATGCATGAATACACACTTGATCCCACCGTCCTAACCAATGGGGTTCGTGAATTGAAAGTTGCAAAAAACTCAGAGGAC
AATAGAGAGGGATGGGAGAGAGATCAGAATGAGCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGATCGGAGGAGCAAGGGTGTTTTGGAGACTAAGAAAAGAAGAGCCTAAAACCATCATCAATACCATTCAAATTCTCAAAAGGAAGGTCGGTCTTAACGGTGGC
ACTTGGAGTGGGGAGAGCAAAGGCCATAAAGTATTTTCTTCTGCTAACAATGCTCCCATCGGTACTATTAAACGTTTTCACTATGAGACTTCTGGAGGAGTGAAT
GCTAATGATGACGATTGTTCCTGGATAATGCATGAATACACACTTGATCCCACCGTCCTAACCAATGGGGTTCGTGAATTGAAAGTTGCAAAAAACTCAGAGGAC
AATAGAGAGGGATGGGAGAGAGATCAGAATGAGCTATGA
Protein sequenceShow/hide protein sequence
MIGGARVFWRLRKEEPKTIINTIQILKRKVGLNGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVNANDDDCSWIMHEYTLDPTVLTNGVRELKVAKNSED
NREGWERDQNEL